Items where Author is "Jones, Jonathan"

Gladieux, Pierre, van Oosterhout, Cock ORCID: https://orcid.org/0000-0002-5653-738X, Fairhead, Sebastian, Jouet, Agathe, Ortiz, Diana, Ravel, Sebastien, Shrestha, Ram-Krishna, Frouin, Julien, He, Xiahong, Zhu, Youyong, Morel, Jean-Benoit, Huang, Huichuan, Kroj, Thomas and Jones, Jonathan D. G. (2024) Extensive immune receptor repertoire diversity in disease-resistant rice landraces. Current Biology, 34 (17). 3983-3995.e6. ISSN 0960-9822

Liu, Chen, Hatzianestis, Ioannis H., Pfirrmann, Thorsten, Reza, Salim H., Minina, Elena A., Moazzami, Ali, Stael, Simon, Gutierrez–Beltran, Emilio, Pitsili, Eugenia, Dörmann, Peter, D’Andrea, Sabine, Gevaert, Kris, Romero–Campero, Francisco, Ding, Pingtao, Nowack, Moritz K., Van Breusegem, Frank, Jones, Jonathan D. G., Bozhkov, Peter V. and Moschou, Panagiotis N. (2024) Seed longevity is controlled by metacaspases. Nature Communications, 15 (1). ISSN 2041-1723

Kim, Dae Sung, Li, Yufei, Ahn, Hee-Kyung ORCID: https://orcid.org/0000-0002-8884-0156, Woods-Tör, Alison, Cevik, Volkan, Furzer, Oliver J., Ma, Wenbo, Tör, Mahmut and Jones, Jonathan D. G. (2024) ATR2Cala2 from Arabidopsis-infecting downy mildew requires 4 TIR-NLR immune receptors for full recognition. New Phytologist, 243 (1). pp. 330-344. ISSN 0028-646X

Jones, Jonathan D. G., Staskawicz, Brian J. and Dangl, Jeffery L. (2024) The plant immune system: From discovery to deployment. Cell, 187 (9). pp. 2095-2116. ISSN 0092-8674

Lee, Eun Song, Heo, Jung, Bang, Woo Young, Chougule, Kapeel M., Waminal, Nomar Espinosa, Hong, Nguyen Thi, Kim, Min Ji, Beak, Hong Kwan, Kim, Yong Jun, Priatama, Ryza A., Jang, Ji In, Cha, Kang Il, Son, Seung Han, Rajendran, Sujeevan, Choo, Young Kug, Bae, Jong Hyang, Kim, Chul Min, Lee, Young Koung, Bae, Sangsu, Jones, Jonathan D. G., Sohn, Kee Hoon, Lee, Jiyoung, Kim, Hyun Hee, Hong, Jong Chan, Ware, Doreen, Kim, Keunhwa and Park, Soon Ju (2023) Engineering homoeologs provide a fine scale for quantitative traits in polyploid. Plant Biotechnology Journal, 21 (12). pp. 2458-2472. ISSN 1467-7644

Wang, Ming Yu, Chen, Jun Bin, Wu, Rui, Guo, Hai Long, Chen, Yan, Li, Zhen Ju, Wei, Lu Yang, Liu, Chuang, He, Sheng Feng, Du, Mei Da, Guo, Ya long, Peng, You Liang, Jones, Jonathan D. G., Weigel, Detlef, Huang, Jian-Hua and Zhu, Wang Sheng (2023) The plant immune receptor SNC1 monitors helper NLRs targeted by a bacterial effector. Cell Host and Microbe, 31 (11). 1792-1803.e7. ISSN 1931-3128

Asai, Shuta, Cevik, Volkan, Jones, Jonathan D. G. and Shirasu, Ken (2023) Cell-specific RNA profiling reveals host genes expressed in Arabidopsis cells haustoriated by downy mildew. Plant Physiology, 193 (1). pp. 259-270. ISSN 0032-0889

Lin, Xiao, Jia, Yuxin, Heal, Robert, Prokchorchik, Maxim, Sindalovskaya, Maria, Olave-Achury, Andrea, Makechemu, Moffat, Fairhead, Sebastian, Noureen, Azka, Heo, Jung, Witek, Kamil, Smoker, Matthew, Taylor, Jodie, Shrestha, Ram-Krishna, Lee, Yoonyoung, Zhang, Chunzhi, Park, Soon Ju, Sohn, Kee Hoon, Huang, Sanwen and Jones, Jonathan D. G. (2023) Solanum americanum genome-assisted discovery of immune receptors that detect potato late blight pathogen effectors. Nature Genetics, 55 (9). pp. 1579-1588. ISSN 1061-4036

