Items where Author is "Cooper, Colin"

Article

Smith, Stephanie F. ORCID: https://orcid.org/0000-0001-9290-3773, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Hurst, Rachel and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (2024) Applications of urinary extracellular vesicles in the diagnosis and active surveillance of prostate cancer. Cancers, 16 (9). ISSN 2072-6694

Hurst, Rachel, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Gihawi, Abraham ORCID: https://orcid.org/0000-0002-3676-5561, Wain, John and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (2024) Cancer invasion and anaerobic bacteria: New insights into mechanisms. Journal of Medical Microbiology, 73 (3). ISSN 0022-2615

Woodcock, Dan J., Sahli, Atef, Teslo, Ruxandra, Bhandari, Vinayak, Gruber, Andreas J., Ziubroniewicz, Aleksandra, Gundem, Gunes, Xu, Yaobo, Butler, Adam, Anokian, Ezequiel, Pope, Bernard J., Jung, Chol-Hee, Tarabichi, Maxime, Dentro, Stefan C., Farmery, J. Henry R., Van Loo, Peter, Warren, Anne Y., Gnanapragasam, Vincent, Hamdy, Freddie C., Bova, G. Steven, Foster, Christopher S., Neal, David E., Lu, Yong-Jie, Kote-Jarai, Zsofia, Fraser, Michael, Bristow, Robert G., Boutros, Paul C., Costello, Anthony J., Corcoran, Niall M., Hovens, Christopher M., Massie, Charlie E., Lynch, Andy G., Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Eeles, Rosalind A., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Wedge, David C. (2024) Genomic evolution shapes prostate cancer disease type. Cell Genomics, 4 (3). ISSN 2666-979X

Gihawi, Abraham ORCID: https://orcid.org/0000-0002-3676-5561, Ge, Yuchen, Lu, Jennifer, Puiu, Daniela, Xu, Amanda, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Pertea, Mihaela and Salzberg, Steven L. (2023) Major data analysis errors invalidate cancer microbiome findings. mBIO, 14 (5). ISSN 2150-7511

Gihawi, Abraham ORCID: https://orcid.org/0000-0002-3676-5561, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794 (2023) Caution regarding the specificities of pan-cancer microbial structure. Microbial Genomics, 9 (8). ISSN 2057-5858

Yazbek Hanna, Marcelino, Winterbone, Mark, O'Connell, Shea P., Olivan, Mireia, Hurst, Rachel, Mills, Rob, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794 and Clark, Jeremy (2023) Gene-transcript expression in urine supernatant and urine cell-sediment are different but equally useful for detecting prostate cancer. Cancers, 15 (3). ISSN 2072-6694

Wardale, Lewis, Cardenas, Ryan, Gnanapragasam, Vincent J., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Clark, Jeremy and Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794 (2023) Combining molecular subtypes with multivariable clinical models has the potential to improve prediction of treatment outcomes in prostate cancer at diagnosis. Current Oncology, 30 (1). pp. 157-170. ISSN 1198-0052

Buhigas, Claudia, Warren, Anne Y., Leung, Wing-Kit, Whitaker, Hayley C., Luxton, Hayley J., Hawkins, Steve, Kay, Jonathan, Butler, Adam, Xu, Yaobo, Woodcock, Dan J., Merson, Susan, Frame, Fiona M., Sahli, Atef, Abascal, Federico, Martincorena, Inigo, Bova, G. Steven, Foster, Christopher S., Campbell, Peter, Maitland, Norman J., Neal, David E., Massie, Charlie E., Lynch, Andy G., Eeles, Rosalind A., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Wedge, David C. and Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794 and CRUK-ICGC Prostate Cancer Group (2022) The architecture of clonal expansions in morphologically normal tissue from cancerous and non-cancerous prostates. Molecular Cancer, 21. ISSN 1476-4598

Burns, Daniel, Anokian, Ezequiel, Saunders, Edward J., Bristow, Robert G., Fraser, Michael, Reimand, Jüri, Schlomm, Thorsten, Sauter, Guido, Brors, Benedikt, Korbel, Jan, Weischenfeldt, Joachim, Waszak, Sebastian M., Corcoran, Niall M., Jung, Chol-Hee, Pope, Bernard J., Hovens, Chris M., Cancel-Tassin, Géraldine, Cussenot, Olivier, Loda, Massimo, Sander, Chris, Hayes, Vanessa M., Dalsgaard Sorensen, Karina, Lu, Yong-Jie, Hamdy, Freddie C., Foster, Christopher S., Gnanapragasam, Vincent, Butler, Adam, Lynch, Andy G., Massie, Charlie E., Woodcock, Dan J., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Wedge, David C., Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Kote-Jarai, Zsofia and Eeles, Rosalind A. and CR-UK/Prostate Cancer UK, ICGC, The PPCG (2022) Rare germline variants are associated with rapid biochemical recurrence after radical prostate cancer treatment: a PPCG study. European Urology, 82 (2). pp. 201-211. ISSN 0302-2838

Hurst, Rachel, Meader, Emma, Gihawi, Abraham ORCID: https://orcid.org/0000-0002-3676-5561, Rallapalli, Ghanasyam, Clark, Jeremy, Kay, Gemma L., Webb, Martyn, Manley, Kate, Curley, Helen, Walker, Helen, Kumar, Ravi, Schmidt, Katarzyna, Crossman, Lisa, Eeles, Rosalind A., Wedge, David C., Lynch, Andy G., Massie, Charlie E., Yazbek-Hanna, Marcelino, Rochester, Mark, Mills, Robert D., Mithen, Richard F., Traka, Maria H., Ball, Richard Y., O'Grady, Justin, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Wain, John and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (2022) Microbiomes of urine and the prostate are linked to human prostate cancer risk groups. European Urology Oncology, 5 (4). pp. 412-419. ISSN 2588-9311

Jakobsdottir, G. Maria, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Green, Catherine and Wedge, David C. (2022) APOBEC3 mutational signatures are associated with extensive and diverse genomic instability across multiple tumour types. BMC Biology, 20. ISSN 1741-7007

Connell, Shea, Frantzi, Maria, Latosinska, Agnieszka, Webb, Martyn, Mullen, William, Pejchinovski, Martin, Salji, Mark, Mischak, Harald, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Clark, Jeremy and Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794 (2022) A model to detect significant prostate cancer integrating urinary peptide and extracellular vesicle RNA data. Cancers, 14 (8). ISSN 2072-6694

Ball, Richard, Cardenas, Ryan, Winterbone, Mark, Yazbek Hanna, Marcelino, Parker, Christopher C., Hurst, Rachel, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, D'Sa, Lauren, Mills, Robert, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Clark, Jeremy (2021) The urine biomarker PUR-4 is positively associated with the amount of Gleason 4 in human prostate cancers. Life, 11 (11). ISSN 2075-1729

Connell, Shea P., Mills, Robert, Pandha, Hardev, Morgan, Richard, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Clark, Jeremy and Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794 (2021) Integration of urinary EN2 protein & cell-free RNA data in the development of a multivariable risk model for the detection of prostate cancer prior to biopsy. Cancers, 13 (9). ISSN 2072-6694

Luca, Bogdan, Moulton, Vincent ORCID: https://orcid.org/0000-0001-9371-6435, Ellis, Christopher, Connell, Shea P., Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794 and Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 (2020) Convergence of prognostic gene signatures suggests underlying mechanisms of human prostate cancer progression. Genes, 11 (7). ISSN 2073-4425

Connell, Shea P, O'Reilly, Eve, Tuzova, Alexandra, Webb, Martyn, Hurst, Rachel, Mills, Robert, Zhao, Fang, Bapat, Bharati, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Perry, Antoinette, Clark, Jeremy and Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794 (2020) Development of a multivariable risk model integrating urinary cell DNA methylation and cell-free RNA data for the detection of significant prostate cancer. The Prostate, 80 (7). pp. 547-558. ISSN 0270-4137

Luca, Bogdan, Moulton, Vincent ORCID: https://orcid.org/0000-0001-9371-6435, Ellis, Christopher, Edwards, Dylan R. ORCID: https://orcid.org/0000-0002-3292-2064, Campbell, Colin, Cooper, Rosalin A., Clark, Jeremy, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794 and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (2020) A novel stratification framework for predicting outcome in patients with prostate cancer. British Journal of Cancer, 122 (10). 1467–1476. ISSN 0007-0920

Zapatka, Marc, Borozan, Ivan, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Iskar, Murat, Grundhoff, Adam, Alawi, Malik, Desai, Nikita, Sültmann, Holger, Moch, Holger, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Eils, Roland, Ferretti, Vincent and Lichter, Peter (2020) The landscape of viral associations in human cancers. Nature Genetics, 52 (3). 320–330. ISSN 1061-4036

Gihawi, Abraham ORCID: https://orcid.org/0000-0002-3676-5561, Rallapalli, Ghanasyam, Hurst, Rachel, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Leggett, Richard M. and Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794 (2019) SEPATH: Benchmarking the search for pathogens in human tissue whole genome sequence data leads to template pipelines. Genome Biology, 20. ISSN 1474-760X

Magiorkinis, Gkikas, Matthews, Philippa C., Wallace, Susan E., Jeffery, Katie, Dunbar, Kevin, Tedder, Richard, Mbisa, Jean L., Hannigan, Bernadette, Vayena, Effy, Simmonds, Peter, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Gihawi, Abraham ORCID: https://orcid.org/0000-0002-3676-5561, Rallapalli, Ghanasyam, Lahnstein, Lea, Fowler, Tom, Patch, Christine, Maleady-Crowe, Fiona, Lucassen, Anneke and Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 (2019) Potential for diagnosis of infectious disease from the 100,000 Genomes Project Metagenomic Dataset: Recommendations for reporting results. Wellcome Open Research, 4.

Connell, Shea P., Yazbek Hanna, Marcelino, McCarthy, Frank, Hurst, Rachel, Webb, Martyn, Curley, Helen, Walker, Helen, Mills, Robert, Ball, Richard, Sanda, Martin, Pellegrini, Kathryn, Patil, Dattatraya, Perry, Antoinette, Schalken, Jack, Pandha, Hardev, Whitaker, Hayley C, Dennis, Nening, Stuttle, Christine, Mills, Ian, Guldvik, Ingrid, Parker, Christopher C., Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Clark, Jeremy (2019) A four-group urine risk classifier for predicting outcome in prostate cancer patients. BJU International, 124 (4). pp. 609-620. ISSN 1464-4096

Traka, Maria H, Melchini, Antonietta, Coode-Bate, Jack, Al Kadhi, Omar, Saha, Shikha, Defernez, Marianne, Troncoso-Rey, Perla, Kibblewhite, Helen, O'Neill, Carmel M, Bernuzzi, Federico, Mythen, Laura, Hughes, Jackie, Needs, Paul W, Dainty, Jack R ORCID: https://orcid.org/0000-0002-0056-1233, Savva, George M, Mills, Robert D, Ball, Richard Y, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 and Mithen, Richard F (2019) Transcriptional changes in prostate of men on active surveillance after a 12-mo glucoraphanin-rich broccoli intervention—results from the Effect of Sulforaphane on prostate CAncer PrEvention (ESCAPE) randomized controlled trial. The American Journal of Clinical Nutrition, 109 (4). pp. 1133-1144. ISSN 0002-9165

O'Reilly, Eve, Tuzova, Alexandra, Walsh, Anna, Russell, Niamh, O’Brien, Odharnaith, Kelly, Sarah, Dhomhnallain, Odharna, DeBarra, Liam, Dale, Connie, Brugman, Rick, Clarke, Gavin, Schmidt, Olivia, O'Meachair, Shane, Patil, Dattatraya, Pellegrini, Kathryn, Fleshner, Neil, Garcia, Julia, Zhao, Fang, Finn, Stephen, Mills, Robert, Y. Hanna, Marcelino, Hurst, Rachel, McEvoy, Elizabeth, Gallagher, William, Manecksha, Rustom, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Bapat, Bharati, Sanda, Martin, Clark, Jeremy and Perry, Antoinette (2019) epiCaPture: a urine DNA methylation test for early detection of aggressive prostate cancer. JCO Precision Oncology, 3 (3). pp. 1-18. ISSN 2473-4284

Webb, Martyn, Manley, Kate, Olivan, Mireia, Guldvik, Ingrid, Palczynska, Malgorzata, Hurst, Rachel, Connell, Shea P, Mills, Ian, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Mills, Robert, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Clark, Jeremy (2019) Methodology for the at-home collection of urine samples for prostate cancer detection. Biotechniques, 68 (2). pp. 65-71. ISSN 0736-6205

Luca, Bogdan-Alexandru, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Edwards, Dylan R. ORCID: https://orcid.org/0000-0002-3292-2064, Edward, Sandra, Whitaker, Hayley C., Merson, Sue, Denis, Nening, Cooper, Rosalin A., Hazell, Steven, Warren, Anne Y., Eeles, Rosalind, Lynch, Andy G., Ross-Adams, Helen, Lamb, Alastair D., Neal, David E., Sethia, Krishna, Mills, Robert D, Ball, Richard Y., Curley, Helen, Clark, Jeremy, Moulton, Vincent ORCID: https://orcid.org/0000-0001-9371-6435 and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and The CancerMap Group (2018) DESNT: a poor prognosis category of human prostate cancer. European Urology Focus, 4 (6). pp. 842-850. ISSN 2405-4569

Zhao, Fang, Olkhov-Mitsel, Ekaterina, Kamdar, Shivani, Jeyapala, Renu, Garcia, Julia, Hurst, Rachel, Yazbek Hanna, Marcelino, Mills, Robert, Tuzova, Alexandra, O'Reilly, Eve, Kelly, Sarah, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Perry, Antoinette, Clark, Jeremy, Fleshner, Neil and Bapat, Bharati (2018) A urine based DNA methylation Assay, ProCUrE, to identify clinically significant prostate cancer. Clinical Epigenetics, 10. ISSN 1868-7075

