Items where School is "School of Biological Sciences

Published

Africa Pathogen Genomics Initiative (Africa PGI) (2022) The evolving SARS-CoV-2 epidemic in Africa:Insights from rapidly expanding genomic surveillance. Science, 378 (6615). ISSN 0036-8075

Aboufarrag, Hassan, Hollands, Wendy J., Percival, Jasmine, Philo, Mark, Savva, George M. and Kroon, Paul A. (2022) No effect of isolated anthocyanins from bilberry fruit and black rice on LDL cholesterol or other biomarkers of cardiovascular disease in adults with elevated cholesterol: A randomized, placebo-controlled, cross-over trial. Molecular Nutrition and Food Research, 66 (21). ISSN 1613-4125

Acquistapace, Isabella, Thompson, Emma J., Kuhn, Imke, Bedford, Mike, Brearley, Charles and Hemmings, Andrew (2022) Insights to the structural basis for the stereospecificity of the Escherichia coli phytase, AppA. International Journal of Molecular Sciences, 23 (11). ISSN 1661-6596

Adachi, Hiroaki and Kamoun, Sophien (2022) NLR receptor networks in plants. Essays in Biochemistry, 66 (5). 541–549. ISSN 0071-1365

Al-Turki, Turki A., Davy, Anthony J., Al-Ammari, B. S. and Basahi, Mohamed A. (2022) Seed germination characteristics of some medicinally important desert plants from the Arabian Peninsula. Journal of Arid Environments, 198. ISSN 0140-1963

Ali, Mennatallah A., Abdelhady, Sherien A., Yacout, Dalia M., Kandil, Lamia S., Elblehi, Samar S. and El-Mas, Mahmoud M. (2022) Gestational NSAIDs distinctly reprogram cardiac injury in preeclamptic rats: Roles of cyclooxygenase, apoptotic and autophagic trails. Life Sciences, 310. ISSN 0024-3205

Alzahrani, Salma, Applegate, Christopher, Swarbreck, David, Dalmay, Tamas, Folkes, Leighton and Moulton, Vincent (2022) Degradome assisted plant MicroRNA prediction under alternative annotation criteria. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 19 (6). pp. 3374-3383. ISSN 1545-5963

Anderson, Michelle A. E., Gonzalez, Estela, Edgington, Matthew P., Ang, Joshua X. D., Purusothaman, Deepak-Kumar, Shackleford, Lewis, Nevard, Katherine, Verkuijl, Sebald A. N., Harvey-Samuel, Tim, Leftwich, Philip T., Esvelt, Kevin and Alphey, Luke (2022) A multiplexed, confinable CRISPR/Cas9 gene drive propagates in caged Aedes aegypti populations.

Antonaci, Marco and Wheeler, Grant N. (2022) MicroRNAs in neural crest development and neurocristopathies. Biochemical Society Transactions, 50 (2). pp. 965-974. ISSN 0300-5127

Asfour, Leena, Smyth, Daniel, Whitchurch, Cynthia B., Cavaliere, Rosalia and Roland, J. Thomas (2022) Fluorescence in situ hybridization and microbial community profiling analysis of explanted cochlear implants. Acta Oto-Laryngologica, 142 (5). pp. 395-401. ISSN 0001-6489

Ashford, Fiona, Best, Angus, Dunn, Steven J., Ahmed, Zahra, Siddiqui, Henna, Melville, Jordan, Wilkinson, Samuel, Mirza, Jeremy, Cumley, Nicola, Stockton, Joanne, Ferguson, Jack, Wheatley, Lucy, Ratcliffe, Elizabeth, Casey, Anna, Plant, Tim, Quick, Joshua, Richter, Alex, Loman, Nicholas and McNally, Alan and The COVID-19 Genomics UK (COG-UK) Consortium (2022) SARS-CoV-2 testing in the community: Testing positive samples with the TaqMan SARS-CoV-2 mutation panel to find variants in real time. Journal of Clinical Microbiology, 60 (4). ISSN 0095-1137

Backhaus, Anna E., Lister, Ashleigh, Tomkins, Melissa, Adamski, Nikolai M., Simmonds, James, Macaulay, Iain, Morris, Richard J., Haerty, Wilfried and Uauy, Cristobal (2022) High expression of the MADS-box gene VRT2 increases the number of rudimentary basal spikelets in wheat. Plant Physiology, 189 (3). pp. 1536-1552. ISSN 0032-0889

Bahram, Mohammad, Espenberg, Mikk, Pärn, Jaan, Lehtovirta-Morley, Laura, Anslan, Sten, Kasak, Kuno, Kõljalg, Urmas, Liira, Jaan, Maddison, Martin, Moora, Mari, Niinemets, Ülo, Öpik, Maarja, Pärtel, Meelis, Soosaar, Kaido, Zobel, Martin, Hildebrand, Falk, Tedersoo, Leho and Mander, Ülo (2022) Structure and function of the soil microbiome underlying N2O emissions from global wetlands. Nature Communications, 13 (1). ISSN 2041-1723

Balzan, Mario V., Geneletti, Davide, Grace, Miriam, De Santis, Leticia, Tomaskinova, Judita, Reddington, Hazel, Sapundzhieva, Anna, Dicks, Lynn V. and Collier, Marcus (2022) Assessing nature-based solutions uptake in a Mediterranean climate: Insights from the case-study of Malta. Nature-Based Solutions, 2. ISSN 2772-4115

Barnsley, S. L., Lovett, A. A. and Dicks, L. V. (2022) Mapping nectar-rich pollinator floral resources using airborne multispectral imagery. Journal of Environmental Management, 313. ISSN 0301-4797

Barter, Matt J., Butcher, Andrew, Wang, Hui, Tsompani, Dimitra, Galler, Martin, Rumsby, Ellen L., Culley, Kirsty L., Clark, Ian M. and Young, David A. (2022) HDAC6 regulates NF-κB signalling to control chondrocyte IL-1-induced MMP and inflammatory gene expression. Scientific Reports, 12. ISSN 2045-2322