Gu, Benguo, Parkes, Toby, Rabanal, Fernando, Smith, Caroline, Lu, Fu-Hao, McKenzie, Neil, Dong, Hui, Weigel, Detlef, Jones, Jonathan D. G., Cevik, Volkan and Bevan, Michael W. (2023) The integrated LIM-peptidase domain of the CSA1-CHS3/DAR4 paired immune receptor detects changes in DA1 peptidase inhibitors in Arabidopsis. Cell Host & Microbe, 31 (6). 949-961.e5. ISSN 1931-3128

Yu, Guotai, Matny, Oadi, Gourdoupis, Spyridon, Rayapuram, Naganand, Aljedaani, Fatimah R., Wang, Yan L., Nürnberger, Thorsten, Johnson, Ryan, Crean, Emma E., Saur, Isabel M.-L., Gardener, Catherine, Yue, Yajuan, Kangara, Ngonidzashe, Steuernagel, Burkhard, Hayta, Sadiye, Smedley, Mark, Harwood, Wendy, Patpour, Mehran, Wu, Shuangye, Poland, Jesse, Jones, Jonathan D.G., Reuber, T. Lynne, Ronen, Moshe, Sharon, Amir, Rouse, Matthew N., Xu, Steven, Holušová, Kateřina, Bartoš, Jan, Molnár, István, Karafiátová, Miroslava, Hirt, Heribert, Blilou, Ikram, Jaremko, Łukasz, Doležel, Jaroslav, Steffenson, Brian J. and Wulff, Brande B.H. (2023) The wheat stem rust resistance gene Sr43 encodes an unusual protein kinase. Nature Genetics, 55 (6). pp. 921-926. ISSN 1061-4036

Larson, Emily R., Armstrong, Emily May, Harper, Helen, Knapp, Sandra, Edwards, Keith J., Grierson, Don, Poppy, Guy, Chase, Mark W., Jones, Jonathan D. G., Bastow, Ruth, Jellis, Graham, Barnes, Steve, Temple, Paul, Clarke, Matthew, Oldroyd, Giles and Grierson, Claire S. (2023) One hundred important questions for plant science – reflecting on a decade of plant research. New Phytologist, 238 (2). pp. 464-469. ISSN 0028-646X

Ahn, Hee-Kyung ORCID: https://orcid.org/0000-0002-8884-0156, Lin, Xiao, Olave-Achury, Andrea Carolina, Derevnina, Lida, Contreras, Mauricio P., Kourelis, Jiorgos ORCID: https://orcid.org/0000-0002-9007-1333, Wu, Chih-Hang, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Jones, Jonathan D. G. (2023) Effector-dependent activation and oligomerization of plant NRC class helper NLRs by sensor NLR immune receptors Rpi-amr3 and Rpi-amr1. EMBO Journal, 42 (5). ISSN 0261-4189

Arora, Sanu, Steed, Andrew, Goddard, Rachel, Gaurav, Kumar, O’Hara, Tom, Schoen, Adam, Rawat, Nidhi, Elkot, Ahmed F., Korolev, Andrey V., Chinoy, Catherine, Nicholson, Martha H., Asuke, Soichiro, Antoniou-Kourounioti, Rea, Steuernagel, Burkhard, Yu, Guotai, Awal, Rajani, Forner-Martínez, Macarena, Wingen, Luzie, Baggs, Erin, Clarke, Jonathan, Saunders, Diane G.O., Krasileva, Ksenia V., Tosa, Yukio, Jones, Jonathan D.G., Tiwari, Vijay K., Wulff, Brande B.H. and Nicholson, Paul (2023) A wheat kinase and immune receptor form host-specificity barriers against the blast fungus. Nature Plants, 9 (3). pp. 385-392. ISSN 2055-026X

Hulin, Michelle T., Hill, Lionel, Jones, Jonathan D. G. and Ma, Wenbo (2023) Pangenomic analysis reveals plant NAD+ manipulation as an important virulence activity of bacterial pathogen effectors. Proceedings of the National Academy of Sciences of the United States of America, 120 (7). ISSN 0027-8424