Wedge, David C., Gundem, Gunes, Mitchell, Thomas, Woodcock, Dan J., Martincorena, Inigo, Ghori, Mohammed, Zamora, Jorge, Butler, Adam, Whitaker, Hayley, Kote-Jarai, Zsofia, Alexandrov, Ludmil B., Van Loo, Peter, Massie, Charlie E., Dentro, Stefan, Warren, Anne Y., Verrill, Clare, Berney, Dan M., Dennis, Nening, Merson, Sue, Hawkins, Steve, Howat, William, Lu, Yong-Jie, Lambert, Adam, Kay, Jonathan, Kremeyer, Barbara, Karaszi, Katalin, Luxton, Hayley, Camacho, Niedzica, Marsden, Luke, Edwards, Sandra, Matthews, Lucy, Bo, Valeria, Leongamornlert, Daniel, McLaren, Stuart, Ng, Anthony, Yu, Yongwei, Zhang, Hongwei, Dadaev, Tokhir, Thomas, Sarah, Easton, Douglas F., Ahmed, Mahbubl, Bancroft, Elizabeth, Fisher, Cyril, Livni, Naomi, Nicol, David, Tavaré, Simon, Gill, Pelvender, Greenman, Christopher, Khoo, Vincent, Van As, Nicholas, Kumar, Pardeep, Ogden, Christopher, Cahill, Declan, Thompson, Alan, Mayer, Erik, Rowe, Edward, Dudderidge, Tim, Gnanapragasam, Vincent, Shah, Nimish C., Raine, Keiran, Jones, David, Menzies, Andrew, Stebbings, Lucy, Teague, Jon, Hazell, Steven, Corbishley, Cathy, de Bono, Johann, Attard, Gerhardt, Isaacs, William, Visakorpi, Tapio, Fraser, Michael, Boutros, Paul C., Bristow, Robert G., Workman, Paul, Sander, Chris, Hamdy, Freddie C., Futreal, Andrew, McDermott, Ultan, Al-Lazikani, Bissan, Lynch, Andrew G., Bova, G. Steven, Foster, Christopher S., Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Neal, David E., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Eeles, Rosalind A. (2018) Sequencing of prostate cancers identifies new cancer genes, routes of progression and drug targets. Nature Genetics, 50. 682–692. ISSN 1061-4036

Alshaker, Heba, Wang, Qi, Srivats, Shyam, Chao, Yimin ORCID: https://orcid.org/0000-0002-8488-2690, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Pchejetski, Dmitri (2017) New FTY720-docetaxel nanoparticle therapy overcomes FTY720-induced lymphopenia and inhibits metastatic breast tumour growth. Breast Cancer Research and Treatment, 165 (3). 531–543. ISSN 0167-6806

Camacho, Niedzica, Van Loo, Peter, Edwards, Sandra, Kay, Jonathan, Matthews, Lucy, Haase, Kerstin, Clark, Jeremy, Dennis, Nening, Thomas, Sarah, Kremeyer, Barbara, Zamora, Jorge, Butler, Adam P., Gundem, Gunes, Merson, Sue, Luxton, Hayley, Hawkins, Steve, Ghori, Mohammed, Marsden, Luke, Lambert, Adam, Karaszi, Katalin, Pelvender, Gill, Massie, Charlie, Kote-Jarai, ZSofia, Raine, Keiran, Jones, David, Howat, William, Hazell, Steven, Livni, Naomi, Fisher, Cyril, Ogden, Christopher, Kumar, Pardeep, Thompson, Alan, Nicol, David, Mayer, Erik, Dudderidge, Tim, Yu, Yongwei, Zhang, Hongwei, Shah, Nimish, Gnanapragasam, Vincent, Isaacs, William, Visakorpi, Tapio, Hamdy, Freddie, Berney, Dan, Verrill, Clare, Warren, Anne, Wedge, David, Lynch, Andrew, Foster, Christopher, Lu, Yong Jie, Bova, G. Steven, Whitaker, Hayley, McDermott, Ultan, Neal, David, Eeles, Rosalind, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794 (2017) Appraising the relevance of DNA copy number loss and gain in prostate cancer using whole genome DNA sequence data. PLoS Genetics, 13 (9). ISSN 1553-7390

Wang, Qi, Alshaker, Heba, Böhler, Torsten, Srivats, Shyam, Chao, Yimin ORCID: https://orcid.org/0000-0002-8488-2690, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Pchejetski, Dmitri (2017) Core shell lipid-polymer hybrid nanoparticles with combined docetaxel and molecular targeted therapy for the treatment of metastatic prostate cancer. Scientific Reports, 7. ISSN 2045-2322

Stankiewicz, Elzbieta, Mao, Xueying, Mangham, D. Chas, Xu, Lei, Yeste-Velasco, Marc, Fisher, Gabrielle, North, Bernard, Chaplin, Tracy, Young, Bryan, Wang, Yuqin, Kaur Bansal, Jasmin, Kudahetti, Sakunthala, Spencer, Lucy, Foster, Christopher S., Møller, Henrik, Scardino, Peter, Oliver, R. Tim, Shamash, Jonathan, Cuzick, Jack, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Berney, Daniel M. and Lu, Yong-Jie (2017) Identification of FBXL4 as a metastasis associated gene in prostate cancer. Scientific Reports, 7. ISSN 2045-2322

Pellegrini, Kathryn L., Patil, Dattatraya, Douglas, Kristen J.S., Lee, Grace, Wehrmeyer, Kathryn, Torlak, Mersiha, Clark, Jeremy, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Moreno, Carlos S. and Sanda, Martin G. (2017) Detection of prostate cancer-specific transcripts in extracellular vesicles isolated from post-DRE urine. The Prostate, 77 (9). pp. 990-999. ISSN 0270-4137

Luedeke, Manuel, Rinckleb, Antje E., Fitzgerald, Liesel M., Geybels, Milan S., Schleutker, Johanna, Eeles, Rosalind A., Teixeira, Manuel R., Cannon-Albright, Lisa, Ostrander, Elaine A., Weikert, Steffen, Herkommer, Kathleen, Wahlfors, Tiina, Visakorpi, Tapio, Leinonen, Katri A., Tammela, Teuvo L. J., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Kote-Jarai, Zsofia, Edwards, Sandra, Goh, Chee L., McCarthy, Frank, Parker, Chris, Flohr, Penny, Paulo, Paula, Jerónimo, Carmen, Henrique, Rui, Krause, Hans, Wach, Sven, Lieb, Verena, Rau, Tilman T., Vogel, Walther, Kuefer, Rainer, Hofer, Matthias D., Perner, Sven, Rubin, Mark A., Agarwal, Archana M., Easton, Doug F., Amin Al Olama, Ali, Benlloch, Sara, Hoegel, Josef, Stanford, Janet L and Maier, Christiane and The PRACTICAL consortium (2016) Prostate cancer risk regions at 8q24 and 17q24 are differentially associated with somatic TMPRSS2:ERG fusion status. Human Molecular Genetics, 25 (24). pp. 5490-5499. ISSN 0964-6906

Alshaker, Heba, Wang, Qi, Kawano, Yoshiaki, Arafat, Tawfiq, Böhler, Torsten, Winkler, Mathias, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Pchejetski, Dmitri (2016) Everolimus (RAD001) sensitizes prostate cancer cells to docetaxel by down-regulation of HIF-1α and sphingosine kinase 1. Oncotarget, 7 (49). pp. 80943-80956. ISSN 1949-2553

Behjati, Sam, Gundem, Gunes, Wedge, David C., Roberts, Nicola D., Tarpey, Patrick S., Cooke, Susanna L., Van Loo, Peter, Alexandrov, Ludmil B., Ramakrishna, Manasa, Davies, Helen, Nik-Zainal, Serena, Hardy, Claire, Latimer, Calli, Raine, Keiran M., Stebbings, Lucy, Menzies, Andy, Jones, David, Shepherd, Rebecca, Butler, Adam P., Teague, Jon W., Jorgensen, Mette, Khatri, Bhavisha, Pillay, Nischalan, Shlien, Adam, Futreal, P. Andrew, Badie, Christophe, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Eeles, Rosalind A., Easton, Douglas, Foster, Christopher, Neal, David E., Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794, Hamdy, Freddie, Lu, Yong-Jie, Lynch, Andrew G., Massi, Charlie E., Ng, Anthony, Whitaker, Hayley C., Yu, Yongwei, Zhang, Hongwei, Bancroft, Elizabeth, Berney, Dan, Camacho, Niedzica, Corbishley, Cathy, Dadaev, Tokhir, Dennis, Nening, Dudderidge, Tim, Edwards, Sandra, Fisher, Cyril, Ghori, Jilur, Gnanapragasam, Vincent J., Greenman, Christopher, Hawkins, Steve, Hazell, Steven, Howat, Will, Karaszi, Katalin, Kay, Jonathan, Kote-Jarai, Zsofia, Kremeyer, Barbara, Kumar, Pardeep, Lambert, Adam, Leongamornlert, Daniel, Livni, Naomi, Luxton, Hayley, Matthews, Lucy, Mayer, Erik, Merson, Susan, Nicol, David, Ogden, Christopher, O'Meara, Sarah, Pelvender, Gill, Shah, Nimish C., Tavare, Simon, Thomas, Sarah, Thompson, Alan, Verrill, Claire, Warren, Anne, Zamora, Jorge, McDermott, Ultan, Bova, G. Steven, Richardson, Andrea L., Flanagan, Adrienne M., Stratton, Michael R. and Campbell, Peter J. (2016) Mutational signatures of ionizing radiation in second malignancies. Nature Communications, 7. ISSN 2041-1723

Pal, Raj P., Kockelbergh, Roger C., Pringle, John Howard, Cresswell, Lara, Hew, Roger, Dormer, John P., Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Mellon, John Kilian, Barwell, Julian G. and Hollox, Edward J. (2016) Immunocytochemical detection of ERG expression in exfoliated urinary cells identifies with high specificity patients with prostate cancer. BJU International, 117 (4). pp. 686-696. ISSN 1464-4096

White, Christopher, Alshaker, Heba, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Winkler, Matthias and Pchejetski, Dmitri (2016) The emerging role of FTY720 (Fingolimod) in cancer treatment. Oncotarget, 7 (17). pp. 23106-23127. ISSN 1949-2553

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Clark, Jeremy, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794 and Edwards, Dylan R. ORCID: https://orcid.org/0000-0002-3292-2064 (2016) Prostate single nucleotide polymorphism provides a crucial clue to cancer aggression in active surveillance patients. European Urology, 69 (2). pp. 229-230. ISSN 0302-2838

Ross-Adams, H., Lamb, A. D., Dunning, M. J., Halim, S., Lindberg, J., Massie, C. M., Egevad, L. A., Russell, R., Ramos-Montoya, A., Vowler, S. L., Sharma, N. L., Kay, J., Whitaker, H., Clark, J., Hurst, R., Gnanapragasam, V. J., Shah, N. C., Warren, A. Y., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Lynch, A. G., Stark, R., Mills, I. G., Groenberg, H. and Neal, D. E. (2015) Integration of copy number and transcriptomics provides risk stratification in prostate cancer: A discovery and validation cohort study. EBioMedicine, 2 (9). 1133–1144.

Boutros, Paul C., Fraser, Michael, Harding, Nicholas J., De Borja, Richard, Trudel, Dominique, Lalonde, Emilie, Meng, Alice, Hennings-Yeomans, Pablo H., McPherson, Andrew, Sabelnykova, Veronica Y., Zia, Amin, Fox, Natalie S., Livingstone, Julie, Shiah, Yu-jia, Wang, Jianxin, Beck, Timothy A., Have, Cherry L., Chong, Taryne, Sam, Michelle, Johns, Jeremy, Timms, Lee, Buchner, Nicholas, Wong, Ada, Watson, John D., Simmons, Trent T., P'ng, Christine, Zafarana, Gaetano, Nguyen, Francis, Luo, Xuemei, Chu, Kenneth C., Prokopec, Stephenie D., Sykes, Jenna, Dal Pra, Alan, Berlin, Alejandro, Brown, Andrew, Chan-seng-yue, Michelle A., Yousif, Fouad, Denroche, Robert E., Chong, Lauren C., Chen, Gregory M., Jung, Esther, Fung, Clement, Starmans, Maud H. W., Chen, Hanbo, Govind, Shaylan K., Hawley, James, D'Costa, Alister, Pintilie, Melania, Waggott, Daryl, Hach, Faraz, Lambin, Philippe, Muthuswamy, Lakshmi B., Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Eeles, Rosalind, Neal, David, Tetu, Bernard, Sahinalp, Cenk, Stein, Lincoln D., Fleshner, Neil, Shah, Sohrab P., Collins, Colin C., Hudson, Thomas J., Mcpherson, John D., van der Kwast, Theodorus and Bristow, Robert G. (2015) Spatial genomic heterogeneity within localized, multifocal prostate cancer. Nature Genetics, 47 (7). 736–745. ISSN 1061-4036

Ju, Young Seok, Tubio, Jose M. C., Mifsud, William, Fu, Beiyuan, Davies, Helen R., Ramakrishna, Manasa, Li, Yilong, Yates, Lucy, Gundem, Gunes, Tarpey, Patrick S., Behjati, Sam, Papaemmanuil, Elli, Martin, Sancha, Fullam, Anthony, Gerstung, Moritz, Nangalia, Jyoti, Green, Anthony R., Caldas, Carlos, Borg, Åke, Tutt, Andrew, Lee, Ming Ta Michael, van'T Veer, Laura J., Tan, Benita K. T., Aparicio, Samuel, Span, Paul N., Martens, John W. M., Knappskog, Stian, Vincent-Salomon, Anne, Børresen-Dale, Anne-Lise, Eyfjörd, Jórunn Erla, Myklebost, Ola, Flanagan, Adrienne M., Foster, Christopher, Neal, David E., Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Eeles, Rosalind, Bova, G. Steven, Lakhani, Sunil R., Desmedt, Christine, Thomas, Gilles, Richardson, Andrea L., Purdie, Colin A., Thompson, Alastair M., McDermott, Ultan, Yang, Fengtang, Nik-Zainal, Serena, Campbell, Peter J. and Stratton, Michael R. and ICGC Prostate Cancer Working Group, ICGC Bone Cancer Working Group, ICGC Breast Cancer Working Group (2015) Frequent somatic transfer of mitochondrial DNA into the nuclear genome of human cancer cells. Genome Research, 25 (6). pp. 814-824. ISSN 1088-9051