Bawn, Matt, Hernandez, Johana, Trampari, Eleftheria, Thilliez, Gaetan, Quince, Christopher, Webber, Mark A., Kingsley, Robert A., Hall, Neil and Macaulay, Iain C. (2022) Single-cell genomics reveals population structures from in vitro evolutionary studies of Salmonella. Microbial Genomics, 8 (9). ISSN 2057-5858

Bell, Diana and Cunningham, Andrew (2022) Monkeypox: we cannot afford to ignore yet another warning. CABI One Health. ISSN 2791-233X

Bell, Ellen A., Butler, Christopher L., Oliveira, Claudio, Marburger, Sarah, Yant, Levi and Taylor, Martin I. (2022) Transposable element annotation in non-model species ‐ the benefits of species‐specific repeat libraries using semi-automated EDTA and DeepTE de novo pipelines. Molecular Ecology Resources, 22 (2). pp. 823-833. ISSN 1755-098X

Bengtsson, Rebecca J., Simpkin, Adam J., Pulford, Caisey V., Low, Ross, Rasko, David A., Rigden, Daniel J., Hall, Neil, Barry, Eileen M., Tennant, Sharon M. and Baker, Kate S. (2022) Pathogenomic analyses of Shigella isolates inform factors limiting shigellosis prevention and control across LMICs. Nature Microbiology, 7 (2). pp. 251-261. ISSN 2058-5276

Bentley, Alison R., Donovan, Jason, Sonder, Kai, Baudron, Frédéric, Lewis, Janet M., Voss, Rachel, Rutsaert, Pieter, Poole, Nigel, Kamoun, Sophien, Saunders, Diane G. O., Hodson, David, Hughes, David P., Negra, Christine, Ibba, Maria Itria, Snapp, Sieglinde, Sida, Tesfaye Shiferaw, Jaleta, Moti, Tesfaye, Kindie, Becker-Reshef, Inbal and Govaerts, Bram (2022) Near- to long-term measures to stabilize global wheat supplies and food security. Nature Food, 3 (7). pp. 483-486. ISSN 2662-1355

Benwell, Christopher J., Johnson, Robert T., Taylor, James A. G. E., Price, Christopher A. and Robinson, Stephen D. (2022) Endothelial VEGFR coreceptors neuropilin-1 and neuropilin-2 are essential for tumor angiogenesis. Cancer Research Communications, 2 (12). 1626–1640. ISSN 2767-9764

Bergin, Sean A., Zhao, Fang, Ryan, Adam P., Müller, Carolin A., Nieduszynski, Conrad A., Zhai, Bing, Rolling, Thierry, Hohl, Tobias M., Morio, Florent, Scully, Jillian, Wolfe, Kenneth H. and Butler, Geraldine (2022) Systematic analysis of copy number variations in the pathogenic yeast Candida parapsilosis identifies a gene amplification in RTA3 that is associated with drug resistance. mBIO, 13 (5). ISSN 2150-7511

Bergström, Anders, Stanton, David W. G., Taron, Ulrike H., Frantz, Laurent, Sinding, Mikkel-Holger S., Ersmark, Erik, Pfrengle, Saskia, Cassatt-Johnstone, Molly, Lebrasseur, Ophélie, Girdland-Flink, Linus, Fernandes, Daniel M., Ollivier, Morgane, Speidel, Leo, Gopalakrishnan, Shyam, Westbury, Michael V., Ramos-Madrigal, Jazmin, Feuerborn, Tatiana R., Reiter, Ella, Gretzinger, Joscha, Münzel, Susanne C., Swali, Pooja, Conard, Nicholas J., Carøe, Christian, Haile, James, Linderholm, Anna, Androsov, Semyon, Barnes, Ian, Baumann, Chris, Benecke, Norbert, Bocherens, Hervé, Brace, Selina, Carden, Ruth F., Drucker, Dorothée G., Fedorov, Sergey, Gasparik, Mihály, Germonpré, Mietje, Grigoriev, Semyon, Groves, Pam, Hertwig, Stefan T., Ivanova, Varvara V., Janssens, Luc, Jennings, Richard P., Kasparov, Aleksei K., Kirillova, Irina V., Kurmaniyazov, Islam, Kuzmin, Yaroslav V., Kosintsev, Pavel A., Lázničková-Galetová, Martina, Leduc, Charlotte, Nikolskiy, Pavel, Nussbaumer, Marc, O’Drisceoil, Cóilín, Orlando, Ludovic, Outram, Alan, Pavlova, Elena Y., Perri, Angela R., Pilot, Małgorzata, Pitulko, Vladimir V., Plotnikov, Valerii V., Protopopov, Albert V., Rehazek, André, Sablin, Mikhail, Seguin-Orlando, Andaine, Storå, Jan, Verjux, Christian, Zaibert, Victor F., Zazula, Grant, Crombé, Philippe, Hansen, Anders J., Willerslev, Eske, Leonard, Jennifer A., Götherström, Anders, Pinhasi, Ron, Schuenemann, Verena J., Hofreiter, Michael, Gilbert, M. Thomas P., Shapiro, Beth, Larson, Greger, Krause, Johannes, Dalén, Love and Skoglund, Pontus (2022) Grey wolf genomic history reveals a dual ancestry of dogs. Nature, 607 (7918). pp. 313-320. ISSN 0028-0836

Bidula, Stefan, Nadzirin, Izzuddin Bin, Cominetti, Marco, Hickey, Harry, Cullum, Sean A., Searcey, Mark, Schmid, Ralf and Fountain, Samuel J. (2022) Structural basis of the negative allosteric modulation of 5-BDBD at human P2X4 receptors. Molecular Pharmacology, 101 (1). pp. 33-44. ISSN 1521-0111

Billmeier, Martina, Green, Darrell, Hall, Adam, Turnbull, Carly, Singh, Archana, Xu, Ping, Moxon, Simon and Dalmay, Tamas (2022) Mechanistic insights into non-coding Y RNA processing. RNA Biology, 19 (1). pp. 468-480. ISSN 1547-6286