Redkar, Amey, Cevik, Volkan, Bailey, Kate, Zhao, He, Kim, Dae Sung, Zou, Zhou, Furzer, Oliver J., Fairhead, Sebastian, Borhan, M. Hossein, Holub, Eric B. and Jones, Jonathan D.G. (2023) The Arabidopsis WRR4A and WRR4B paralogous NLR proteins both confer recognition of multiple Albugo candida effectors. New Phytologist, 237 (2). pp. 532-547. ISSN 0028-646X

Ngou, Bruno Pok Man, Heal, Robert, Wyler, Michele, Schmid, Marc W. and Jones, Jonathan D. G. (2022) Concerted expansion and contraction of immune receptor gene repertoires in plant genomes. Nature Plants, 8 (10). pp. 1146-1152. ISSN 2055-026X

Rhodes, Jack, Zipfel, Cyril, Jones, Jonathan D.G. and Ngou, Bruno Pok Man (2022) Concerted actions of PRR- and NLR-mediated immunity. Essays in Biochemistry, 66 (5). pp. 501-511. ISSN 0071-1365

Lin, Xiao, Olave-Achury, Andrea, Heal, Robert, Pais, Marina, Witek, Kamil, Ahn, Hee-Kyung ORCID: https://orcid.org/0000-0002-8884-0156, Zhao, He, Bhanvadia, Shivani, Karki, Hari S., Song, Tianqiao, Wu, Chih-Hang, Adachi, Hiroaki, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Vleeshouwers, Vivianne G. A. A. and Jones, Jonathan D. G. (2022) A potato late blight resistance gene protects against multiple Phytophthora species by recognizing a broadly conserved RXLR-WY effector. Molecular Plant, 15 (9). pp. 1457-1469. ISSN 1752-9867

Grech-Baran, Marta, Witek, Kamil, Poznański, Jarosław T., Grupa-Urbańska, Anna, Malinowski, Tadeusz, Lichocka, Małgorzata, Jones, Jonathan D.G. and Hennig, Jacek (2022) The Rysto immune receptor recognises a broadly conserved feature of potyviral coat proteins. New Phytologist, 235 (3). pp. 1179-1195. ISSN 0028-646X

Ngou, Bruno Pok Man, Ding, Pingtao and Jones, Jonathan D. G. (2022) Thirty years of resistance: Zig-zag through the plant immune system. The Plant Cell, 34 (5). 1447–1478. ISSN 1040-4651

Yu, Guotai, Matny, Oadi, Champouret, Nicolas, Steuernagel, Burkhard, Moscou, Matthew J. ORCID: https://orcid.org/0000-0003-2098-6818, Hernández-Pinzón, Inmaculada, Green, Phon, Hayta, Sadiye, Smedley, Mark, Harwood, Wendy, Kangara, Ngonidzashe, Yue, Yajuan, Gardener, Catherine, Banfield, Mark J., Olivera, Pablo D., Welchin, Cole, Simmons, Jamie, Millet, Eitan, Minz-Dub, Anna, Ronen, Moshe, Avni, Raz, Sharon, Amir, Patpour, Mehran, Justesen, Annemarie F., Jayakodi, Murukarthick, Himmelbach, Axel, Stein, Nils, Wu, Shuangye, Poland, Jesse, Ens, Jennifer, Pozniak, Curtis, Karafiátová, Miroslava, Molnár, István, Doležel, Jaroslav, Ward, Eric R., Reuber, T. Lynne, Jones, Jonathan D. G., Mascher, Martin, Steffenson, Brian J. and Wulff, Brande B. H. (2022) Aegilops sharonensis genome-assisted identification of stem rust resistance gene Sr62. Nature Communications, 13 (1). ISSN 2041-1723

Ngou, Bruno Pok Man, Jones, Jonathan D. G. and Ding, Pingtao (2022) Plant immune networks. Trends in Plant Science, 27 (3). pp. 255-273. ISSN 1360-1385

Furzer, Oliver J., Cevik, Volkan, Fairhead, Sebastian, Bailey, Kate, Redkar, Amey, Schudoma, Christian, MacLean, Dan, Holub, Eric B. and Jones, Jonathan D. G. (2022) An improved assembly of the Albugo candida Ac2V genome reveals the expansion of the "CCG" class of effectors. Molecular plant-microbe interactions : MPMI, 35 (1). pp. 39-48. ISSN 0894-0282