Gundem, Gunes, Van Loo, Peter, Kremeyer, Barbara, Alexandrov, Ludmil B., Tubio, Jose M. C., Papaemmanuil, Elli, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Kallio, Heini, Högnäs, Högnäs, Annala, Matti, Kivinummi, Kati, Goody, Victoria, Latimer, Calli, O'Meara, Sarah, Dawson, Kevin, Isaacs, William, Emmert-Buck, Michael R., Nykter, Matti, Foster, Christopher S., Kote-Jarai, Zsofia, Easton, Douglas F., Whitaker, Hayley C., Neal, David E., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Eeles, Rosalind A., Visakorpi, Tapio, Campbell, Peter, McDermott, Ultan, Wedge, David C. and Bova, G. Steven and ICGC Prostate UK Group* (2015) The evolutionary history of lethal metastatic prostate cancer. Nature, 520 (7547). 353–357. ISSN 1476-4687

Massie, Charlie E., Spiteri, Inmaculada, Ross-Adams, Helen, Luxton, Hayley J., Kay, Jonathan, Whitaker, Hayley C., Dunning, Mark J., Lamb, Alastair D., Ramos-Montoya, Antonio, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Eeles, Rosalind A., Warren, Anne Y., Tavaré, Simon, Neal, David E. and Lynch, Andy G. (2015) HES5 silencing is an early and recurrent change in prostate tumourigenesis. Endocrine-Related Cancer (ERC), 22 (2). pp. 131-144. ISSN 1351-0088

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Eeles, Rosalind A., Wedge, David C., Van Loo, Peter, Gundem, Gunes, Alexandrov, Ludmil B., Kreymer, Barbara, Butler, Adam, Lynch, Andrew, Edwards, Sandra E., Camacho, Niedzica, Massie, Charlie E., Kote-Jarai, Zsofia, Dennis, Nening, Merson, Sue, Leongamornlert, Daniel A., Zamora, Jorge, Kay, Jonathan, Luxton, Hayley J., Corbishley, Cathy, Thomas, Sarah, Nik-Zainal, Serena, Ramakrishna, Manasa, O'Meara, Sarah, Matthews, Lucy, Clark, Jeremy, Hurst, Rachel, Mithen, Richard, Bristow, Robert G., Boutros, Paul C., Fraser, Michael, Cooke, Susanna, Raine, Keiran, Jones, David, Menzies, Andrew, Stebbings, Lucy, Hinton, Jon, Teague, Jon, McLaren, Stuart, Mudie, Laura, Hardy, Claire, Anderson, Elizabeth, Joseph, Olivia, Goody, Victoria, Robinson, Ben, Maddison, Mark, Gamble, Stephen J., Greenman, Christopher, Berney, Dan, Hazell, Steven, Livni, Naomi, Fisher, Cyril, Ogden, Christopher, Kumar, Pardeep, Thompson, Alan, Woodhouse, Christopher J., Nicol, David, Mayer, Erik, Dudderidge, Tim, Shah, Nimish, Gnanapragasam, Vincent, Voet, Thierry, Campbell, Peter, Futreal, P. Andrew, Easton, Douglas F., Warren, Anne Y., Foster, Christopher S., Stratton, Michael R., Whitaker, Hayley C., McDermott, Ultan, Brewer, Daniel S. ORCID: https://orcid.org/0000-0003-4753-9794 and Neal, David E. and the ICGC Prostate Group (2015) Analysis of the genetic phylogeny of multifocal prostate cancer identifies multiple independent clonal expansions in neoplastic and morphologically normal prostate tissue. Nature Genetics, 47. 367–372. ISSN 1061-4036

Alshaker, Heba, Wang, Qi, Frampton, Adam E., Krell, Jonathan, Waxman, Jonathan, Winkler, Mathias, Stebbing, Justin, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Yaguee, Ernesto and Pchejetski, Dmitri (2015) Sphingosine kinase 1 contributes to leptin-induced STAT3 phosphorylation through IL-6/gp130 transactivation in oestrogen receptor-negative breast cancer. Breast Cancer Research and Treatment, 149 (1). pp. 59-67. ISSN 1573-7217

Alshaker, Heba, Krell, Jonathan, Frampton, Adam E., Wang, Qi, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Winkler, Mathias, Yaguee, Ernesto, Pchejetski, Dmitri and Alshaker, Heba (2015) Leptin receptor-dependent and -independent STAT3 phosphorylation in oestrogen receptor-negative breast cancer. International Journal of Molecular Medicine, 36. S6. ISSN 1107-3756

Bettencourt-Silva, Joao H., Clark, Jeremy, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Mills, Robert, Rayward-Smith, Victor J. and De La Iglesia, Beatriz ORCID: https://orcid.org/0000-0003-2675-5826 (2015) Building data-driven pathways from routinely collected hospital data: A case study on prostate cancer. JMIR Medical Informatics, 3 (3). ISSN 2291-9694

Manson-Bahr, David, Ball, Richard, Gundem, Gunes, Mills, Robert, Rochester, Mark, Goody, Victoria, O'Meara, Sarah, Flather, Marcus, Keeling, Matthew, Yazbek Hanna, Marcelino, Hurst, Rachel, Curley, Helen, Clark, Jeremy, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Mcdermott, Ultan and Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 (2015) Mutation detection in formalin-fixed prostate cancer biopsies taken at the time of diagnosis using next generation DNA sequencing. Journal of Clinical Pathology, 68. pp. 212-217. ISSN 0021-9746

Lalonde, Emilie, Ishkanian, Adrian S., Sykes, Jenna, Fraser, Michael, Ross-Adams, Helen, Erho, Nicholas, Dunning, Mark J., Halim, Silvia, Lamb, Alastair D., Moon, Nathalie C., Zafarana, Gaetano, Warren, Anne Y., Meng, Xianyue, Thoms, John, Grzadkowski, Michal R., Berlin, Alejandro, Have, Cherry L., Ramnarine, Varune R., Yao, Cindy Q., Malloff, Chad A., Lam, Lucia L., Xie, Honglei, Harding, Nicholas J., Mak, Denise Y. F., Chu, Kenneth C., Chong, Lauren C., Sendorek, Dorota H., P'ng, Christine, Collins, Colin C., Squire, Jeremy A., Jurisica, Igor, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Eeles, Rosalind, Pintilie, Melania, Dal Pra, Alan, Davicioni, Elai, Lam, Wan L., Milosevic, Michael, Neal, David E., van der Kwast, Theodorus, Boutros, Paul C. and Bristow, Robert G. (2014) Tumour genomic and microenvironmental heterogeneity as integrated predictors for prostate cancer recurrence: a retrospective study. The Lancet Oncology, 15 (13). 1521–1532. ISSN 1470-2045

Zuo, Jie, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Arlt, Volker M, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Phillips, David H (2014) Benzo[a]pyrene-induced DNA adducts and gene expression profiles in target and non-target organs for carcinogenesis in mice. BMC Genomics, 15. ISSN 1471-2164

Ju, Young Seok, Alexandrov, Ludmil B., Gerstung, Moritz, Martincorena, Inigo, Nik-Zainal, Serena, Ramakrishna, Manasa, Davies, Helen R., Papaemmanuil, Elli, Gundem, Gunes, Shlien, Adam, Bolli, Niccolo, Behjati, Sam, Tarpey, Patrick S., Nangalia, Jyoti, Massie, Charles E., Butler, Adam P., Teague, Jon W., Vassiliou, George S., Green, Anthony R., Du, Ming-Qing, Unnikrishnan, Ashwin, Pimanda, John E., Teh, Bin Tean, Munshi, Nikhil, Greaves, Mel, Vyas, Paresh, El-Naggar, Adel K., Santarius, Tom, Collins, V. Peter, Grundy, Richard, Taylor, Jack A., Hayes, D. Neil, Malkin, David, Foster, Christopher S., Warren, Anne Y., Whitaker, Hayley C., Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Eeles, Rosalind, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Neal, David, Visakorpi, Tapio, Isaacs, William B., Bova, G. Steven, Flanagan, Adrienne M., Futreal, P. Andrew, Lynch, Andy G., Chinnery, Patrick F., McDermott, Ultan, Stratton, Michael R. and Campbell, Peter J. and ICGC Breast Cancer Group (2014) Origins and functional consequences of somatic mitochondrial DNA mutations in human cancer. eLife, 3. ISSN 2050-084X

Tubio, Jose M. C., Li, Yilong, Ju, Young Seok, Martincorena, Inigo, Cooke, Susanna L., Tojo, Marta, Gundem, Gunes, Pipinikas, Christodoulos P., Zamora, Jorge, Raine, Keiran, Menzies, Andrew, Roman-Garcia, Pablo, Fullam, Anthony, Gerstung, Moritz, Shlien, Adam, Tarpey, Patrick S., Papaemmanuil, Elli, Knappskog, Stian, Van Loo, Peter, Ramakrishna, Manasa, Davies, Helen R., Marshall, John, Wedge, David C., Teague, Jon W., Butler, Adam P., Nik-Zainal, Serena, Alexandrov, Ludmil, Behjati, Sam, Yates, Lucy R., Bolli, Niccolo, Mudie, Laura, Hardy, Claire, Martin, Sancha, McLaren, Stuart, O'Meara, Sarah, Anderson, Elizabeth, Maddison, Mark, Gamble, Stephen, Foster, Christopher, Warren, Anne Y., Whitaker, Hayley, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Eeles, Rosalind, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Neal, David, Lynch, Andy G., Visakorpi, Tapio, Isaacs, William B., van't Veer, Laura and Caldas, Carlos and ICGC Breast Cancer Group (2014) Mobile DNA in cancer. Extensive transduction of nonrepetitive DNA mediated by L1 retrotransposition in cancer genomes. Science, 345 (6196). ISSN 0036-8075

Merson, S, Yang, Z H, Brewer, D ORCID: https://orcid.org/0000-0003-4753-9794, Olmos, D, Eichholz, A, McCarthy, F, Fisher, G, Kovacs, G, Berney, D M, Foster, C S, Møller, H, Scardino, P, Cuzick, J, Cooper, C S ORCID: https://orcid.org/0000-0003-2013-8042 and Clark, Jeremy and Transatlantic Prostate Group (2014) Focal amplification of the androgen receptor gene in hormone-naive human prostate cancer. British Journal of Cancer, 110 (6). pp. 1655-1662. ISSN 0007-0920

Cooper, Colin A ORCID: https://orcid.org/0000-0003-2013-8042, Mulder, David T, Allison, Sarah E, Pilar, Ana Victoria C and Coombes, Brian K (2013) The SseC translocon component in Salmonella enterica serovar Typhimurium is chaperoned by SscA. BMC Microbiology, 13.

Tomljenovic-Berube, Ana M, Henriksbo, Brandyn, Porwollik, Steffen, Cooper, Colin A ORCID: https://orcid.org/0000-0003-2013-8042, Tuinema, Brian R, McClelland, Michael and Coombes, Brian K (2013) Mapping and regulation of genes within Salmonella pathogenicity island 12 that contribute to in vivo fitness of Salmonella enterica Serovar Typhimurium. Infection and Immunity, 81 (7). pp. 2394-404. ISSN 0019-9567

Cuzick, J, Yang, Z H, Fisher, G, Tikishvili, E, Stone, S, Lanchbury, J S, Camacho, N, Merson, S, Brewer, D ORCID: https://orcid.org/0000-0003-4753-9794, Cooper, C S ORCID: https://orcid.org/0000-0003-2013-8042, Clark, J, Berney, D M, Møller, H, Scardino, P and Sangale, Z and Transatlantic Prostate Group (2013) Prognostic value of PTEN loss in men with conservatively managed localised prostate cancer. British Journal of Cancer, 108 (12). pp. 2582-2589. ISSN 0007-0920

Eeles, Rosalind A, Olama, Ali Amin Al, Benlloch, Sara, Saunders, Edward J, Leongamornlert, Daniel A, Tymrakiewicz, Malgorzata, Ghoussaini, Maya, Luccarini, Craig, Dennis, Joe, Jugurnauth-Little, Sarah, Dadaev, Tokhir, Neal, David E, Hamdy, Freddie C, Donovan, Jenny L, Muir, Ken, Giles, Graham G, Severi, Gianluca, Wiklund, Fredrik, Gronberg, Henrik, Haiman, Christopher A, Schumacher, Fredrick, Henderson, Brian E, Le Marchand, Loic, Lindstrom, Sara, Kraft, Peter, Hunter, David J, Gapstur, Susan, Chanock, Stephen J, Berndt, Sonja I, Albanes, Demetrius, Andriole, Gerald, Schleutker, Johanna, Weischer, Maren, Canzian, Federico, Riboli, Elio, Key, Tim J, Travis, Ruth C, Campa, Daniele, Ingles, Sue A, John, Esther M, Hayes, Richard B, Pharoah, Paul D P, Pashayan, Nora, Khaw, Kay-Tee, Stanford, Janet L, Ostrander, Elaine A, Signorello, Lisa B, Thibodeau, Stephen N, Schaid, Dan and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 and COGS–Cancer Research UK GWAS–ELLIPSE (part of GAME-ON) Initiative (2013) Identification of 23 new prostate cancer susceptibility loci using the iCOGS custom genotyping array. Nature Genetics, 45 (4). 385-91, 391e1-2. ISSN 1061-4036

Ahmad, I., Singh, L. B., Yang, Z. H., Kalna, G., Fleming, J., Fisher, G., Cooper, C. ORCID: https://orcid.org/0000-0003-2013-8042, Cuzick, J., Berney, D. M., Møller, H., Scardino, P. and Leung, H. Y. (2013) Mir143 expression inversely correlates with nuclear ERK5 immunoreactivity in clinical prostate cancer. British Journal of Cancer, 108 (1). pp. 149-154. ISSN 0007-0920

Amin Al Olama, Ali, Kote-Jarai, Zsofia, Schumacher, Fredrick R, Wiklund, Fredrik, Berndt, Sonja I, Benlloch, Sara, Giles, Graham G, Severi, Gianluca, Neal, David E, Hamdy, Freddie C, Donovan, Jenny L, Hunter, David J, Henderson, Brian E, Thun, Michael J, Gaziano, Michael, Giovannucci, Edward L, Siddiq, Afshan, Travis, Ruth C, Cox, David G, Canzian, Federico, Riboli, Elio, Key, Timothy J, Andriole, Gerald, Albanes, Demetrius, Hayes, Richard B, Schleutker, Johanna, Auvinen, Anssi, Tammela, Teuvo L J, Weischer, Maren, Stanford, Janet L, Ostrander, Elaine A, Cybulski, Cezary, Lubinski, Jan, Thibodeau, Stephen N, Schaid, Daniel J, Sorensen, Karina D, Batra, Jyotsna, Clements, Judith A, Chambers, Suzanne, Aitken, Joanne, Gardiner, Robert A, Maier, Christiane, Vogel, Walther, Dörk, Thilo, Brenner, Hermann, Habuchi, Tomonori, Ingles, Sue, John, Esther M, Dickinson, Joanne L and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 and UK Genetic Prostate Cancer Study Collaborators/British Association of Urological Surgeons' Section of Oncology (2013) A meta-analysis of genome-wide association studies to identify prostate cancer susceptibility loci associated with aggressive and non-aggressive disease. Human Molecular Genetics, 22 (2). pp. 408-415. ISSN 0964-6906