Blaxter, Mark, Archibald, John M., Childers, Anna K., Coddington, Jonathan A., Crandall, Keith A., Di Palma, Federica, Durbin, Richard, Edwards, Scott V., Graves, Jennifer A.M., Hackett, Kevin J., Hall, Neil, Jarvis, Erich D., Johnson, Rebecca N., Karlsson, Elinor K., Kress, W. John, Kuraku, Shigehiro, Lawniczak, Mara K.N., Lindblad-Toh, Kerstin, Lopez, Jose V., Moran, Nancy A., Robinson, Gene E., Ryder, Oliver A., Shapiro, Beth, Soltis, Pamela S., Warnow, Tandy, Zhang, Guojie and Lewin, Harris A. (2022) Why sequence all eukaryotes? Proceedings of the National Academy of Sciences of the United States of America, 119 (4). ISSN 0027-8424

Bohmann, Kristine, Elbrecht, Vasco, Carøe, Christian, Bista, Iliana, Leese, Florian, Bunce, Michael, Yu, Douglas W., Seymour, Mathew, Dumbrell, Alex J. and Creer, Simon (2022) Strategies for sample labelling and library preparation in DNA metabarcoding studies. Molecular Ecology Resources, 22 (4). pp. 1231-1246. ISSN 1755-098X

Bohálová, Natália, Dobrovolná, Michaela, Brázda, Václav and Bidula, Stefan (2022) Conservation and over-representation of G-quadruplex sequences in regulatory regions of mitochondrial DNA across distinct taxonomic sub-groups. Biochimie, 194. pp. 28-34. ISSN 0300-9084

Boix, Emmanuelle, Coroller, Louis, Couvert, Olivier, Planchon, Stella, van Vliet, Arnoud H. M., Brunt, Jason, Peck, Michael W., Rasetti-Escargueil, Christine, Lemichez, Emmanuel, Popoff, Michel R. and André, Stéphane (2022) Synergistic interaction between pH and NaCl in the limits of germination and outgrowth of Clostridium sporogenes and Group I Clostridium botulinum vegetative cells and spores after heat treatment. Food Microbiology, 106. ISSN 0740-0020

Bollmann-Giolai, Anita, Malone, Jacob G. and Arora, Sanu (2022) Diversity, detection and exploitation: linking soil fungi and plant disease. Current Opinion in Microbiology, 70. ISSN 1369-5274

Borodin, Pavel, Chen, Augustin, Forstmeier, Wolfgang, Fouché, Simone, Malinovskaya, Lyubov, Pei, Yifan, Reifová, Radka, Ruiz-Ruano, Francisco J., Schlebusch, Stephen A., Sotelo-Muñoz, Manuelita, Torgasheva, Anna, Vontzou, Niki and Suh, Alexander (2022) Mendelian nightmares: The germline-restricted chromosome of songbirds. Chromosome Research, 30 (2-3). 255–272. ISSN 0967-3849

Borumand, Maryam and Ellis, Vincent (2022) Metal ions bound to prion protein affect its interaction with plasminogen activation system. The Protein Journal, 41. 88–96. ISSN 1572-3887

Bousfield, Christopher G., Massam, Mike R., Peres, Carlos A. and Edwards, David P. (2022) Carbon payments can cost-effectively improve logging sustainability in the Amazon. Journal of Environmental Management, 314. ISSN 0301-4797

Bowater, Richard (2022) DNA Structure and Replication. MASSOLIT.

Bowater, Richard P., Bohálová, Natália and Brázda, Václav (2022) Interaction of proteins with inverted repeats and cruciform structures in nucleic acids. International Journal of Molecular Sciences, 23 (11). ISSN 1661-6596

Brown, Thomas J., Dugdale, Hannah L., Hammers, Martijn, Komdeur, Jan and Richardson, David S. (2022) Seychelles warblers with silver spoons: Juvenile body mass is a lifelong predictor of annual survival, but not annual reproduction or senescence. Ecology and Evolution, 12 (7). ISSN 2045-7758

Brown, Thomas J., Spurgin, Lewis G., Dugdale, Hannah L., Komdeur, Jan, Burke, Terry and Richardson, David S. (2022) Causes and consequences of telomere lengthening in a wild vertebrate population. Molecular Ecology, 31 (23). pp. 5933-5945. ISSN 0962-1083

Brázda, Václav, Bohálová, Natália and Bowater, Richard P. (2022) New telomere to telomere assembly of human chromosome 8 reveals a previous underestimation of G-quadruplex forming sequences and inverted repeats. Gene, 810. ISSN 0378-1119

Brázda, Václav and Bowater, Richard (2022) Special Issue "Impacts of Molecular Structure on Nucleic Acid-Protein Interactions". International Journal of Molecular Sciences, 24 (1). ISSN 1661-6596

Buchan, Claire, Franco, Aldina M. A., Catry, Inês, Gamero, Anna, Klvaňová, Alena and Gilroy, James J. (2022) Spatially explicit risk mapping reveals direct anthropogenic impacts on migratory birds. Global Ecology and Biogeography, 31 (9). pp. 1707-1725. ISSN 1466-822X

Busana, Michela, Childs, Dylan Z., Burke, Terrence A., Komdeur, Jan, Richardson, David S. and Dugdale, Hannah L. (2022) Population level consequences of facultatively cooperative behaviour in a stochastic environment. Journal of Animal Ecology, 91 (1). pp. 224-240. ISSN 0021-8790

Camacho, Juan Pedro M., Cabrero, Josefa, López-León, María Dolores, Martín-Peciña, María, Perfectti, Francisco, Garrido-Ramos, Manuel A. and Ruiz-Ruano, Francisco J. (2022) Satellitome comparison of two oedipodine grasshoppers highlights the contingent nature of satellite DNA evolution. BMC Biology, 20. ISSN 1741-7007

Cerca, José, Petersen, Bent, Lazaro-Guevara, José Miguel, Rivera-Colón, Angel, Birkeland, Siri, Vizueta, Joel, Li, Siyu, Li, Qionghou, Loureiro, João, Kosawang, Chatchai, Díaz, Patricia Jaramillo, Rivas-Torres, Gonzalo, Fernández-Mazuecos, Mario, Vargas, Pablo, McCauley, Ross A., Petersen, Gitte, Santos-Bay, Luisa, Wales, Nathan, Catchen, Julian M., Machado, Daniel, Nowak, Michael D., Suh, Alexander, Sinha, Neelima R., Nielsen, Lene R., Seberg, Ole, Gilbert, M. Thomas P., Leebens-Mack, James H., Rieseberg, Loren H. and Martin, Michael D. (2022) The genomic basis of the plant island syndrome in Darwin’s giant daisies. Nature Communications, 13 (1). ISSN 2041-1723