Mukhi, Nitika, Brown, Hannah, Gorenkin, Danylo, Ding, Pingtao, Bentham, Adam R., Stevenson, Clare E. M., Jones, Jonathan D. G. and Banfield, Mark J. (2021) Perception of structurally distinct effectors by the integrated WRKY domain of a plant immune receptor. Proceedings of the National Academy of Sciences, 118 (50). ISSN 0027-8424

Ding, Pingtao, Sakai, Toshiyuki, Shrestha, Ram Krishna, Perez, Nicolas Manosalva, Guo, Wenbin, Ngou, Bruno Pok Man, He, Shengbo, Liu, Chang, Feng, Xiaoqi, Zhang, Runxuan, Vandepoele, Klaas, MacLean, Dan and Jones, Jonathan D. G. (2021) Chromatin accessibility landscapes activated by cell-surface and intracellular immune receptors. Journal of Experimental Botany, 72 (22). 7927–7941. ISSN 0022-0957

Wang, Haixia, Trusch, Franziska, Turnbull, Dionne, Aguilera-Galvez, Carolina, Breen, Susan, Naqvi, Shaista, Jones, Jonathan D. G., Hein, Ingo, Tian, Zhendong, Vleeshouwers, Vivianne, Gilroy, Eleanor and Birch, Paul R. J. (2021) Evolutionarily distinct resistance proteins detect a pathogen effector through its association with different host targets. New Phytologist, 232 (3). pp. 1368-1381. ISSN 0028-646X

Castel, Baptiste, Fairhead, Sebastian, Furzer, Oliver J., Redkar, Amey, Wang, Shanshan, Cevik, Volkan, Holub, Eric B. and Jones, Jonathan D. G. (2021) Evolutionary trade-offs at the Arabidopsis WRR4A resistance locus underpin alternate Albugo candida race recognition specificities. The Plant Journal, 107 (5). pp. 1490-1502. ISSN 0960-7412

Jones, Jonathan D.G. and Dangl, Jeffery L. (2021) Editorial overview:An embarrassment of riches. Current Opinion in Plant Biology, 62. ISSN 1369-5266

Ngou, Bruno Pok Man, Ding, Pingtao and Jones, Jonathan D.G. (2021) Channeling plant immunity. Cell, 184 (13). pp. 3358-3360. ISSN 0092-8674

Sun, Xinhua, Lapin, Dmitry, Feehan, Joanna, Stolze, Sara C., Kramer, Katharina, Dongus, Joram A., Rzemieniewski, Jakub, Blanvillain-Baufumé, Servane, Harzen, Anne, Bautor, Jaqueline, Derbyshire, Paul, Menke, Frank ORCID: https://orcid.org/0000-0003-2490-4824, Finkemeier, Iris, Nakagami, Hirofumi, Jones, Jonathan D. G. and Parker, Jane E. (2021) Pathogen effector recognition-dependent association of NRG1 with EDS1 and SAG101 in TNL receptor immunity. Nature Communications, 12. ISSN 2041-1723

Ngou, Pok Man, Ahn, Hee Kyung ORCID: https://orcid.org/0000-0002-8884-0156, Ding, Pingtao and Jones, Jonathan D. J. (2021) Mutual potentiation of plant immunity by cell-surface and intracellular receptors. Nature, 592 (7852). 110–115. ISSN 0028-0836

Guo, Hailong, Wang, Shanshan and Jones, Jonathan D G (2021) Autoactive Arabidopsis RPS4 alleles require partner protein RRS1-R. Plant Physiology, 185 (3). pp. 761-764. ISSN 0032-0889

Moon, Hayoung, Pandey, Ankita, Yoon, Hayeon, Choi, Sera, Jeon, Hyelim, Prokchorchik, Maxim, Jung, Gayoung, Witek, Kamil, Valls, Marc, McCann, Honour C., Kim, Min‐Sung, Jones, Jonathan D. G., Segonzac, Cécile and Sohn, Kee Hoon (2021) Identification of RipAZ1 as an avirulence determinant of Ralstonia solanacearum in Solanum americanum. Molecular Plant Pathology, 22 (3). pp. 317-333. ISSN 1464-6722