Pilar, Ana Victoria C, Reid-Yu, Sarah A, Cooper, Colin A ORCID: https://orcid.org/0000-0003-2013-8042, Mulder, David T and Coombes, Brian K (2013) Active modification of host inflammation by Salmonella. Gut Microbes, 4 (2). pp. 140-5. ISSN 1949-0976

Rigau, Marina, Olivan, Mireia, Garcia, Marta, Sequeiros, Tamara, Montes, Melania, Colás, Eva, Llauradó, Marta, Planas, Jacques, Torres, Inés de, Morote, Juan, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Reventós, Jaume, Clark, Jeremy and Doll, Andreas (2013) The present and future of prostate cancer urine biomarkers. International Journal of Molecular Sciences, 14 (6). pp. 12620-49. ISSN 1422-0067

Olmos, David, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Clark, Jeremy, Danila, Daniel C, Parker, Chris, Attard, Gerhardt, Fleisher, Martin, Reid, Alison Hm, Castro, Elena, Sandhu, Shahneen K, Barwell, Lorraine, Oommen, Nikhil Babu, Carreira, Suzanne, Drake, Charles G, Jones, Robert, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Scher, Howard I and de Bono, Johann S (2012) Prognostic value of blood mRNA expression signatures in castration-resistant prostate cancer:a prospective, two-stage study. The Lancet Oncology, 13 (11). pp. 1114-24. ISSN 1470-2045

Ren, Guoping, Liu, Xiaoyan, Mao, Xueying, Zhang, Yanling, Stankiewicz, Elzbieta, Hylands, Lucy, Song, Rongrong, Berney, Daniel M, Clark, Jeremy, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Lu, Yong-Jie (2012) Identification of frequent BRAF copy number gain and alterations of RAF genes in Chinese prostate cancer. Genes, Chromosomes & Cancer, 51 (11). pp. 1014-23. ISSN 1045-2257

Jeetle, S. S., Fisher, G., Yang, Z. H., Stankiewicz, E., Møller, H., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Cuzick, J. and Berney, D. M. (2012) Neuroendocrine differentiation does not have independent prognostic value in conservatively treated prostate cancer. Virchows Archiv, 461 (2). pp. 103-107. ISSN 0945-6317

Pilar, Ana Victoria C., Reid-Yu, Sarah A., Cooper, Colin A. ORCID: https://orcid.org/0000-0003-2013-8042, Mulder, David T. and Coombes, Brian K. (2012) GogB is an anti-inflammatory effector that limits tissue damage during Salmonella infection through interaction with human FBXO22 and Skp1. PLoS Pathogens, 8 (6). ISSN 1553-7366

Mulder, David T, Cooper, Colin A ORCID: https://orcid.org/0000-0003-2013-8042 and Coombes, Brian K (2012) Type VI secretion system-associated gene clusters contribute to pathogenesis of Salmonella enterica serovar Typhimurium. Infection and Immunity, 80 (6). pp. 1996-2007. ISSN 0019-9567

Reid, Alison H. M., Attard, Gerhardt, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Miranda, Susana, Riisnaes, Ruth, Clark, Jeremy, Hylands, Lucy, Merson, Sue, Vergis, Roy, Jameson, Charles, Høyer, Søren, Sørensen, Karina Dalsgaard, Borre, Michael, Jones, Chris, de Bono, Johann S. and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (2012) Novel, gross chromosomal alterations involving PTEN cooperate with allelic loss in prostate cancer. Modern Pathology, 25 (6). pp. 902-10. ISSN 1530-0285

Yao, S., Ireland, S. J., Bee, A., Beesley, C., Forootan, S. S., Dodson, A., Dickinson, T., Gerard, P., Lian, L. Y., Risk, J. M., Smith, P., Malki, M. I., Ke, Y., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Gosden, C. and Foster, C. S. (2012) Splice variant PRKC-η-PrC is a novel biomarker of human prostate cancer. British Journal of Cancer, 107 (2). pp. 388-399. ISSN 0007-0920

Kote-Jarai, Zsofia, Olama, Ali Amin Al, Giles, Graham G, Severi, Gianluca, Schleutker, Johanna, Weischer, Maren, Campa, Daniele, Riboli, Elio, Key, Tim, Gronberg, Henrik, Hunter, David J, Kraft, Peter, Thun, Michael J, Ingles, Sue, Chanock, Stephen, Albanes, Demetrius, Hayes, Richard B, Neal, David E, Hamdy, Freddie C, Donovan, Jenny L, Pharoah, Paul, Schumacher, Fredrick, Henderson, Brian E, Stanford, Janet L, Ostrander, Elaine A, Sorensen, Karina Dalsgaard, Dörk, Thilo, Andriole, Gerald, Dickinson, Joanne L, Cybulski, Cezary, Lubinski, Jan, Spurdle, Amanda, Clements, Judith A, Chambers, Suzanne, Aitken, Joanne, Gardiner, R A Frank, Thibodeau, Stephen N, Schaid, Dan, John, Esther M, Maier, Christiane, Vogel, Walther, Cooney, Kathleen A, Park, Jong Y, Cannon-Albright, Lisa, Brenner, Hermann, Habuchi, Tomonori, Zhang, Hong-Wei, Lu, Yong-Jie, Kaneva, Radka and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 and UK Genetic Prostate Cancer Study Collaborators/British Association of Urological Surgeons' Section of Oncology (2011) Seven prostate cancer susceptibility loci identified by a multi-stage genome-wide association study. Nature Genetics, 43 (8). pp. 785-91. ISSN 1061-4036

Bee, Alix, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Beesley, Carol, Dodson, Andrew, Forootan, Shiva, Dickinson, Timothy, Gerard, Patricia, Lane, Brian, Yao, Sheng, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Djamgoz, Mustafa B. A., Gosden, Christine M., Ke, Youqiang and Foster, Christopher S. (2011) siRNA knockdown of ribosomal protein gene RPL19 abrogates the aggressive phenotype of human prostate cancer. PLoS One, 6 (7). ISSN 1932-6203

Eeles, R., Knee, G., Jhavar, S., Mangion, J., Ebbs, S., Gui, G., Thomas, S., Coppen, M., A'Hern, R., Gray, S., Cooper, C. ORCID: https://orcid.org/0000-0003-2013-8042, Bartek, J. and Yarnold, J. (2010) Multicentric breast cancer:Clonality and prognostic studies. Breast Cancer Research and Treatment, 129 (3). pp. 703-716. ISSN 0167-6806

Whitaker, Hayley C., Kote-Jarai, Zsofia, Ross-Adams, Helen, Warren, Anne Y., Burge, Johanna, George, Anne, Bancroft, Elizabeth, Jhavar, Sameer, Leongamornlert, Daniel, Tymrakiewicz, Malgorzata, Saunders, Edward, Page, Elizabeth, Mitra, Anita, Mitchell, Gillian, Lindeman, Geoffrey J., Evans, D. Gareth, Blanco, Ignacio, Mercer, Catherine, Rubinstein, Wendy S., Clowes, Virginia, Douglas, Fiona, Hodgson, Shirley, Walker, Lisa, Donaldson, Alan, Izatt, Louise, Dorkins, Huw, Male, Alison, Tucker, Kathy, Stapleton, Alan, Lam, Jimmy, Kirk, Judy, Lilja, Hans, Easton, Douglas, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Eeles, Rosalind and Neal, David E. and IMPACT Study Steering Committee, IMPACT Study Collaborators, UK GPCS Collaborators (2010) The rs10993994 risk allele for prostate cancer results in clinically relevant changes in microseminoprotein-beta expression in tissue and urine. PLoS One, 5 (10). ISSN 1932-6203

Pickard, Mark R, Edwards, Sandra E, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 and Williams, Gwyn T (2010) Apoptosis regulators Fau and Bcl-G are down-regulated in prostate cancer. The Prostate, 70 (14). pp. 1513-23. ISSN 1097-0045

Vergis, Roy, Corbishley, Catherine M, Thomas, Karen, Horwich, Alan, Huddart, Robert, Khoo, Vincent, Eeles, Ros, Sydes, Matthew R, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Dearnaley, David and Parker, Chris (2010) Expression of Bcl-2, p53, and MDM2 in localized prostate cancer with respect to the outcome of radical radiotherapy dose escalation. International Journal of Radiation Oncology, Biology, Physics, 78 (1). pp. 35-41. ISSN 1879-355X

Battaglia, Sebastiano, Maguire, Orla, Thorne, James L, Hornung, Laura B, Doig, Craig L, Liu, Song, Sucheston, Lara E, Bianchi, Anna, Khanim, Farhat L, Gommersall, Lyndon M, Coulter, Henry S O, Rakha, Serena, Giddings, Ian, O'Neill, Laura P, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, McCabe, Christopher J, Bunce, Christopher M and Campbell, Moray J (2010) Elevated NCOR1 disrupts PPARalpha/gamma signaling in prostate cancer and forms a targetable epigenetic lesion. Carcinogenesis, 31 (9). pp. 1650-60. ISSN 0143-3334

Yao, Sheng, Bee, Alix, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Dodson, Andrew, Beesley, Carol, Ke, Youqiang, Ambroisine, Laurence, Fisher, Gabrielle, Møller, Heinrich, Dickinson, Tim, Gerard, Patricia, Lian, Lu-Yu, Risk, Janet, Lane, Brian, Smith, Paul, Reuter, Victor, Berney, Daniel, Gosden, Christine, Scardino, Peter, Cuzick, Jack, Djamgoz, Mustafa B A, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Foster, Christopher S (2010) PRKC-ζ expression promotes the aggressive phenotype of human prostate cancer cells and is a novel target for therapeutic intervention. Genes & Cancer, 1 (5). pp. 444-464. ISSN 1947-6027

McCarthy, F., Dennis, N., Flohr, P., Jhavar, S., Parker, C. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2010) High-density tissue microarrays from prostate needle biopsies. Journal of Clinical Pathology, 64 (1). pp. 88-90. ISSN 0021-9746

Shan, L., Ambroisine, L., Clark, J., Yáñez-Muñoz, R. J., Fisher, G., Kudahetti, S. C., Yang, J., Kia, S., Mao, X., Fletcher, A., Flohr, P., Edwards, S., Attard, G., De-Bono, J., Young, B. D., Foster, C. S., Reuter, V., Moller, H., Oliver, T. D., Berney, D. M., Scardino, P., Cuzick, J., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Lu, Y. J. (2010) The identification of chromosomal translocation, t(4;6)(q22;q15), in prostate cancer. Prostate Cancer and Prostatic Diseases, 13 (2). pp. 117-125. ISSN 1365-7852

Reid, A H M, Attard, G, Ambroisine, L, Fisher, G, Kovacs, G, Brewer, D ORCID: https://orcid.org/0000-0003-4753-9794, Clark, J, Flohr, P, Edwards, S, Berney, D M, Foster, C S, Fletcher, A, Gerald, W L, Møller, H, Reuter, V E, Scardino, P T, Cuzick, J, de Bono, J S and Cooper, C S ORCID: https://orcid.org/0000-0003-2013-8042 and Transatlantic Prostate Group (2010) Molecular characterisation of ERG, ETV1 and PTEN gene loci identifies patients at low and high risk of death from prostate cancer. British Journal of Cancer, 102 (4). pp. 678-684. ISSN 0007-0920

Attard, Gerhardt, de Bono, Johann S, Clark, Jeremy and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2010) Studies of TMPRSS2-ERG gene fusions in diagnostic trans-rectal prostate biopsies. Clinical Cancer Research, 16 (4). 1340; author reply 1340. ISSN 1078-0432

Cooper, Colin A. ORCID: https://orcid.org/0000-0003-2013-8042, Zhang, Kun, Andres, Sara N., Fang, Yuan, Kaniuk, Natalia A., Hannemann, Mandy, Brumell, John H., Foster, Leonard J., Junop, Murray S. and Coombes, Brian K. (2010) Structural and biochemical characterization of SrcA, a multi-cargo type III secretion chaperone in Salmonella required for pathogenic association with a host. PLoS Pathogens, 6 (2). ISSN 1553-7366

Thomsen, Martin K, Ambroisine, Laurence, Wynn, Sarah, Cheah, Kathryn S E, Foster, Christopher S, Fisher, Gabrielle, Berney, Daniel M, Møller, Henrik, Reuter, Victor E, Scardino, Peter, Cuzick, Jack, Ragavan, Narasimhan, Singh, Paras B, Martin, Francis L, Butler, Christopher M, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 and Swain, Amanda and Transatlantic Prostate Group (2010) SOX9 elevation in the prostate promotes proliferation and cooperates with PTEN loss to drive tumor formation. Cancer Research, 70 (3). pp. 979-87. ISSN 0008-5472

Mitra, A. V., Jameson, C., Barbachano, Y., Sodha, N., Kote-Jarai, Z., Javed, A., Bancroft, E., Fletcher, A., Cooper, C. ORCID: https://orcid.org/0000-0003-2013-8042, Peock, S., Easton, D., Eeles, R. and Foster, C. S. (2010) Elevated expression of Ki-67 identifies aggressive prostate cancers but does not distinguish BRCA1 or BRCA2 mutation carriers. Oncology Reports, 23 (2). pp. 299-305. ISSN 1021-335X

Kudahetti, Sakunthala C, Fisher, Gabrielle, Ambroisine, Laurence, Prowse, David, Kattan, Michael W, Foster, Christopher S, Møller, Henrik, Oliver, Tim, Fletcher, Anne, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Reuter, Victor, Scardino, Peter, Cuzick, Jack and Berney, Daniel M and Transatlantic Prostate Group (2010) Immunohistochemistry for p16, but not Rb or p21, is an independent predictor of prognosis in conservatively treated, clinically localised prostate cancer. Plant Pathology, 42 (6). pp. 519-23. ISSN 0032-0862

Santarius, Thomas, Shipley, Janet, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Stratton, Michael R. and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (2010) A census of amplified and overexpressed human cancer genes. Nature Reviews, 10 (1). pp. 59-64.