Charity, Oliver J., Acton, Luke, Bawn, Matt, Tassinari, Eleonora, Thilliez, Gaёtan, Chattaway, Marie A., Dallman, Timothy J., Petrovska, Liljana and Kingsley, Robert A. (2022) Increased phage resistance through lysogenic conversion accompanying emergence of monophasic Salmonella Typhimurium ST34 pandemic strain. Microbial Genomics, 8 (11). ISSN 2057-5858

Ciezarek, A., Ford, Antonia G. P., Etherington, Graham J., Kasozi, Nasser, Malinsky, Milan, Mehta, Tarang K., Penso-Dolfin, Luca, Ngatunga, Benjamin P., Shechonge, Asilatu, Tamatamah, Rashid, Haerty, Wilfried, Di Palma, Federica, Genner, Martin J. and Turner, George F. (2022) Whole genome resequencing data enables a targeted SNP panel for conservation and aquaculture of Oreochromis cichlid fishes. Aquaculture, 548. ISSN 0044-8486

Clarke, Thomas Andrew (2022) Plugging into bacterial nanowires: A comparison of model electrogenic organisms. Current Opinion in Microbiology, 66. pp. 56-62. ISSN 1369-5274

Coletto, Erika, Latousakis, Dimitrios, Pontifex, Matthew G., Crost, Emmanuelle H., Vaux, Laura, Perez Santamarina, Estella, Goldson, Andrew, Brion, Arlaine, Hajihosseini, Mohammad K., Vauzour, David, Savva, George M. and Juge, Nathalie (2022) The role of the mucin-glycan foraging Ruminococcus gnavus in the communication between the gut and the brain. Gut Microbes, 14 (1). ISSN 1949-0976

Concepcion, Juan Carlos De la, Fujisaki, Koki, Bentham, Adam R., Mireles, Neftaly Cruz, Hernandez, Victor Sanchez de Medina, Shimizu, Motoki, Lawson, David M., Kamoun, Sophien, Terauchi, Ryohei and Banfield, Mark J. (2022) A blast fungus zinc-finger fold effector binds to a hydrophobic pocket in host Exo70 proteins to modulate immune recognition in rice. Proceedings of the National Academy of Sciences, 119 (43). ISSN 0027-8424

Coomes, Jenny R., Davidson, Gabrielle L., Reichert, Michael S., Kulahci, Ipek G., Troisi, Camille A. and Quinn, John L. (2022) Inhibitory control, exploration behaviour and manipulated ecological context are associated with foraging flexibility in the great tit. Journal of Animal Ecology, 91 (2). pp. 320-333. ISSN 0021-8790

Cope, Hilary, Ivimey-Cook, Edward R. and Moorad, Jacob (2022) Triparental ageing in a laboratory population of an insect with maternal care. Behavioral Ecology, 33 (6). pp. 1123-1132. ISSN 1045-2249

Cram, Dominic L. (2022) Oxidative stress and cognition in ecology. Journal of Zoology, 318 (4). pp. 229-240. ISSN 0952-8369

Cram, Dominic L., van der Wal, Jessica E. M., Uomini, Natalie, Cantor, Mauricio, Afan, Anap I., Attwood, Mairenn C., Amphaeris, Jenny, Balasani, Fatima, Blair, Cameron J., Bronstein, Judith L., Buanachique, Iahaia O., Cuthill, Rion R. T., Das, Jewel, Daura-Jorge, Fábio G., Deb, Apurba, Dixit, Tanmay, Dlamini, Gcina S., Dounias, Edmond, Gedi, Isa I., Gruber, Martin, Hoffmann, Lilian S., Holzlehner, Tobias, Isack, Hussein A., Laltakia, Eliupendo A., Lloyd-Jones, David J., Lund, Jess, Machado, Alexandre M. S., Mahadevan, L., Moreno, Ignacio B., Nwaogu, Chima J., Pierotti, Raymond, Rucunua, Seliano A., dos Santos, Wilson F., Serpa, Nathalia, Smith, Brian D., Sridhar, Hari, Tolkova, Irina, Tun, Tint, Valle-Pereira, João V. S., Wood, Brian M., Wrangham, Richard W. and Spottiswoode, Claire N. (2022) The ecology and evolution of human-wildlife cooperation. People and Nature, 4 (4). pp. 841-855. ISSN 2575-8314

Crossfield, Matthew, Gilroy, Rachel, Ravi, Anuradha, Baker, David, La Ragione, Roberto M. and Pallen, Mark J. (2022) Archaeal and bacterial metagenome-assembled genome sequences derived from pig feces. Microbiology Resource Announcements, 11 (1).

Crossman, Lisa C. (2022) Deep Recurrent Neural Networks for the Generation of Synthetic Coronavirus Spike Protein Sequences. In: Computational Intelligence Methods for Bioinformatics and Biostatistics. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) . Springer, Virtual, Online, pp. 217-226. ISBN 9783031208362

Cuitun-Coronado, David, Rees, Hannah, Colmer, Joshua, Hall, Anthony, de Barros Dantas, Luíza L. and Dodd, Antony N. (2022) Circadian and diel regulation of photosynthesis in the bryophyte Marchantia polymorpha. Plant Cell and Environment, 45 (8). pp. 2381-2394. ISSN 0140-7791

Darrington, Mike, Leftwich, Philip T., Holmes, Neil A., Friend, Lucy A., Clarke, Naomi V. E., Worsley, Sarah F., Margaritopolous, John T., Hogenhout, Saskia A., Hutchings, Matthew I. and Chapman, Tracey (2022) Characterisation of the symbionts in the Mediterranean fruit fly gut. Microbial Genomics, 8 (4). ISSN 2057-5858

Davidson, Gabrielle L., Reichert, Michael S., Coomes, Jenny R., Kulahci, Ipek G., de la Hera, Iván and Quinn, John L. (2022) Inhibitory control performance is repeatable over time and across contexts in a wild bird population. Animal Behaviour, 187. pp. 305-318. ISSN 0003-3472