Witek, Kamil, Lin, Xiao, Karki, Hari S., Jupe, Florian, Witek, Agnieszka I., Steuernagel, Burkhard, Stam, Remco, Van Oosterhout, Cock ORCID: https://orcid.org/0000-0002-5653-738X, Fairhead, Sebastian, Heal, Robert, Cocker, Jonathan M., Bhanvadia, Shivani, Barrett, William, Wu, Chih-Hang, Adachi, Hiroaki, Song, Tianqiao, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Vleeshouwers, Vivianne G. A. A., Tomlinson, Laurence, Wulff, Brande B. H. and Jones, Jonathan D. G. (2021) A complex resistance locus in Solanum americanum recognizes a conserved Phytophthora effector. Nature Plants, 7 (2). pp. 198-208. ISSN 2055-026X

Torti, Stefano, Schlesier, René, Thümmler, Anka, Bartels, Doreen, Römer, Patrick, Koch, Birgit, Werner, Stefan, Panwar, Vinay, Kanyuka, Kostya, von Wirén, Nicolaus, Jones, Jonathan D. G., Hause, Gerd, Giritch, Anatoli and Gleba, Yuri (2021) Transient reprogramming of crop plants for agronomic performance. Nature Plants, 7 (2). pp. 159-171. ISSN 2055-026X

Lin, Xiao, Song, Tianqiao, Fairhead, Sebastian, Witek, Kamil, Jouet, Agathe, Jupe, Florian, Witek, Agnieszka I., Karki, Hari S., Vleeshouwers, Vivianne G. A. A., Hein, Ingo and Jones, Jonathan D. G. (2020) Identification of Avramr1 from Phytophthora infestans using long read and cDNA pathogen‐enrichment sequencing (PenSeq). Molecular Plant Pathology, 21 (11). pp. 1502-1512. ISSN 1464-6722

Lin, Xiao and Jones, Jonathan D. G. (2020) RNA splicing: A novel pathogen effector target. Molecular Plant, 13 (10). p. 1348. ISSN 1752-9867

Duxbury, Zane, Wang, Shanshan, MacKenzie, Craig I., Tenthorey, Jeannette L., Zhang, Xiaoxiao, Huh, Sung Un, Hu, Lanxi, Hill, Lionel, Ngou, Pok Man, Ding, Pingtao, Chen, Jian, Ma, Yan, Guo, Hailong, Castel, Baptiste, Moschou, Panagiotis N., Bernoux, Maud, Dodds, Peter N., Vance, Russell E. and Jones, Jonathan D. G. (2020) Induced proximity of a TIR signaling domain on a plant-mammalian NLR chimera activates defense in plants. Proceedings of the National Academy of Sciences of the United States of America, 117 (31). pp. 18832-18839. ISSN 1091-6490

Feehan, Joanna M., Castel, Baptiste, Brentham, Adam R. and Jones, Jonathan D. G. (2020) Plant NLRs get by with a little help from their friends. Plant Biology, 56. pp. 99-108. ISSN 1435-8603

Ding, Pingtao, Ngou, Bruno Pok Man, Furzer, Oliver J., Sakai, Toshiyuki, Shrestha, Ram Krishna, MacLean, Dan and Jones, Jonathan D. G. (2020) High-resolution expression profiling of selected gene sets during plant immune activation. Plant Biotechnology Journal, 18 (7). pp. 1610-1619. ISSN 1467-7644

Jones, Jonathan and Wulff, Brande (2020) Breeding a fungal gene into wheat. Science, 368 (6493). pp. 822-823. ISSN 0036-8075

Guo, Hailong, Ahn, Hee-kyung ORCID: https://orcid.org/0000-0002-8884-0156, Sklenar, Jan, Huang, Jianhua, Ma, Yan, Ding, Pingtao, Menke, Frank L.h. ORCID: https://orcid.org/0000-0003-2490-4824 and Jones, Jonathan D. G. (2020) Phosphorylation-regulated activation of the Arabidopsis RRS1-R/RPS4 immune receptor complex reveals two distinct effector recognition mechanisms. Cell Host & Microbe, 27 (5). 769-781.e6. ISSN 1931-3128