Attard, Gerhardt, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 and de Bono, Johann S (2009) Steroid hormone receptors in prostate cancer:a hard habit to break? Cancer Cell, 16 (6). pp. 458-62. ISSN 1878-3686

Mitra, Anita, Jameson, Charles, Barbachano, Yolanda, Sanchez, Lydia, Kote-Jarai, Zsofia, Peock, Susan, Sodha, Nayanta, Bancroft, Elizabeth, Fletcher, Anne, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Easton, Douglas, Eeles, Rosalind and Foster, Christopher S and IMPACT Steering Committee and IMPACT and EMBRACE Collaborators (2009) Overexpression of RAD51 occurs in aggressive prostatic cancer. Histopathology, 55 (6). pp. 696-704. ISSN 1365-2559

Attard, Gerhardt, Rizzo, Sian, Ledaki, Ioanna, Clark, Jeremy, Reid, Alison H M, Thompson, Alan, Khoo, Vincent, de Bono, Johann S, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 and Hudson, David L (2009) A novel, spontaneously immortalized, human prostate cancer cell line, Bob, offers a unique model for pre-clinical prostate cancer studies. The Prostate, 69 (14). pp. 1507-20. ISSN 1097-0045

Al Olama, Ali Amin, Kote-Jarai, Zsofia, Giles, Graham G, Guy, Michelle, Morrison, Jonathan, Severi, Gianluca, Leongamornlert, Daniel A, Tymrakiewicz, Malgorzata, Jhavar, Sameer, Saunders, Ed, Hopper, John L, Southey, Melissa C, Muir, Kenneth R, English, Dallas R, Dearnaley, David P, Ardern-Jones, Audrey T, Hall, Amanda L, O'Brien, Lynne T, Wilkinson, Rosemary A, Sawyer, Emma, Lophatananon, Artitaya, Horwich, Alan, Huddart, Robert A, Khoo, Vincent S, Parker, Christopher C, Woodhouse, Christopher J, Thompson, Alan, Christmas, Tim, Ogden, Chris, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Donovan, Jenny L, Hamdy, Freddie C, Neal, David E, Eeles, Rosalind A and Easton, Douglas F and UK Genetic Prostate Cancer Study Collaborators/British Association of Urological Surgeons' Section of Oncology (2009) Multiple loci on 8q24 associated with prostate cancer susceptibility. Nature Genetics, 41 (10). pp. 1058-60. ISSN 1061-4036

Foster, C. S., Dodson, A. R., Ambroisine, L., Fisher, G., Møller, H., Clark, J., Attard, G., De-Bono, J., Scardino, P., Reuter, V. E., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Berney, D. M. and Cuzick, J. (2009) Hsp-27 expression at diagnosis predicts poor clinical outcome in prostate cancer independent of ETS-gene rearrangement. British Journal of Cancer, 101 (7). pp. 1137-1144. ISSN 0007-0920

Clark, Jeremy P and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2009) ETS gene fusions in prostate cancer. Nature Reviews Urology, 6 (8). pp. 429-39. ISSN 1759-4820

Foster, Christopher S and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2009) Urgent need to develop independent biomarkers for functional, diagnostic and prognostic application in oncology research. Biomarkers in Medicine, 3 (4). pp. 329-33. ISSN 1752-0371

Kudahetti, Sak, Fisher, Gabrielle, Ambroisine, Laurence, Foster, Christopher, Reuter, Victor, Eastham, James, Møller, Henrik, Kattan, Michael W, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Scardino, Peter, Cuzick, Jack and Berney, Daniel M (2009) p53 immunochemistry is an independent prognostic marker for outcome in conservatively treated prostate cancer. BJU International, 104 (1). pp. 20-4. ISSN 1464-4096

Jhavar, Sameer, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794, Edwards, Sandra, Kote-Jarai, Zsofia, Attard, Gerhardt, Clark, Jeremy, Flohr, Penny, Christmas, Timothy, Thompson, Alan, Parker, Matthew, Shepherd, Christopher, Stenman, Ulf-Hakan, Marchbank, Tania, Playford, Raymond J, Woodhouse, Christopher, Ogden, Christopher, Fisher, Cyril, Kovacs, Gyula, Corbishley, Cathy, Jameson, Charles, Norman, Andy, De-Bono, Johann, Bjartell, Anders, Eeles, Rosalind and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2009) Integration of ERG gene mapping and gene-expression profiling identifies distinct categories of human prostate cancer. BJU International, 103 (9). pp. 1256-69. ISSN 1464-4096

Attard, Gerhardt, Swennenhuis, Joost F, Olmos, David, Reid, Alison H M, Vickers, Elaine, A'Hern, Roger, Levink, Rianne, Coumans, Frank, Moreira, Joana, Riisnaes, Ruth, Oommen, Nikhil Babu, Hawche, George, Jameson, Charles, Thompson, Emilda, Sipkema, Ronald, Carden, Craig P, Parker, Christopher, Dearnaley, David, Kaye, Stan B, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Molina, Arturo, Cox, Michael E, Terstappen, Leon W M M and de Bono, Johann S (2009) Characterization of ERG, AR and PTEN gene status in circulating tumor cells from patients with castration-resistant prostate cancer. Cancer Research, 69 (7). pp. 2912-8. ISSN 0008-5472

McCarthy, F., Fletcher, A., Dennis, N., Cummings, C., O'Donnell, H., Clark, J., Flohr, P., Vergis, R., Jhavar, S., Parker, C. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2009) An improved method for constructing tissue microarrays from prostate needle biopsy specimens. Journal of Clinical Pathology, 62 (8). pp. 694-698. ISSN 0021-9746

Berney, D. M., Gopalan, A., Kudahetti, S., Fisher, G., Ambroisine, L., Foster, C. S., Reuter, V., Eastham, J., Møller, H., Kattan, M. W., Gerald, W., Cooper, C. ORCID: https://orcid.org/0000-0003-2013-8042, Scardino, P. and Cuzick, J. (2009) Ki-67 and outcome in clinically localised prostate cancer:Analysis of conservatively treated prostate cancer patients from the trans-atlantic prostate group study. British Journal of Cancer, 100 (6). pp. 888-893. ISSN 0007-0920

Jhavar, S, Bartlett, J, Kovacs, G, Corbishley, C, Dearnaley, D, Eeles, R, Khoo, V, Huddart, R, Horwich, A, Thompson, A, Norman, A, Brewer, D ORCID: https://orcid.org/0000-0003-4753-9794, Cooper, C S ORCID: https://orcid.org/0000-0003-2013-8042 and Parker, C (2009) Biopsy tissue microarray study of Ki-67 expression in untreated, localized prostate cancer managed by active surveillance. Prostate Cancer and Prostatic Diseases, 12 (2). pp. 143-147. ISSN 1476-5608

Knight, J F, Shepherd, C J, Rizzo, S, Brewer, D ORCID: https://orcid.org/0000-0003-4753-9794, Jhavar, S, Dodson, A R, Cooper, C S ORCID: https://orcid.org/0000-0003-2013-8042, Eeles, R, Falconer, A, Kovacs, G, Garrett, M D, Norman, A R, Shipley, J and Hudson, D L (2008) TEAD1 and c-Cbl are novel prostate basal cell markers that correlate with poor clinical outcome in prostate cancer. British Journal of Cancer, 99 (11). pp. 1849-1858. ISSN 0007-0920

Attard, G., Jameson, C., Moreira, J., Flohr, P., Parker, C., Dearnaley, D., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and De Bono, J. S. (2008) Hormone-sensitive prostate cancer:A case of ETS gene fusion heterogeneity. Journal of Clinical Pathology, 62 (4). pp. 373-376. ISSN 0021-9746

Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Foster, C. S. (2008) Concepts of epigenetics in prostate cancer development. British Journal of Cancer, 100 (2). pp. 240-245. ISSN 0007-0920

Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 (2008) Editorial comment on:ADAM9 expression is a significant and independent prognostic marker of PSA relapse in prostate cancer. European Urology, 54 (5). pp. 1107-8. ISSN 0302-2838

Attard, Gerhardt, Reid, Alison H M, Yap, Timothy A, Raynaud, Florence, Dowsett, Mitch, Settatree, Sarah, Barrett, Mary, Parker, Christopher, Martins, Vanessa, Folkerd, Elizabeth, Clark, Jeremy, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Kaye, Stan B, Dearnaley, David, Lee, Gloria and de Bono, Johann S (2008) Phase I clinical trial of a selective inhibitor of CYP17, abiraterone acetate, confirms that castration-resistant prostate cancer commonly remains hormone driven. Journal of Clinical Oncology, 26 (28). pp. 4563-71. ISSN 1527-7755

Attard, G., Clark, J., Ambroisine, L., Mills, I. G., Fisher, G., Flohr, P., Reid, A., Edwards, S., Kovacs, G., Berney, D., Foster, C., Massie, C. E., Fletcher, A., De Bono, J. S., Scardino, P., Cuzick, J. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2008) Heterogeneity and clinical significance of ETV1 translocations in human prostate cancer. British Journal of Cancer, 99 (2). pp. 314-320. ISSN 0007-0920

Vergis, Roy, Corbishley, Catherine M, Norman, Andrew R, Bartlett, Jaclyn, Jhavar, Sameer, Borre, Michael, Heeboll, Sara, Horwich, Alan, Huddart, Robert, Khoo, Vincent, Eeles, Ros, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Sydes, Matthew, Dearnaley, David and Parker, Chris (2008) Intrinsic markers of tumour hypoxia and angiogenesis in localised prostate cancer and outcome of radical treatment:a retrospective analysis of two randomised radiotherapy trials and one surgical cohort study. The Lancet Oncology, 9 (4). pp. 342-351. ISSN 1470-2045

Eeles, Rosalind A., Kote-Jarai, Zsofia, Giles, Graham G., Olama, Ali Amin Al, Guy, Michelle, Jugurnauth, Sarah K., Mulholland, Shani, Leongamornlert, Daniel A., Edwards, Stephen M., Morrison, Jonathan, Field, Helen I., Southey, Melissa C., Severi, Gianluca, Donovan, Jenny L., Hamdy, Freddie C., Dearnaley, David P., Muir, Kenneth R., Smith, Charmaine, Bagnato, Melisa, Ardern-Jones, Audrey T., Hall, Amanda L., O'Brien, Lynne T., Gehr-Swain, Beatrice N., Wilkinson, Rosemary A., Cox, Angie, Lewis, Sarah, Brown, Paul M., Jhavar, Sameer G., Tymrakiewicz, Malgorzata, Lophatananon, Artitaya, Bryant, Sarah L., Horwich, Alan, Huddart, Robert A., Khoo, Vincent S., Parker, Christopher C., Woodhouse, Christopher J., Thompson, Alan, Christmas, Tim, Ogden, Chris, Fisher, Cyril, Jamieson, Charles, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, English, Dallas R., Hopper, John L., Neal, David E. and Easton, Douglas F. (2008) Multiple newly identified loci associated with prostate cancer susceptibility. Nature Genetics, 40 (3). pp. 316-321. ISSN 1546-1718

Attard, G., Clark, J., Ambroisine, L., Fisher, G., Kovacs, G., Flohr, P., Berney, D., Foster, C. S., Fletcher, A., Gerald, W. L., Moller, H., Reuter, V., de Bono, J. S., Scardino, P., Cuzick, J. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Transatlantic Prostate Group (2008) Duplication of the fusion of TMPRSS2 to ERG sequences identifies fatal human prostate cancer. Oncogene, 27 (3). pp. 253-263. ISSN 1476-5594

Jhavar, Sameer, Reid, Alison, Clark, Jeremy, Kote-Jarai, Zsofia, Christmas, Timothy, Thompson, Alan, Woodhouse, Christopher, Ogden, Christopher, Fisher, Cyril, Corbishley, Cathy, De-Bono, Johann, Eeles, Rosalind, Brewer, Daniel ORCID: https://orcid.org/0000-0003-4753-9794 and Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 (2008) Detection of TMPRSS2-ERG translocations in human prostate cancer by expression profiling using GeneChip Human Exon 1.0 ST arrays. Journal of Molecular Diagnostics, 10 (1). pp. 50-7. ISSN 1525-1578

Clark, J., Attard, G., Jhavar, S., Flohr, P., Reid, A., De-Bono, J., Eeles, R., Scardino, P., Cuzick, J., Fisher, G., Parker, M. D., Foster, C. S., Berney, D., Kovacs, G. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2008) Complex patterns of ETS gene alteration arise during cancer development in the human prostate. Oncogene, 27 (14). pp. 1993-2003. ISSN 1476-5594

Cooper, Colin A ORCID: https://orcid.org/0000-0003-2013-8042, Walsh, Logan A and Damjanovski, Sashko (2007) Peroxisome biogenesis occurs in late dorsal-anterior structures in the development of Xenopus laevis. Developmental Dynamics, 236 (12). pp. 3554-61. ISSN 1058-8388

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Campbell, Colin and Jhavar, Sameer (2007) Mechanisms of Disease:Biomarkers and molecular targets from microarray gene expression studies in prostate cancer. Nature Clinical Practice Urology, 4 (12). pp. 677-687. ISSN 1743-4270

Walsh, Logan A., Carere, Deanna A., Cooper, Colin A. ORCID: https://orcid.org/0000-0003-2013-8042 and Damjanovski, Sashko (2007) Membrane type-1 matrix metalloproteinases and tissue inhibitor of metalloproteinases-2 RNA levels mimic each other during Xenopus laevis metamorphosis. PLoS One, 2 (10). ISSN 1932-6203

Walsh, Logan A, Cooper, Colin A ORCID: https://orcid.org/0000-0003-2013-8042 and Damjanovski, Sashko (2007) Soluble membrane-type 3 matrix metalloprioteinase causes changes in gene expression and increased gelatinase activity during Xenopus laevis development. International Journal of Developmental Biology, 51 (5). pp. 389-95. ISSN 0214-6282

Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Nicholson, Andrew G, Foster, Christopher, Dodson, Andrew, Edwards, Sandra, Fletcher, Anne, Roe, Toby, Clark, Jeremy, Joshi, Anupam, Norman, Andrew, Feber, Andrew, Lin, Dongmei, Gao, Yanning, Shipley, Janet and Cheng, Shu-Jun (2006) Nuclear overexpression of the E2F3 transcription factor in human lung cancer. Lung Cancer, 54 (2). pp. 155-62. ISSN 0169-5002