Davies, Charli S., Worsley, Sarah, Maher, Kathryn, Komdeur, Jan, Burke, Terry, Dugdale, Hannah and Richardson, David S. (2022) Immunogenetic variation shapes the gut microbiome in a natural vertebrate population. Microbiome, 10. ISSN 2049-2618

Davy, Anthony J. and Lee, John A. (2022) Professor Donald Pigott 1928-2022. Obituary. The Niche, British Ecological Society, 53 (4). pp. 50-51. ISSN 2631-9306

Dawoud, Marwa M., Jones, Dylan T., Chelala, Claude, Abdou, Asmaa G., Dreger, Sally A., Asaad, Nancy, Abd El-Wahed, Moshirah and Jones, Louise (2022) Expression profile of myoepithelial cells in DCIS: Do they change from protective angels to wicked witches? Applied Immunohistochemistry and Molecular Morphology, 30 (6). pp. 397-409. ISSN 1541-2016

Day-Walsh, Priscilla, Keeble, Bryony, Pirabagar, Gothai, Fountain, Samuel and Kroon, Paul (2022) Transcriptional and post-translational regulation of junctional adhesion molecule-B (JAM-B) in leukocytes under inflammatory stimuli. International Journal of Molecular Sciences, 23 (15). ISSN 1661-6596

De-Souza, Evandro A., Cummins, Nadia and Taylor, Rebecca C. (2022) IRE-1 endoribonuclease activity declines early in C. elegans adulthood and is not rescued by reduced reproduction. Frontiers in Aging, 3. ISSN 2673-6217

Demeter, Amanda, Jacomin, Anne-Claire, Gul, Lejla, Lister, Ashleigh, Lipscombe, James, Invernizzi, Rachele, Branchu, Priscilla, Macaulay, Iain, Nezis, Ioannis P., Kingsley, Robert A., Korcsmaros, Tamas and Hautefort, Isabelle (2022) Computational prediction and experimental validation of Salmonella Typhimurium SopE-mediated fine-tuning of autophagy in intestinal epithelial cells. Frontiers in Cellular and Infection Microbiology, 12. ISSN 2235-2988

Duxbury, Elizabeth M. L., Carlsson, Hanne, Sales, Kris, Sultanova, Zahida, Immler, Simone, Chapman, Tracey and Maklakov, Alexei A. (2022) Multigenerational downregulation of insulin/IGF-1 signaling in adulthood improves lineage survival, reproduction, and fitness in Caenorhabditis elegans supporting the developmental theory of ageing. Evolution, 76 (12). pp. 2829-2845. ISSN 0014-3820

Eales, Oliver, Page, Andrew J., de Oliveira Martins, Leonardo, Wang, Haowei, Bodinier, Barbara, Haw, David, Jonnerby, Jakob, Atchison, Christina, Ashby, Deborah, Barclay, Wendy, Taylor, Graham, Cooke, Graham, Ward, Helen, Darzi, Ara, Riley, Steven, Chadeau-Hyam, Marc, Donnelly, Christl A. and Elliott, Paul and The COVID-19 Genomics UK (COG-UK) Consortium (2022) SARS-CoV-2 lineage dynamics in England from September to November 2021: high diversity of Delta sub-lineages and increased transmissibility of AY.4.2. BMC Infectious Diseases, 22. ISSN 1471-2334

Ebenezer, Thankgod Echezona, Low, Ross S., O'Neill, Ellis Charles, Huang, Ishuo, DeSimone, Antonio, Farrow, Scott C., Field, Robert A., Ginger, Michael L., Guerrero, Sergio Adrián, Hammond, Michael, Hampl, Vladimír, Horst, Geoff, Ishikawa, Takahiro, Karnkowska, Anna, Linton, Eric W., Myler, Peter, Nakazawa, Masami, Cardol, Pierre, Sánchez-Thomas, Rosina, Saville, Barry J., Shah, Mahfuzur R., Simpson, Alastair G. B., Sur, Aakash, Suzuki, Kengo, Tyler, Kevin M., Zimba, Paul V., Hall, Neil and Field, Mark C. (2022) Euglena International Network (EIN): Driving euglenoid biotechnology for the benefit of a challenged world. Biology Open, 11 (11). ISSN 2046-6390

Edmunds, Kelly (2022) Boosting the resilience factor during the transition to university; unravelling the fear of failure. In: Biosciences Education Summit, 2022-09-06 - 2022-09-07, Cardiff University.

Eggermann, Thomas, Yapici, Elzem, Bliek, Jet, Pereda, Arrate, Begemann, Matthias, Russo, Silvia, Tannorella, Pierpaola, Calzari, Luciano, de Nanclares, Guiomar Perez, Lombardi, Paola, Temple, I. Karen, Mackay, Deborah, Riccio, Andrea, Kagami, Masayo, Ogata, Tsutomu, Lapunzina, Pablo, Monk, David, Maher, Eamonn R. and Tümer, Zeynep (2022) Trans-acting genetic variants causing multilocus imprinting disturbance (MLID): common mechanisms and consequences. Clinical Epigenetics, 14. ISSN 1868-7075

Etherington, G. J., Nash, W., Ciezarek, A., Mehta, T. K., Barria, A., Peñaloza, C., Khan, M. G. Q., Durrant, A., Forrester, N., Fraser, F., Irish, N., Kaithakottil, G. G., Lipscombe, J., Trong, T., Watkins, C., Swarbreck, D., Angiolini, E., Cnaani, A., Gharbi, K., Houston, R. D., Benzie, J. A. H. and Haerty, W. (2022) Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus. BMC Genomics, 23. ISSN 1471-2164

Etherington, Graham J., Ciezarek, Adam, Shaw, Rebecca, Michaux, Johan, Croose, Elizabeth, Haerty, Wilfried and Di Palma, Federica (2022) Extensive genome introgression between domestic ferret and European polecat during population recovery in Great Britain. Journal of Heredity, 113 (5). pp. 500-515. ISSN 0022-1503