Ngou, Bruno Pok Man, Ahn, Hee-Kyung ORCID: https://orcid.org/0000-0002-8884-0156, Ding, Pingtao, Redkar, Amey, Brown, Hannah, Ma, Yan, Youles, Mark, Tomlinson, Laurence and Jones, Jonathan D. G. (2020) Estradiol-inducible AvrRps4 expression reveals distinct properties of TIR-NLR-mediated effector-triggered immunity. Journal of Experimental Botany, 71 (6). pp. 2186-2197. ISSN 0022-0957

Grech-Baran, Marta, Witek, Kamil, Szajko, Katarzyna, Witek, Agnieszka I, Morgiewicz, Karolina, Wasilewicz-Flis, Iwona, Jakuczun, Henryka, Marczewski, Waldemar, Jones, Jonathan D G and Hennig, Jacek (2020) Extreme resistance to Potato virus Y in potato carrying the Rysto gene is mediated by a TIR-NLR immune receptor. Plant Biotechnology Journal, 18 (3). pp. 655-667. ISSN 1467-7644

Andolfo, Giuseppe, Di Donato, Antimo, Chiaiese, Pasquale, De Natale, Antonino, Pollio, Antonino, Jones, Jonathan D G, Frusciante, Luigi and Ercolano, Maria Raffaella (2019) Alien domains shaped the modular structure of plant NLR proteins. Genome Biology and Evolution, 11 (12). pp. 3466-3477. ISSN 1759-6653

Jones, Jonathan D.G. (2019) The curious case of the bacterial engineer. Nature Plants, 5 (9). pp. 906-907. ISSN 2055-026X

van de Weyer, Anna-Lena, Monteiro, Freddy, Furzer, Oliver J., Nishimura, Marc T., Cevik, Volkan, Witek, Kamil, Jones, Jonathan D. G., Dangl, Jeffery L., Weigel, Detlef and Bemm, Felix (2019) A species-wide inventory of NLR genes and alleles in Arabidopsis thaliana. Cell, 178 (5). 1260-1272.e14. ISSN 0092-8674

Dangl, Jeffery L. and Jones, Jonathan (2019) A pentangular plant inflammasome. Science, 364 (6435). pp. 31-32. ISSN 0036-8075

Castel, Baptiste, Ngou, Pok-Man, Cevik, Volkan, Redkar, Amey, Kim, Dae-Sung, Yang, Ying, Ding, Pingtao and Jones, Jonathan D G (2019) Diverse NLR immune receptors activate defence via the RPW8-NLR NRG1. New Phytologist, 222 (2). pp. 966-980. ISSN 0028-646X

Newman, Toby E., Lee, Jungmin, Williams, Simon J., Choi, Sera, Halane, Morgan K., Zhou, Jun, Solomon, Peter, Kobe, Bostjan, Jones, Jonathan D.G., Segonzac, Cécile and Sohn, Kee Hoon (2019) Autoimmunity and effector recognition in Arabidopsis thaliana can be uncoupled by mutations in the RRS1‐R immune receptor. New Phytologist, 222 (2). pp. 954-965. ISSN 0028-646X

Cevik, Volkan, Boutrot, Freddy, Apel, Wiebke, Robert-Seilaniantz, Alexandre, Furzer, Oliver J., Redkar, Amey, Castel, Baptiste, Kover, Paula X., Prince, David C., Holub, Eric B. and Jones, Jonathan D.G. (2019) Transgressive segregation reveals mechanisms of Arabidopsis immunity to Brassica-infecting races of white rust (Albugo candida). Proceedings of the National Academy of Sciences of the United States of America, 116 (7). pp. 2767-2773. ISSN 0027-8424

Jouet, Agathe, Saunders, Diane G. O., McMullan, Mark, Ward, Ben, Furzer, Oliver, Jupe, Florian, Cevik, Volkan, Hein, Ingo, Thilliez, Gaetan J. A., Holub, Eric, van Oosterhout, Cock ORCID: https://orcid.org/0000-0002-5653-738X and Jones, Jonathan D. G. (2019) Albugo candida race diversity, ploidy and host‐associated microbes revealed using DNA sequence capture on diseased plants in the field. New Phytologist, 221 (3). pp. 1529-1543. ISSN 0028-646X

Thilliez, Gaetan J. A., Armstrong, Miles R., Lim, Tze-Yin, Baker, Katie, Jouet, Agathe, Ward, Ben, Van Oosterhout, Cock ORCID: https://orcid.org/0000-0002-5653-738X, Jones, Jonathan D. G., Huitema, Edgar, Birch, Paul R. J. and Hein, Ingo (2019) Pathogen enrichment sequencing (PenSeq) enables population genomic studies in oomycetes. New Phytologist, 221 (3). pp. 1634-1648. ISSN 0028-646X