Clark, J., Merson, S., Jhavar, S., Flohr, P., Edwards, S., Foster, C. S., Eeles, R., Martin, F. L., Phillips, D. H., Crundwell, M., Christmas, T., Thompson, A., Fisher, C., Kovacs, G. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2006) Diversity of TMPRSS2-ERG fusion transcripts in the human prostate. Oncogene, 26 (18). pp. 2667-2673. ISSN 0950-9232

Olsson, A. Y., Feber, A., Edwards, S., Te Poele, R., Giddings, I., Merson, S. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2006) Role of E2F3 expression in modulating cellular proliferation rate in human bladder and prostate cancer cells. Oncogene, 26 (7). pp. 1028-1037. ISSN 0950-9232

Mourtada-Maarabouni, Mirna, Keen, Jennifer, Clark, Jeremy, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 and Williams, Gwyn T (2006) Candidate tumor suppressor LUCA-15/RBM5/H37 modulates expression of apoptosis and cell cycle genes. Experimental Cell Research, 312 (10). pp. 1745-52. ISSN 0014-4827

Perani, Michela, Antonson, Per, Hamoudi, Rifat, Ingram, Catherine J E, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Garrett, Michelle D and Goodwin, Graham H (2005) The proto-oncoprotein SYT interacts with SYT-interacting protein/co-activator activator (SIP/CoAA), a human nuclear receptor co-activator with similarity to EWS and TLS/FUS family of proteins. Journal of Biological Chemistry, 280 (52). pp. 42863-76. ISSN 0021-9258

Olsson, A. Yvonne and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2005) The molecular basis of prostate cancer. British Journal of Hospital Medicine, 66 (11). pp. 612-6. ISSN 1750-8460

Carrivick, L., Rogers, S., Clark, J., Campbell, C., Girolami, M. and Cooper, C. ORCID: https://orcid.org/0000-0003-2013-8042 (2005) Identification of prognostic signatures in breast cancer microarray data using Bayesian techniques. Journal of The Royal Society Interface, 3 (8). pp. 367-381. ISSN 1742-5689

McIntyre, Alan, Summersgill, Brenda, Grygalewicz, Beata, Gillis, Ad J. M., Stoop, J., van Gurp, Ruud J. H. L. M., Dennis, Nening, Fisher, Cyril, Huddart, Robert, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Clark, Jeremy, Oosterhuis, J. Wolter, Looijenga, Leendert H. J. and Shipley, Janet (2005) Amplification and overexpression of the KIT gene is associated with progression in the seminoma subtype of testicular germ cell tumors of adolescents and adults. Cancer Research, 65 (18). pp. 8085-8089. ISSN 0008-5472

Davies, Helen, Hunter, Chris, Smith, Raffaella, Stephens, Philip, Greenman, Christopher, Bignell, Graham, Teague, Jon, Butler, Adam, Edkins, Sarah, Stevens, Claire, Parker, Adrian, O'Meara, Sarah, Avis, Tim, Barthorpe, Syd, Brackenbury, Lisa, Buck, Gemma, Clements, Jody, Cole, Jennifer, Dicks, Ed, Edwards, Ken, Forbes, Simon, Gorton, Matthew, Gray, Kristian, Halliday, Kelly, Harrison, Rachel, Hills, Katy, Hinton, Jonathon, Jones, David, Kosmidou, Vivienne, Laman, Ross, Lugg, Richard, Menzies, Andrew, Perry, Janet, Petty, Robert, Raine, Keiran, Shepherd, Rebecca, Small, Alexandra, Solomon, Helen, Stephens, Yvonne, Tofts, Calli, Varian, Jennifer, Webb, Anthony, West, Sofie, Widaa, Sara, Yates, Andrew, Brasseur, Francis, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Flanagan, Adrienne M, Green, Anthony, Knowles, Maggie, Leung, Suet Y, Looijenga, Leendert H J, Malkowicz, Bruce, Pierotti, Marco A, Teh, Bin T, Yuen, Siu T, Lakhani, Sunil R, Easton, Douglas F, Weber, Barbara L, Goldstraw, Peter, Nicholson, Andrew G, Wooster, Richard, Stratton, Michael R and Futreal, P Andrew (2005) Somatic mutations of the protein kinase gene family in human lung cancer. Cancer Research, 65 (17). pp. 7591-5. ISSN 0008-5472

Jhavar, S., Corbishley, C. M., Dearnaley, D., Fisher, C., Falconer, A., Parker, C., Eeles, R. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2005) Construction of tissue microarrays from prostate needle biopsy specimens. British Journal of Cancer, 93 (4). pp. 478-482. ISSN 0007-0920

Stephens, Philip, Edkins, Sarah, Davies, Helen, Greenman, Christopher, Cox, Charles, Hunter, Chris, Bignell, Graham, Teague, Jon, Smith, Raffaella, Stevens, Claire, O'Meara, Sarah, Parker, Adrian, Tarpey, Patrick, Avis, Tim, Barthorpe, Andy, Brackenbury, Lisa, Buck, Gemma, Butler, Adam, Clements, Jody, Cole, Jennifer, Dicks, Ed, Edwards, Ken, Forbes, Simon, Gorton, Matthew, Gray, Kristian, Halliday, Kelly, Harrison, Rachel, Hills, Katy, Hinton, Jonathon, Jones, David, Kosmidou, Vivienne, Laman, Ross, Lugg, Richard, Menzies, Andrew, Perry, Janet, Petty, Robert, Raine, Keiran, Shepherd, Rebecca, Small, Alexandra, Solomon, Helen, Stephens, Yvonne, Tofts, Calli, Varian, Jennifer, Webb, Anthony, West, Sofie, Widaa, Sara, Yates, Andrew, Brasseur, Francis, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Flanagan, Adrienne M, Green, Anthony, Knowles, Maggie, Leung, Suet Y, Looijenga, Leendert H J, Malkowicz, Bruce, Pierotti, Marco A, Teh, Bin, Yuen, Siu T, Nicholson, Andrew G, Lakhani, Sunil, Easton, Douglas F, Weber, Barbara L, Stratton, Michael R, Futreal, P Andrew and Wooster, Richard (2005) A screen of the complete protein kinase gene family identifies diverse patterns of somatic mutations in human breast cancer. Nature Genetics, 37 (6). pp. 590-592. ISSN 1061-4036

Edwards, S., Campbell, C., Flohr, P., Shipley, J., Giddings, I., Te-Poele, R., Dodson, A., Foster, C., Clark, J., Jhavar, S., Kovacs, G. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2004) Expression analysis onto microarrays of randomly selected cDNA clones highlights HOXB13 as a marker of human prostate cancer. British Journal of Cancer, 92 (2). pp. 376-381. ISSN 0007-0920

McIntyre, Alan, Summersgill, Brenda, Jafer, Osman, Rodriguez, Sandrine, Zafarana, Gaetano, Oosterhuis, J Wolter, Gillis, Ad Jm, Looijenga, Leendert, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Huddart, Robert, Clark, Jeremy and Shipley, Janet (2004) Defining minimum genomic regions of imbalance involved in testicular germ cell tumors of adolescents and adults through genome wide microarray analysis of cDNA clones. Oncogene, 23 (56). pp. 9142-7. ISSN 0950-9232

Jhavar, S. G., Fisher, C., Jackson, A., Reinsberg, S. A., Dennis, N., Falconer, A., Dearnaley, D., Edwards, S. M., Edwards, S. M., Leach, M. O., Cummings, C., Christmas, T., Thompson, A., Woodhouse, C., Sandhu, S., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Eeles, R. A. (2004) Processing of radical prostatectomy specimens for correlation of data from histopathological, molecular biological, and radiological studies:A new whole organ technique. Journal of Clinical Pathology, 58 (5). pp. 504-508. ISSN 0021-9746

Lee, Yin-Fai, John, Megan, Falconer, Alison, Edwards, Sandra, Clark, Jeremy, Flohr, Penny, Roe, Toby, Wang, Rubin, Shipley, Janet, Grimer, Robert J, Mangham, D Chas, Thomas, J Meirion, Fisher, Cyril, Judson, Ian and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2004) A gene expression signature associated with metastatic outcome in human leiomyosarcomas. Cancer Research, 64 (20). pp. 7201-4. ISSN 0008-5472

Stephens, Philip, Hunter, Chris, Bignell, Graham, Edkins, Sarah, Davies, Helen, Teague, Jon, Stevens, Claire, O'meara, Sarah, Smith, Raffaella, Parker, Adrian, Barthorpe, Andy, Blow, Matthew, Brackenbury, Lisa, Butler, Adam, Clarke, Oliver, Cole, Jennifer, Dicks, Ed, Dike, Angus, Drozd, Anja, Edwards, Ken, Forbes, Simon, Foster, Rebecca, Gray, Kristian, Greenman, Christopher, Halliday, Kelly, Hills, Katy, Kosmidou, Vivienne, Lugg, Richard, Menzies, Andy, Perry, Janet, Petty, Robert, Raine, Keiran, Ratford, Lewis, Shepherd, Rebecca, Small, Alexandra, Stephens, Yvonne, Tofts, Calli, Varian, Jennifer, West, Sofie, Widaa, Sara, Yates, Andrew, Brasseur, Francis, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Flanagan, Adrienne M., Knowles, Margaret, Leung, Suet Y., Louis, David N., Looijenga, Leendert H. J., Malkowicz, Bruce, Pierotti, Marco A., Teh, Bin, Chenevix-trench, Georgia, Weber, Barbara L., Yuen, Siu T., Harris, Grace, Goldstraw, Peter, Nicholson, Andrew G., Futreal, P. Andrew, Wooster, Richard and Stratton, Michael R. (2004) Lung cancer:intragenic ERBB2 kinase mutations in tumours. Nature, 431 (7008). pp. 525-526. ISSN 0028-0836

Foster, Christopher S, Falconer, Alison, Dodson, Andrew R, Norman, Andrew R, Dennis, Nening, Fletcher, Anne, Southgate, Christine, Dowe, Anna, Dearnaley, David, Jhavar, Sameer, Eeles, Rosalind, Feber, Andrew and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2004) Transcription factor E2F3 overexpressed in prostate cancer independently predicts clinical outcome. Oncogene, 23 (35). pp. 5871-9. ISSN 0950-9232

Feber, Andrew, Clark, Jeremy, Goodwin, Graham, Dodson, Andrew R, Smith, Paul H, Fletcher, Anne, Edwards, Sandra, Flohr, Penny, Falconer, Alison, Roe, Toby, Kovacs, Gyula, Dennis, Nening, Fisher, Cyril, Wooster, Richard, Huddart, Robert, Foster, Christopher S and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2004) Amplification and overexpression of E2F3 in human bladder cancer. Oncogene, 23 (8). pp. 1627-30. ISSN 0950-9232

Perani, Michela, Ingram, Catherine J E, Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042, Garrett, Michelle D and Goodwin, Graham H (2003) Conserved SNH domain of the proto-oncoprotein SYT interacts with components of the human chromatin remodelling complexes, while the QPGY repeat domain forms homo-oligomers. Oncogene, 22 (50). pp. 8156-67. ISSN 0950-9232

Rodriguez, S., Jafer, O., Goker, H., Summersgill, B. M., Zafarana, G., Gillis, A. J.M., Van Gurp, R. J.H.L.M., Oosterhuis, J. W., Lu, Y. J., Huddart, R., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Clark, J., Looijenga, L. H.J. and Shipley, J. M. (2003) Expression profile of genes from 12p in testicular germ cell tumors of adolescents and adults associated with i(12p) and amplification at 12p11.2-p12.1. Oncogene, 22 (12). pp. 1880-1891. ISSN 0950-9232

Clark, Jeremy, Edwards, Sandra, Feber, Andrew, Flohr, Penny, John, Megan, Giddings, Ian, Crossland, Sue, Stratton, Michael R, Wooster, Richard, Campbell, Colin and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2003) Genome-wide screening for complete genetic loss in prostate cancer by comparative hybridization onto cDNA microarrays. Oncogene, 22 (8). pp. 1247-52. ISSN 0950-9232

Lee, Y. F., John, M., Edwards, S., Clark, J., Flohr, P., Maillard, K., Edema, M., Baker, L., Mangham, D. C., Grimer, R., Wooster, R., Thomas, J. M., Fisher, C., Judson, I. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2003) Molecular classification of synovial sarcomas, leiomyosarcomas and malignant fibrous histiocytomas by gene expression profiling. British Journal of Cancer, 88 (4). pp. 510-515. ISSN 0007-0920

Blain, Peter G., Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Farmer, Peter B., Forman, David, Harrison, David J., Howel, Denise M., Kennedy, Sandra J., Langley, Margaret, Phillips, David H., Renwick, Andrew G., Roberts, Ruth A., Shuker, David E.G. and Williams, Geraint T. (2003) Committee on carcinogenicity of chemicals in food, consumer products and the environment statement on ILSI/HESI research programme on alternative cancer models. Toxicologic Pathology, 31 (2). pp. 254-257. ISSN 0192-6233

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (2002) Smoking, lung cancers and their TP53 mutations. Mutagenesis, 17 (4). pp. 279-280. ISSN 0267-8357

Davies, Helen, Bignell, Graham R, Cox, Charles, Stephens, Philip, Edkins, Sarah, Clegg, Sheila, Teague, Jon, Woffendin, Hayley, Garnett, Mathew J, Bottomley, William, Davis, Neil, Dicks, Ed, Ewing, Rebecca, Floyd, Yvonne, Gray, Kristian, Hawes, Rachel, Hughes, Jaime, Kosmidou, Vivian, Menzies, Andrew, Mould, Catherine, Parker, Adrian, Stevens, Claire, Watt, Stephen, Wilson, Rebecca, Jayatilake, Hiran, Gusterson, Barry A, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Shipley, Janet, Hargrave, Darren, Pritchard-Jones, Katherine, Maitland, Norman, Chenevix-Trench, Georgia, Riggins, Gregory J, Bigner, Darell D, Palmieri, Giuseppe, Cossu, Antonio, Flanagan, Adrienne, Nicholson, Andrew, Ho, Judy W C, Leung, Suet Y, Yuen, Siu T, Weber, Barbara L, Seigler, Hilliard F, Darrow, Timothy L, Paterson, Hugh, Marais, Richard, Marshall, Christopher J, Wooster, Richard, Stratton, Michael R and Futreal, P Andrew (2002) Mutations of the BRAF gene in human cancer. Nature, 417 (6892). pp. 949-54. ISSN 0028-0836