Faba-Rodriguez, Raquel, Gu, Yinghong, Salmon, Melissa, Dionisio, Giuseppe, Brinch-Pedersen, Henrik A., Brearley, Charles A. and Hemmings, Andrew M. (2022) Structure of a cereal purple acid phytase provides new insights to phytate degradation in plants. Plant Communications, 3 (2). ISSN 2590-3462

Fang, Jie, Adams, Jonathan M., Deng, Yongcui, Zhu, Xinshu, Hernández, Marcela and Liu, Yongqin (2022) Propagule limitation affects the response of soil methane oxidizer community to increased salinity. Geoderma, 426. ISSN 0016-7061

Farhan Ul Haque, Muhammad, Hernández, Marcela, Crombie, Andrew T. and Murrell, J. Colin (2022) Identification of active gaseous-alkane degraders at natural gas seeps. The ISME Journal, 16 (7). 1705–1716. ISSN 1751-7362

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Piper, Samuel E. H., Casadevall, Carla, Reisner, Erwin, Clarke, Thomas A., Jeuken, Lars J. C., Gates, Andrew J. and Butt, Julea N. (2022) Photocatalytic removal of the greenhouse gas nitrous oxide by liposomal microreactors. Angewandte Chemie-International Edition, 61 (41). ISSN 1433-7851

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Ponting, Chris P. and Haerty, Wilfried (2022) Genome-wide analysis of human long noncoding RNAs: A provocative review. Annual Review of Genomics and Human Genetics, 23. pp. 153-172. ISSN 1545-293X

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Proctor, Matthew S., Morey-Burrows, Felix S., Canniffe, Daniel P., Martin, Elizabeth C., Swainsbury, David J. K., Johnson, Matthew P., Hunter, C. Neil, Sutherland, George A. and Hitchcock, Andrew (2022) Zeta-carotene isomerase (Z-ISO) is required for light-independent carotenoid biosynthesis in the cyanobacterium Synechocystis sp. PCC 6803. Microorganisms, 10 (9). ISSN 2076-2607

Pung, Rachael, Firth, Josh A., Spurgin, Lewis G., Lee, Vernon J. and Kucharski, Adam J. and Singapore CruiseSafe working group, CMMID COVID-19 working group (2022) Using high-resolution contact networks to evaluate SARS-CoV-2 transmission and control in large-scale multi-day events. Nature Communications, 13. ISSN 2041-1723

Pálsdottír, Aldís Erna, Gill, Jennifer A., Pálsson, Snæbjörn, Alves, José A., Méndez, Veronica, Þórisson, Böðvar and Gunnarsson, Tómas G. (2022) Effects of overhead power-lines on the density of groundnesting birds in open sub-arctic habitats. Ibis, 164 (4). pp. 1257-1264. ISSN 0019-1019

Pálsdóttir, Aldís Erna, Gill, Jennifer A., Alves, Jose A., Pálsson, Snæbjörn, Méndez, Veronica, Ewing, Harry and Gunnarsson, Tómas G. (2022) Subarctic afforestation: Effects of forest plantations on ground-nesting birds in lowland Iceland. Journal of Applied Ecology, 59 (10). pp. 2456-2467. ISSN 0021-8901

Quesada-Vázquez, Sergio, Bone, Caitlin, Saha, Shikha, Triguero, Iris, Colom-Pellicer, Marina, Aragonès, Gerard, Hildebrand, Falk, del Bas, Josep M., Caimari, Antoni, Beraza, Naiara and Escoté, Xavier (2022) Microbiota dysbiosis and gut barrier dysfunction associated with non-alcoholic fatty liver disease are modulated by a specific metabolic cofactors’ combination. International Journal of Molecular Sciences, 23 (22). ISSN 1661-6596

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Sheppard, Eleanor C., Martin, Claudia A., Armstrong, Claire, González‐Quevedo, Catalina, Illera, Juan Carlos, Suh, Alexander, Spurgin, Lewis G. and Richardson, David S. (2022) Genomic associations with poxvirus across divergent island populations in Berthelot's pipit. Molecular Ecology, 31 (11). pp. 3154-3173. ISSN 0962-1083

Shimizu, Motoki, Hirabuchi, Akiko, Sugihara, Yu, Abe, Akira, Takeda, Takumi, Kobayashi, Michie, Hiraka, Yukie, Kanzaki, Eiko, Oikawa, Kaori, Saitoh, Hiromasa, Langner, Thorsten, Banfield, Mark J., Kamoun, Sophien and Terauchi, Ryohei (2022) A genetically linked pair of NLR immune receptors shows contrasting patterns of evolution. Proceedings of the National Academy of Sciences of the United States of America, 119 (27). ISSN 0027-8424

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Weldon, Shannon A. and Münsterberg, Andrea E. (2022) Somite development and regionalisation of the vertebral axial skeleton. Seminars in Cell & Developmental Biology, 127. pp. 10-16. ISSN 1084-9521

Whitfield, Hayley, Laurendon, Caroline, Rochell, Samuel J., Dridi, Sami, Lee, S. A., Dale, Tom, York, Tara, Kuehn, Imke, Bedford, Michael R. and Brearley, Charles A. (2022) Effect of phytase supplementation on plasma and organ myo-inositol content and erythrocyte inositol phosphates as pertaining to breast meat quality issues in chickens. Journal of Applied Animal Nutrition, 10 (2). pp. 45-57. ISSN 2049-257X

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Wood, Emma M., Capilla-Lasheras, Pablo, Cram, Dominic L., Walker, Lindsay A., York, Jenny E., Lang, Anke, Hamilton, Patrick B., Tyler, Charles R. and Young, Andrew J. (2022) Social dominance and rainfall predict telomere dynamics in a cooperative arid-zone bird. Molecular Ecology, 31 (23). pp. 6141-6154. ISSN 0962-1083

Worsley, Sarah F., Davies, Charli S., Mannarelli, Maria-Elena, Komdeur, Jan, Dugdale, Hannah L. and Richardson, David S. (2022) Assessing the causes and consequences of gut mycobiome variation in a wild population of the Seychelles warbler. Microbiome, 10. ISSN 2049-2618

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Unpublished

Alshammari, Mamdouh (2022) Characterisation of miRNA during drought stress in wheat plants. Doctoral thesis, University of East Anglia.

Ardan, Dalal (2022) Discovery of a novel dsRNA virus in Trichomonas gallinae. Doctoral thesis, University of East Anglia.

Arekion, Kelly Rebekah (2022) Exploring human skin explant models for inflammation and impaired wound healing. Masters thesis, University of East Anglia.

Atkins, Elliott (2022) Understanding the genetic regulation of acidity in Citrus fruit. Doctoral thesis, University of East Anglia.

Backhaus, Anna (2022) Tracing the formation of wheat spikelets through time and space. Doctoral thesis, University of East Anglia.

Bawazeer, Afrah (2022) Function of a microRNA gene containing an intron in Solanum lycopersicum. Doctoral thesis, University of East Anglia.

Bellow, Robert (2022) Genetic control of tissue tension in plants. Doctoral thesis, University of East Anglia.

Benwell, Christopher (2022) Neuropilin-2 as a Novel Angiogenic Player: deciphering the contributions of neuropilin-2 during developmental and pathological angiogenesis. Doctoral thesis, University of East Anglia.

Birsan, Rares (2022) Enrichment of brewer’s spent grain polyphenols and assessment of their role in inhibition of cholinesterases, amylase and glucosidase. Doctoral thesis, University of East Anglia.

Brown, Thomas (2022) Measuring and understanding senescence in a wild population. Doctoral thesis, University of East Anglia.

Butler, Christopher (2022) Fishing for Junk: investigating the genomic and evolutionary roles of transposable element expansion within neotropical catfish. Doctoral thesis, University of East Anglia.

Callow, Chloe (2022) A correlation between tellurite resistance and nitric oxide detoxification in Salmonella Typhimurium. Masters thesis, University of East Anglia.

Canham, James (2022) Characterisation of aphid-derived components involved in plant innate immune responses. Doctoral thesis, University of East Anglia.

Cardwell-Brown, Alfie (2022) Understanding the interactions between Neuropilin-1 and Neuropilin-2 during developmental angiogenesis. Masters thesis, University of East Anglia.

Cassettari, Gemma (2022) SepF: a link between cell division and polar growth in Streptomyces coelicolor. Doctoral thesis, University of East Anglia.

Casson, Rebecca (2022) Directing Biosynthesis of Bioactive Triterpenes for Pharmaceutical Applications. Doctoral thesis, University of East Anglia.

Champion, Jordan Hannah Rose (2022) Exploiting a human intestinal organoid platform for development of personalised medicine for colon cancer. Masters thesis, University of East Anglia.

Chen, Jiawen (2022) Characterisation of SS4 and MRC in starch granule initiation. Doctoral thesis, University of East Anglia.

Clark, Lucy (2022) Investigating the Key cell division proteins FtsZ and SepF in Streptomyces coelicolor. Doctoral thesis, University of East Anglia.

Cruz Mireles, Neftaly (2022) Identification and characterisation of novel components of the Pmk1 MAP kinase pathway during plant infection by the rice blast fungus Magnaporthe oryzae. Doctoral thesis, University of East Anglia.

Dangeville, Pierre (2022) Role of heterotrimeric G protein β subunit during root endosymbioses. Doctoral thesis, University of East Anglia.

Diez, Isabel (2022) Quinolone drugs: investigating pathways of DNA damage repair and antibiotic resistance. Doctoral thesis, University of East Anglia.

Doherty, Rebecca (2022) Temperature and vernalisation regulation of seed properties in Brassica napus. Doctoral thesis, University of East Anglia.

Eldaly, Dalyan (2022) Investigating the expression of P2 purinergic receptors in sympathetic ganglia and perivascular nerves of arteries. Doctoral thesis, University of East Anglia.

Fioratti, Marco (2022) Cover crops and below-ground biodiversity: an ecological outlook. Doctoral thesis, University of East Anglia.

Ford, Jonathan (2022) Elucidating the Structure and Bioactivity of a Rhodococcus fascians Non-Ribosomal Peptide. Doctoral thesis, University of East Anglia.

Gate, Thomas (2022) Molecular and Cellular Analysis of Zinc Homeostasis and its Interaction with Auxin in Arabidopsis thaliana. Doctoral thesis, University of East Anglia.

Gilmartin, Megan (2022) Ligands of Inositol Polyphosphate Binding Proteins. Doctoral thesis, University of East Anglia.

Gomez Gutierrez, Abraham (2022) Downy mildew resistance in B. oleracea. Doctoral thesis, University of East Anglia.

Gonzalez Penades, Lola (2022) Identifying genes underlying FHB QTLs in bread wheat. Doctoral thesis, University of East Anglia.

Gooch, Harriet (2022) Insects as models to study the impact of antibiotics and microbiota therapies on the human gut microbiome: reducing the use of animals in research. Doctoral thesis, University of East Anglia.

Graziano, Marco (2022) Improving Atlantic Salmon (Salmo salar) conservation and farming sustainability, through the gamete level. Doctoral thesis, University of East Anglia.

Griffiths, Ryan (2022) Structure and function of the accessory secretion system in gut symbionts. Doctoral thesis, University of East Anglia.

Grubb, Lauren (2022) Investigating the regulation of nuclear calcium oscillation in plant endosymbiosis. Doctoral thesis, University of East Anglia.

Gul, Lejla (2022) Bioinformatic pipelines to reconstruct and analyse intercellular and hostmicrobe interactions affecting epithelial signalling pathways. Doctoral thesis, University of East Anglia.

Hafeez, Amber (2022) EXPLORING THE GENETIC DIVERSITY IN WHEAT FOR RESISTANCE TO SEPTORIA TRITICI BLOTCH. Doctoral thesis, University of East Anglia.

Haider, Kathrin (2022) How the structure and physical chemistry of dietary fibre can help make healthier foods. Doctoral thesis, University of East Anglia.

Hamilton, Jacob (2022) Understanding the biochemical warfare in the nests of fungus-growing ants. Doctoral thesis, University of East Anglia.

He, Sining (2022) The inositol pyrophosphates are essential for the development of mammals. Doctoral thesis, University of East Anglia.