Clark, Jeremy, Edwards, Sandra, John, Megan, Flohr, Penny, Gordon, Tony, Maillard, Karine, Giddings, Ian, Brown, Carolanne, Bagherzadeh, Azadeh, Campbell, Colin, Shipley, Janet, Wooster, Richard and Cooper, Colin S ORCID: https://orcid.org/0000-0003-2013-8042 (2002) Identification of amplified and expressed genes in breast cancer by comparative hybridization onto microarrays of randomly selected cDNA clones. Genes, Chromosomes & Cancer, 34 (1). pp. 104-14. ISSN 1045-2257

Jiang, Jia-Qian, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Ouki, Sabeha (2002) Comparison of modified montmorillonite adsorbents. Part I: Preparation, characterization and phenol adsorption. Chemosphere, 47 (7). pp. 711-716. ISSN 0045-6535

Ladanyi, Marc, Antonescu, Cristina R., Leung, Denis H., Woodruff, James M., Kawai, Akira, Healey, John H., Brennan, Murray F., Bridge, Julia A., Neff, James R., Barr, Frederic G., Goldsmith, Jeffrey D., Brooks, John S. J., Goldblum, John R., Ali, Syed Z., Shipley, Janet, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Fisher, Cyril, Skytting, Björn and Larsson, Olle (2002) Impact of SYT-SSX fusion type on the clinical behavior of synovial sarcoma: a multi-institutional retrospective study of 243 patients. Cancer Research, 62 (1). pp. 135-140. ISSN 0008-5472

Lu, Yong Jie, Williamson, Daniel, Clark, Jeremy, Wang, Rubin, Tiffin, Nicki, Skelton, Lorraine, Gordon, Tony, Williams, Richard, Allan, Barry, Jackman, Ann, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Pritchard-Jones, Kathy and Shipley, Janet (2001) Comparative expressed sequence hybridization to chromosomes for tumor classification and identification of genomic regions of differential gene expression. Proceedings of the National Academy of Sciences of the United States of America, 98 (16). pp. 9197-9202. ISSN 0027-8424

Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2001) Applications of microarray technology in breast cancer research. Breast Cancer Research, 3 (3). pp. 158-175. ISSN 1465-5411

Skalsky, Y. M., Ajuh, P. M., Parker, C., Lamond, A. I., Goodwin, G. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (2001) PRCC, the commonest TFE3 fusion partner in papillary renal carcinoma is associated with pre-mRNA splicing factors. Oncogene, 20 (2). pp. 178-187. ISSN 0950-9232

Sutherland, Leslie C., Edwards, Sandra E., Cable, Hazel C., Poirier, Guy G., Miller, Barbara A., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Williams, Gwyn T. (2000) LUCA-I5-encoded sequence variants regulate CD95-mediated apoptosis. Oncogene, 19 (33). pp. 3774-3781. ISSN 0950-9232

Smedley, Damian, Sidhar, Sanjiv, Birdsall, Sandra, Bennett, Dorothy, Herlyn, Meenhard, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Shipley, Janet (2000) Characterization of chromosome 1 abnormalities in malignant melanomas. Genes Chromosomes and Cancer, 28 (1). pp. 121-125. ISSN 1045-2257

Rapley, Elizabeth A., Crockford, Gillian P., Teare, Dawn, Biggs, Patrick, Seal, Sheila, Barfoot, Rita, Edwards, Sandra, Hamoudi, Rifat, Heimdal, Ketil, Fosså, Sophie D., Tucker, Kathy, Donald, Jenny, Collins, Felicity, Friedlander, Michael, Hogg, David, Goss, Paul, Heidenreich, Axel, Ormiston, Wilma, Daly, Peter A., Forman, David, Oliver, R. Timothy D., Leahy, Michael, Huddart, Robert, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Bodmer, Julia G., Easton, Douglas F., Stratton, Michael R. and Bishop, D. Timothy (2000) Localization to Xq27 of a susceptibility gene for testicular germ-cell tumours. Nature Genetics, 24 (2). pp. 197-200. ISSN 1061-4036

Smedley, Damian, Demiroglu, Asuman, Abdul-Rauf, Munah, Heath, Carol, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042, Shipley, Janet and Cross, Nicholas C. P. (1999) ZNF198-FGFR1 transforms Ba/F3 cells to growth factor independence and results in high level tyrosine phosphorylation of STATS 1 and 5. Neoplasia, 1 (4). pp. 349-355. ISSN 1522-8002

Smedley, Damian, Hamoudi, Rifat, Lu, Yong Jie, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Shipley, Janet (1999) Cloning and mapping of members of the MYM family. Genomics, 60 (2). pp. 244-247. ISSN 0888-7543

Gill, S., Broni, J., Jefferies, S., Osin, P., Kovacs, G., Maitland, N. J., Eeles, R., Edwards, S. M., Dyer, M. J. S., Willis, T. G. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and the M. P. T. Collaborators, the St George’s Hospital Collaborators (1999) BCL10 is rarely mutated in human prostate carcinoma, small cell lung cancer, head and neck tumours, renal carcinoma and sarcomas. British Journal of Cancer, 80 (10). pp. 1565-1568. ISSN 0007-0920

Thaete, C., Brett, D., Monaghan, P., Whitehouse, S., Rennie, G., Rayner, E., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Goodwin, G. (1999) Functional domains of the SYT and SYT-SSX synovial sarcoma translocation proteins and co-localization with the SNF protein BRM in the nucleus. Human Molecular Genetics, 8 (4). pp. 585-591. ISSN 0964-6906

Cuthbert, Andrew P., Bond, Jacquelyn, Trott, Deborah A., Gill, Sandra, Broni, Jessica, Marriott, Alison, Khoudoli, Guennadi, Parkinson, E. Kenneth, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Newbold, Robert F. (1999) Telomerase repressor sequences on chromosome 3 and induction of permanent growth arrest in human breast cancer cells. Journal of the National Cancer Institute, 91 (1). pp. 37-45. ISSN 0027-8874

Smedley, Damian, Somers, Gino, Venter, Deon, Chow, Chung Wo, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Shipley, Janet (1998) Characterization of a t(8;13)(p11;q11-12) in an atypical myeloproliferative disorder. Genes Chromosomes and Cancer, 21 (1). pp. 70-73. ISSN 1045-2257

Blain, Peter G., Battershill, Jon M., Venitt, Stanley, Cooper, Colin C. ORCID: https://orcid.org/0000-0003-2013-8042 and Fielder, Robin J. (1998) Consideration of short-term carcinogenicity tests using transgenic mouse models. Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis, 403 (1-2). pp. 259-263. ISSN 0027-5107

Hamoudi, Rifat, Clark, Jeremy, Warren, William, Abdul-Rauf, Munah, Somers, Gino, Venter, Deon, Fagan, Kerry, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Shipley, Janet (1998) The t(8;13)(p11;q11-12) rearrangement associated with an atypical myeloproliferative disorder fuses the fibroblast growth factor receptor 1 gene to a novel gene RAMP. Human Molecular Genetics, 7 (4). pp. 637-642. ISSN 0964-6906

Patterson, Helen, Gill, Sandra, Benjamin, Harry, Mitchell, Philip J. and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1998) lip, a human gene detected by transfection of DNA from a human liposarcoma encodes a protein with homology to regulators of small G proteins. Sarcoma, 2 (1). pp. 35-44. ISSN 1357-714X

Clark, Jeremy, Lu, Yong Jie, Sidhar, Sanjiv K., Parker, Chris, Gill, Sandra, Smedley, Damian, Hamoudi, Rifat, Linehan, W. Marston, Shipley, Janet and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1997) Fusion of splicing factor genes PSF and NonO (p54(nrb)) to the TFE3 gene in papillary renal cell carcinoma. Oncogene, 15 (18). pp. 2233-2239. ISSN 0950-9232

Kovacs, Gyula, Akhtar, Mohammed, Beckwith, Bruce J., Bugert, Peter, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Delahunt, Brett, Eble, John N., Fleming, Stewart, Ljungberg, Börje, Medeiros, L. Jeffrey, Moch, Holger, Reuter, Victor E., Ritz, Eberhard, Roos, Göran, Schmidt, Dietmar, Srigley, John R., Störkel, Stephan, van den Berg, Eva and Zbar, Bert (1997) The Heidelberg classification of renal cell tumours. The Journal of Pathology, 183 (2). pp. 131-133. ISSN 0022-3417

Brett, David, Whitehouse, Suzanna, Antonson, Per, Shipley, Janet, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Goodwin, Graham (1997) The SYT protein involved in the t(X;18) synovial sarcoma translocation is a transcriptional activator localised in nuclear bodies. Human Molecular Genetics, 6 (9). pp. 1559-1564. ISSN 0964-6906

Patterson, Helen, Barnes, Diana, Gill, Sandra, Spicer, James, Fisher, Cyril, Thomas, Merion, Grimer, Robert, Fletcher, Chris, Gusterson, Barry and Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 (1997) Amplification and over-expression of the MDM2 gene in human soft tissue tumours. Sarcoma, 1 (1). pp. 17-22. ISSN 1357-714X

Sidhar, Sanjiv K., Clark, Jeremy, Gill, Sandra, Hamoudi, Rifat, Crew, A. Jayne, Gwilliam, Rhian, Ross, Mark, Linehan, W. Marston, Birdsall, Sandra, Shipley, Janet and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1996) The t(X;1)(p11.2;q21.2) translocation in papillary renal sell carcinoma fuses a novel gene PRCC to the TFE3 transcription factor gene. Human Molecular Genetics, 5 (9). pp. 1333-1338. ISSN 0964-6906

Birdsall, Sandra H., Stamps, Alasdair C., Gusterson, Barry A., Shipley, Janet M., Gill, Sandra E. and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1996) No rearrangement of the CHOP and TLS/FUS genes in two cases of phyllodes tumor of the breast. Cancer Genetics and Cytogenetics, 87 (1). pp. 90-91. ISSN 0165-4608

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1996) Translocations in solid tumours. Current Opinion in Genetics and Development, 6 (1). pp. 71-75. ISSN 0959-437X

Shipley, Janet, Crew, Jayne, Birdsall, Sandra, Gill, Sandra, Clark, Jeremy, Fisher, Cyril, Kelsey, Anna, Nojima, Takayuki, Sonobe, Hiroshi, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Gusterson, Barry (1996) Interphase fluorescence in situ hybridization and reverse transcription polymerase chain reaction as a diagnostic aid for synovial sarcoma. American Journal of Pathology, 148 (2). pp. 559-567. ISSN 0002-9440

Clark, Jeremy, Benjamin, Harry, Gill, Sandra, Sidhar, Sanjiu, Goodwin, Graham, Crew, Jayne, Gusterson, Barry A., Shipley, Janet and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1996) Fusion of the EWS gene to CHN, a member of the steroid/thyroid receptor gene superfamily, in a human myxoid chondrosarcoma. Oncogene, 12 (2). pp. 229-235. ISSN 0950-9232

Chand, Aarti, Clark, Jeremy, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Craig, Ian W. (1995) Long-range organization of reiterated sequences, including the SSX1 cDNA, at the OATL1 cluster in Xp11.23. Genomics, 30 (3). pp. 545-552. ISSN 0888-7543

Huddart, R. A., Wooster, R., Horwich, A. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1995) Microsatellite instability in human testicular germ cell tumours. British Journal of Cancer, 72 (3). pp. 642-645. ISSN 0007-0920

Crew, A. Jayne, Clark, Jeremy, Fisher, Cyril, Gill, Sandra, Grimer, Robert, Mitchell, Philip, Chand, Aarti, Shipley, Janet, Gusterson, Barry A. and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1995) Fusion of SYT to two genes, SSX1 and SSX2, encoding proteins with homology to the Kruppel-associated box in human synovial sarcoma. EMBO Journal, 14 (10). pp. 2333-2340. ISSN 0261-4189

Rocques, Phillppe J., Clark, Jeremy, Ball, Sarah, Crew, Jayne, Gill, Sandra, Christodoulou, Zoe, Borts, Rhona H., Louis, Edward J., Davies, Kay E. and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1995) The human SB1.8 gene (DXS423E) encodes a putative chromosome segregation protein conserved in lower eukaryotes and prokaryotes. Human Molecular Genetics, 4 (2). pp. 243-249. ISSN 0964-6906

Huddart, R. A., Titley, J., Robertson, D., Williams, G. T., Horwich, A. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1995) Programmed cell death in response to chemotherapeutic agents in human germ cell tumour lines. European Journal of Cancer, 31 (5). pp. 739-746. ISSN 0959-8049

Shipley, J. M., Birdsall, S., Clark, J., Crew, J., Gill, S., Linehan, M., Gnarra, J., Fisher, S., Craig, I. W. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1995) Mapping the X chromosome breakpoint in two papillary renal cell carcinoma cell lines with a t(X;1)(p11.2;q21.2) and the first report of a female case. Cytogenetics and Cell Genetics, 71 (3). pp. 280-284. ISSN 0301-0171

Byrd, David A., Sweet, Deborah J., Panté, Nelly, Konstantinov, Konstantin N., Guan, Tinglu, Saphire, Andrew C.S., Mitchell, Philip J., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Aebi, Ueli and Gerace, Larry (1994) Tpr, a large coiled coil protein whose amino terminus is involved in activation of oncogenic kinases, is localized to the cytoplasmic surface of the nuclear pore complex. Journal of Cell Biology, 127 (6 I). pp. 1515-1526. ISSN 0021-9525

Pinkerton, Ross, Pritchard-Jones, Kathryn, McManus, Aidan, Carter, Richard and Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 (1994) Small-round-cell tumours of childhood. The Lancet, 344 (8924). pp. 725-729. ISSN 0140-6736

Clark, Jeremy, Rocques, Philippe J., Crew, A. Jayne, Gill, Sandra, Shipley, Janet, Chan, Andrew M.L., Gusterson, Barry A. and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1994) Identification of novel genes, SYT and SSX, involved in the t(X;18)(p11.2;q11.2) translocation found in human synovial sarcoma. Nature Genetics, 7 (4). pp. 502-508. ISSN 1061-4036

Patterson, H., Gill, S., Fisher, C., Law, M. G., Jayatilake, H., Fletcher, C. D.M., Thomas, M., Grimer, R., Gusterson, B. A. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1994) Abnormalities of the p53 MDM2 and DCC genes in human leiomyosarcomas. British Journal of Cancer, 69 (6). pp. 1052-1058. ISSN 0007-0920

Shipley, J. M., Clark, J., Crew, A. J., Birdsall, S., Rocques, P. J., Gill, S., Chelly, J., Monaco, A. P., Abe, S., Gusterson, B. A. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1994) The t(X;18)(p11.2;q11.2) translocation found in human synovial sarcomas involves two distinct loci on the X chromosome. Oncogene, 9 (5). pp. 1447-1453. ISSN 0950-9232

Wooster, R., Cleton-Jansen, A. M., Collins, N., Mangion, J., Cornelis, R. S., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Gusterson, B. A., Ponder, B. A.J., von Deimling, A., Wiestler, O. D., Cornelisse, C. J., Devilee, P. and Stratton, M. R. (1994) Instability of short tandem repeats (microsatellites) in human cancers. Nature Genetics, 6 (2). pp. 152-156. ISSN 1061-4036

Condie, Alison, Eeles, Rosalind, Borresen, Anne-Lise, Coles, Christopher, Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 and Prosser, Jane (1993) Detection of point mutations in the p53 gene: Comparison of single‐strand conformation polymorphism, constant denaturant gel electrophoresis, and hydroxylamine and osmium tetroxide techniques. Human Mutation, 2 (1). pp. 58-66. ISSN 1059-7794

Eeles, R. A., Warren, W., Knee, G., Bartek, J., Averill, D., Stratton, M. R., Blake, P. R., Tait, D. M., Lane, D. P., Easton, D. F., Yarnold, J. R., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Sloane, J. P. (1993) Constitutional mutation in exon 8 of the p53 gene in a patient with multiple primary tumours:Molecular and immunohistochemical findings. Oncogene, 8 (5). pp. 1269-1276. ISSN 0950-9232

Tobal, K., Warren, W., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, McCartney, A., Hungerford, J. and Lightman, S. (1992) Increased expression and mutation of p53 in choroidal melanoma. British Journal of Cancer, 66 (5). pp. 900-904. ISSN 0007-0920

Knight, Jennifer C., Reeves, Brian R., Kearney, Lyndal, Monaco, Anthony P., Lehrach, Hans and Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1992) Localization of the synovial sarcoma t(X;18)(p11.2;q11.2) breakpoint by fluorescence in situ hybridization. Human Molecular Genetics, 1 (8). pp. 633-637. ISSN 0964-6906

Roman, Christopher, Gregory Matera, A., Cooper, Cathleen ORCID: https://orcid.org/0000-0003-2013-8042, Artandi, Steven, Blain, Stacy, Ward, David C. and Calame, Kathryn (1992) mTFE3, an X-linked transcriptional activator containing basic helix-loop-helix and zipper domains, utilizes the zipper to stabilize both DNA binding and multimerization. Molecular and Cellular Biology, 12 (2). pp. 817-827. ISSN 0270-7306

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 (1992) The molecular and genetic characterization of human soft tissue tumors. Advances in Cancer Research, 60 (C). pp. 75-120. ISSN 0065-230X

Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1992) The met oncogene:From detection by transfection to transmembrane receptor for hepatocyte growth factor. Oncogene, 7 (1). pp. 3-7. ISSN 0950-9232

Mitchell, P. J. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1992) Nucleotide sequence analysis of human tpr cDNA clones. Oncogene, 7 (2). pp. 383-388. ISSN 0950-9232

Mitchell, P. J. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1992) The human tpr gene encodes a protein of 2094 amino acids that has extensive coiled-coil regions and an acidic C-terminal domain. Oncogene, 7 (11). pp. 2329-2333. ISSN 0950-9232

Warren, W., Eeles, R. A., Ponder, B. A.J., Easton, D. F., Averill, D., Ponder, M. A., Anderson, K., Evans, A. M., DeMars, R., Love, R., Dundas, S., Stratton, M. R., Trowbridge, P., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Peto, J. (1992) No evidence for germline mutations in exons 5-9 of the p53 gene in 25 breast cancer families. Oncogene, 7 (5). pp. 1043-1046. ISSN 0950-9232

Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1991) The role of non-ras transforming genes in chemical carcinogenesis. Environmental Health Perspectives, 93. pp. 33-40. ISSN 0091-6765

Stratton, M. R., Darling, J., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Reeves, B. R. (1991) A case of cerebellar medulloblastoma with a single chromosome abnormality. Cancer Genetics and Cytogenetics, 53 (1). pp. 101-103. ISSN 0165-4608

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Stratton, Michael R. (1991) Soft tissue tumours:The genetic basis of development. Carcinogenesis, 12 (2). pp. 155-165. ISSN 0143-3334

Patterson, H., Mitchell, P. J., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Stratton, M. R. (1990) Dinucleotide repeat polymorphism at the SIS locus. Nucleic Acids Research, 18 (19). p. 5917. ISSN 0305-1048

Scambler, Peter J., Wainwright, Brandon, Ramsay, Michele, Farrall, Martin, Bates, Gill, Ho, Meng Fat and Cooper, Colin ORCID: https://orcid.org/0000-0003-2013-8042 (1990) Analysis of the transgenome of MET transfectant cell lines reveals that MET activation is accompanied by an interstitial insertion. Human Genetics, 84 (3). pp. 274-278. ISSN 0340-6717

Stratton, M. R., Moss, S., Warren, W., Patterson, H., Clark, J., Fisher, C., Fletcher, C. D.M., Ball, A., Thomas, M., Gusterson, B. A. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1990) Mutation of the p53 gene in human soft tissue sarcomas:Association with abnormalities of the RB1 gene. Oncogene, 5 (9). pp. 1297-1301. ISSN 0950-9232

Warren, William, Clark, Jeremy P., Gardner, Emily, Harris, Gilmour, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Lawley, Philip D. (1990) Chemical induction of thymomas in AKR mice:Interaction of chemical carcinogens and endogenous murine leukemia viruses. Comparison of N‐methyl‐N‐nitrosourea and methyl methanesulphonate. Molecular Carcinogenesis, 3 (3). pp. 126-133. ISSN 0899-1987

Chan, A. M.L., Hilkens, J., Kroezen, V., Mitchell, P. J., Scambler, P., Wainwright, B. J., Williamson, R. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1989) Molecular cloning and localization to chromosome 6 of mouse INT1L1 gene. Somatic Cell and Molecular Genetics, 15 (6). pp. 555-562. ISSN 0740-7750

Stratton, M. R., Darling, J., Lantos, P. L., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Reeves, B. R. (1989) Cytogenetic abnormalities in human ependymomas. International Journal of Cancer, 44 (4). pp. 579-581. ISSN 0020-7136

Stratton, M. R., Williams, S., Fisher, C., Ball, A., Westbury, G., Gusterson, B. A., Fletcher, C. D.M., Knight, J. C., Fung, Y. K., Reeves, B. R. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1989) Structural alterations of the rb1 gene in human soft tissue tumours. British Journal of Cancer, 60 (2). pp. 202-205. ISSN 0007-0920

Stratton, M. R., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Gusterson, B. A. and Fisher, C. (1989) Detection of Point Mutations in N-ras and K-ras Genes of Human Embryonal Rhabdomyosarcomas Using Oligonucleotide Probes and the Polymerase Chain Reaction. Cancer Research, 49 (22). pp. 6324-6327. ISSN 0008-5472

Giordano, S., Ponzetto, C., Di Renzo, M. F., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Comoglio, P. M. (1989) Tyrosine kinase receptor indistinguishable from the c-met protein. Nature, 339 (6220). pp. 155-156. ISSN 0028-0836

Stratton, M. R., Marshall, C. J., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Nag, Abhijit, Jones, Jeffrey A., Smith, Roy G., Wright, Pat A., Lemoine, Nick R., Dilwyn Williams, E. and Wynford-Thomas, David (1989) Altered c-H-ras gene in non-neoplastic tissue. The Lancet, 333 (8639). pp. 668-669. ISSN 0140-6736

Stratton, M. R., Reeves, B. R. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1989) Misidentified cell [7]. Nature, 337 (6205). pp. 311-312. ISSN 0028-0836

Giordano, S., Di Renzo, M. F., Narsimhan, R. P., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Rosa, C. and Comoglio, P. M. (1989) Biosynthesis of the protein encoded by the c-met proto-oncogene. Oncogene, 4 (11). pp. 1383-1388. ISSN 0950-9232

Reeves, B. R., Smith, S., Fisher, C., Warren, W., Knight, J., Martin, C., Chan, A. M. L., Gusterson, B. A., Westbury, G. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1989) Characterization of the translocation between chromosomes X and 18 in human synovial sarcomas. Oncogene, 4 (3). pp. 373-378. ISSN 0950-9232

Ireland, Christine M., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Marshall, Christopher J., Hebert, Eric and Phillips, David H. (1988) Activating mutations in human c-ha-ras-1 gene induced by reactive derivatives of safrole and the glutamic pyrolysis product, Glu-P-3. Mutagenesis, 3 (5). pp. 429-435. ISSN 0267-8357

Tempest, P. R., Stratton, M. R. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1988) Structure of the met protein and variation of met protein kinase activity among human tumour cell lines. British Journal of Cancer, 58 (1). pp. 3-7. ISSN 0007-0920

Brookes, Peter, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Ellis, Moira V., Warren, William, Gardner, Emily and Summerhayes, Ian C. (1988) Activated Ki‐ras genes in bladder epithelial cell lines transformed by treatment of primary mouse bladder explant cultures with 7,12‐dimethylbenz[a]anthracene. Molecular Carcinogenesis, 1 (2). pp. 82-88. ISSN 0899-1987

Chan, A. M.L., King, H. W.S., Deakin, E. A., Tempest, P. R., Hilkens, J., Kroezen, V., Edwards, D. R. ORCID: https://orcid.org/0000-0002-3292-2064, Wills, A. J., Brookes, P. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1988) Characterization of the mouse met proto-oncogene. Oncogene, 2 (6). pp. 593-599. ISSN 0950-9232

Warren, W., Jacobs, S. C. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1987) A bamHI RFLP at the Pim-1 locus on mouse chromosome 17. Nucleic Acids Research, 15 (7). p. 3195. ISSN 0305-1048

Warren, W., Lawley, P. D., Gardner, E., Harris, G., Ball, J. K. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1987) Induction of thymomas by N-methyl-N-nitrosourea in AKR mice:Interaction between the chemical carcinogen and endogenous murine leukaemia viruses. Carcinogenesis, 8 (1). pp. 163-172. ISSN 0143-3334

Chan, A. M.L., King, H. W.S., Tempest, P. R., Deakin, E. A., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 and Brookes, P. (1987) Primary structure of the met protein tyrosine kinase domain. Oncogene, 1 (2). pp. 229-233. ISSN 0950-9232

Williamson, R., Wainwright, B., Cooper, C. ORCID: https://orcid.org/0000-0003-2013-8042, Scambler, P., Farrall, M., Estivill, X. and Pedersen, P. (1987) The cystic fibrosis locus. Enzyme, 38 (1-4). pp. 8-13. ISSN 0013-9432

Tempest, Philip R., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Major, Glenn N. (1986) The activated human met gene encodes a protein tyrosine kinase. FEBS Letters, 209 (2). pp. 357-361. ISSN 0014-5793

Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Tempest, P. R., Beckman, M. P., Heldin, C. H. and Brookes, P. (1986) Amplification and overexpression of the met gene in spontaneously transformed NIH3T3 mouse fibroblasts. The EMBO Journal, 5 (10). pp. 2623-2628. ISSN 0261-4189

Scambler, P. J., Law, H. Y., Williamson, R. and Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042 (1986) Chromosome mediated gene transfer of six DNA markers linked to the cystic fibrosis locus on human chromosome seven. Nucleic Acids Research, 14 (18). pp. 7159-7174. ISSN 0305-1048

Park, Morag, Dean, Michael, Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Schmidt, Martin, O'Brien, Stephen J., Blair, Donald G. and Vande Woude, George F. (1986) Mechanism of met oncogene activation. Cell, 45 (6). pp. 895-904. ISSN 0092-8674

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Park, Morag, Blair, Donald G., Tainsky, Michael A., Huebner, Kay, Croce, Carlo M. and Vande Woude, George F. (1984) Molecular cloning of a new transforming gene from a chemically transformed human cell line. Nature, 311 (5981). pp. 29-33. ISSN 0028-0836

Tainsky, Michael A., Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Giovanella, B. C. and Vande Woude, George F. (1984) An activated rasN Gene:Detected in late but not early passage human PA1 teratocarcinoma cells. Science, 225 (4662). pp. 643-645. ISSN 0036-8075

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042, Blair, Donald G., Oskarsson, Marianne K., Tainsky, Michael A., Eader, Lou A. and Vande Woude, George F. (1984) Characterization of Human Transforming Genes from Chemically Transformed, Teratocarcinoma, and Pancreatic Carcinoma Cell Lines. Cancer Research, 44 (1). pp. 1-10. ISSN 0008-5472

Blair, D. G., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Oskarsson, M. K., Eader, L. A. and Vande Woude, G. F. (1983) Tumorigenesis by transected cells in nude mice: A new method for detecting cellular transforming genes. Progress in Clinical and Biological Research, 119. pp. 79-90. ISSN 0361-7742

Blair, D. G., Cooper, C. S. ORCID: https://orcid.org/0000-0003-2013-8042, Oskarsson, M. K., Eader, L. A. and Vande Woude, G. F. (1982) New method for detecting cellular transforming genes. Science, 218 (4577). pp. 1122-1125. ISSN 0036-8075

Book Section

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Cornes, Paul (1997) Molecular genetics of soft tissue sarcomas. In: Soft Tissue Sarcomas. Cancer Treatment and Research, 91 . Springer, Boston, MA, pp. 31-50. ISBN 978-1-4613-7805-1

Cooper, Colin S. ORCID: https://orcid.org/0000-0003-2013-8042 and Clark, Jeremy (1993) Molecular biological studies on soft tissue sarcomas. In: Multidisciplinary Treatment of Soft Tissue Sarcomas. Cancer Treatment and Research, 67 . Springer, Boston, MA, pp. 37-55. ISBN 978-1-4613-6346-0