Hernando Callejo, Pedro J. (2022) Carbohydrate-based detection as the basis of new diagnostics for infectious diseases. Doctoral thesis, University of East Anglia.

Hillman, Siobhan (2022) Population Genetics and Ecology of the Sugar Beet Leaf Miners. Doctoral thesis, University of East Anglia.

Hyde, Anne Cathrine (2022) Identification of Cis-Regulatory elements specific for the Neural Crest during Xenopus development. Masters thesis, University of East Anglia.

Jan-Smith, Eliot (2022) The Biosynthesis of Aescin. Doctoral thesis, University of East Anglia.

Jo, Seohyun (2022) Investigating the biosynthesis of major saponariosides in soapwort (Saponaria officinalis). Doctoral thesis, University of East Anglia.

Jones, Carmen (2022) Comparison of Shotgun Fragment Library Approaches for Functional Enhancer Screen of the Six3 Gene. Masters thesis, University of East Anglia.

Leher, Siegfried (2022) Magnesium Homeostasis in Plants. Doctoral thesis, University of East Anglia.

Long, Megan (2022) Deep Learning for the Identification and Quantification of Wheat Disease. Doctoral thesis, University of East Anglia.

Madgwick, Matthew (2022) Identification of prognostic indicators of healthy and unhealthy conditions with a machine learning-based systems biology approach using gut microbiome data. Doctoral thesis, University of East Anglia.

Martinez Perez, Javier (2022) Identifying novel biocontrol agents from New Zealand kiwifruit orchards. Doctoral thesis, University of East Anglia.

McDonald, Hannah (2022) Investigating the biosynthesis and mode of action of the formicamycin antibiotics. Doctoral thesis, University of East Anglia.

Mills, Lauren (2022) Development of Synechococcus sp. PCC 11901 as a biotechnology platform. Doctoral thesis, University of East Anglia.

Montemayor Lara, Aura (2022) The effect of gw2 mutant alleles on grain weight and size in bread wheat. Doctoral thesis, University of East Anglia.

O'Reilly, Enya (2022) Improving and extending the use of biodiversity indicators. Doctoral thesis, University of East Anglia.

Osborne, Peter (2022) The Intestinal Microbiota of two Arid-adapted rodents. Doctoral thesis, University of East Anglia.

Pawley-Benacerraf, George (2022) Investigating Bacterial Competition in the Leafcutter Ant Microbiome. Masters thesis, University of East Anglia.

Pfalzgraf, Hans (2022) Towards the structure-informed engineering of enzymes in the avenacin biosynthesis pathway. Doctoral thesis, University of East Anglia.

Poletti, Martina (2022) Investigating bifidobacteria-host interactions in the gut using organoid models and network biology approaches. Doctoral thesis, University of East Anglia.

Pye, Hannah (2022) Investigation of the molecular basis of variation in food chain related stress response of Salmonella enterica. Doctoral thesis, University of East Anglia.

Quiroz Chavez, Jesus (2022) Wheat haplotype diversity by a k-mer based approach. Doctoral thesis, University of East Anglia.

Render, Jasmine (2022) Investigating the effects of varying levels of EB2 expression on migration in cancer cells. Masters thesis, University of East Anglia.

Reynolds, Connor (2022) Development of detection and tracking methods for characterizing Cardiac Progenitor Cell migration patterns in Gallus gallus. Masters thesis, University of East Anglia.

Richardson, Daniel (2022) Identification of barriers to gene flow between Antirrhinum species. Doctoral thesis, University of East Anglia.

Samota, Evanthia (2022) Exploring how technical and social advances can overcome the hurdles of reproducibility in the life sciences. Doctoral thesis, University of East Anglia.

Samwald, Sebastian (2022) Regulation of plasmodesmal receptor sorting and signalling by membrane scaffolds – the role of tetraspanins and flotillins. Doctoral thesis, University of East Anglia.

Scadden, Jacob (2022) New Antimicrobials to Target Gut Pathogens. Doctoral thesis, University of East Anglia.

Schatteman, Arne (2022) Development of tools for the study of enzymes in ammonia oxidising archaea. Doctoral thesis, University of East Anglia.

Shehata, Emad (2022) Interactions Between Dietary Anthocyanins and the Human Gut Microbiota. Doctoral thesis, University of East Anglia.

Smith, Perry (2022) The Role of MicroRNA-29 in Osteoarthritis. Doctoral thesis, University of East Anglia.

Sprigg, Colleen (2022) Effect of phytase supplementation on tissue inositol phosphate levels in broiler chickens. Doctoral thesis, University of East Anglia.

Sweet, Ryan (2022) Determining mode of action and optimum use of phytochemicals as food preservatives. Doctoral thesis, University of East Anglia.

Taylor, Maddison Paige (2022) Investigating the role of End-Binding Protein-2 in epithelial tissue architecture. Masters thesis, University of East Anglia.

Thursfield, Lucy (2022) Phenotypic variation in feeding by the cabbage stem flea beetle (Psylliodes chrysocephala) in white mustard (Sinapis alba), and investigation of its genetic basis. Doctoral thesis, University of East Anglia.

Vanacore, Giada (2022) Distribution, identity and fate of Fgf18-expressing cells in the adult mouse Subventricular zone. Masters thesis, University of East Anglia.

Weldon, Shannon (2022) Deconstructing Somites across the Cervical-Thoracic Boundary using Advanced Genomics Approaches. Doctoral thesis, University of East Anglia.

Williams, Adam Thomas (2022) DMSP Cycling in Terrestrial Plant Environments. Masters thesis, University of East Anglia.

Yermekbayev, Kanat (2022) Understanding the genetic control of adaptation and yield for Kazakh bread wheat. Doctoral thesis, University of East Anglia.

Yiasoumi, Georgia (2022) Circadian regulation of photosynthetic efficiency under fluctuating environmental conditions. Masters thesis, University of East Anglia.

Zafeiriou, Petros (2022) A forward genetic approach to identify new loci controlling wheat starch digestibility. Doctoral thesis, University of East Anglia.

Zheng, Yixi (2022) The interactions between ocean, ice shelves and sea ice in the southeastern Amundsen Sea. Doctoral thesis, University of East Anglia.