Tomlinson, Laurence, Yang, Ying, Emenecker, Ryan, Smoker, Matthew, Taylor, Jodie, Perkins, Sara, Smith, Justine, MacLean, Dan, Olszewski, Neil E. and Jones, Jonathan D. G. (2019) Using CRISPR/Cas9 genome editing in tomato to create a gibberellin-responsive dominant dwarf DELLA allele. Plant Biotechnology Journal, 17 (1). pp. 132-140. ISSN 1467-7644

Ma, Yan, Guo, Hailong, Hu, Lanxi, Martinez, Paula Pons, Moschou, Panagiotis N., Cevik, Volkan, Ding, Pingtao, Duxbury, Zane, Sarris, Panagiotis F. and Jones, Jonathan D. G. (2018) Distinct modes of derepression of an Arabidopsis immune receptor complex by two different bacterial effectors. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 115 (41). pp. 10218-10227. ISSN 0027-8424

Giolai, Michael, Paajanen, Pirita, Verweij, Walter, Witek, Kamil, Jones, Jonathan D. G. and Clark, Matthew D. (2017) Comparative analysis of targeted long read sequencing approaches for characterization of a plant’s immune receptor repertoire. BMC Genomics, 18. ISSN 1471-2164

Michelmore, Richard, Coaker, Gitta, Bart, Rebecca, Beattie, Gwyn, Bent, Andrew, Bruce, Toby, Cameron, Duncan, Dangl, Jeffery, Dinesh-Kumar, Savithramma, Edwards, Rob, Eves-van Den Akker, Sebastian, Gassmann, Walter, Greenberg, Jean T., Hanley-Bowdoin, Linda, Harrison, Richard J., Harvey, Jagger, He, Ping, Huffaker, Alisa, Hulbert, Scot, Innes, Roger, Jones, Jonathan D. G., Kaloshian, Isgouhi, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Katagiri, Fumiaki, Leach, Jan, Ma, Wenbo, McDowell, John, Medford, June, Meyers, Blake, Nelson, Rebecca, Oliver, Richard, Qi, Yiping, Saunders, Diane, Shaw, Michael, Smart, Christine, Subudhi, Prasanta, Torrance, Lesley, Tyler, Bret, Valent, Barbara and Walsh, John (2017) Foundational and translational research opportunities to improve plant health. Molecular Plant-Microbe Interactions, 30 (7). pp. 515-516. ISSN 0894-0282

Yu, Guotai, Champouret, Nicolas, Steuernagel, Burkhard, Olivera, Pablo D., Simmons, Jamie, Williams, Cole, Johnson, Ryan, Moscou, Matthew J. ORCID: https://orcid.org/0000-0003-2098-6818, Hernández-Pinzón, Inmaculada, Green, Phon, Sela, Hanan, Millet, Eitan, Jones, Jonathan D. G., Ward, Eric R., Steffenson, Brian J. and Wulff, Brande B. H. (2017) Discovery and characterization of two new stem rust resistance genes in Aegilops sharonensis. Theoretical and Applied Genetics, 130 (6). 1207–1222. ISSN 0040-5752

Huh, Sung Un, Cevik, Volkan, Ding, Pingtao, Duxbury, Zane, Ma, Yan, Sarris, Panagiotis F. and Jones, Jonathan (2017) Protein-protein interactions in the RPS4/RRS1 immune receptor complex. PLoS Pathogens, 13 (5). ISSN 1553-7374

Prince, David C., Rallapalli, Ghanasyam, Xu, Deyang, Schoonbeek, Henk-jan, Çevik, Volkan, Asai, Shuta, Kemen, Eric, Cruz-Mireles, Neftaly, Kemen, Ariane, Belhaj, Khaoula, Schornack, Sebastian, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Holub, Eric B., Halkier, Barbara A. and Jones, Jonathan D. G. (2017) Albugo-imposed changes to tryptophan-derived antimicrobial metabolite biosynthesis may contribute to suppression of non-host resistance to Phytophthora infestans in Arabidopsis thaliana. BMC Biology, 15. ISSN 1741-7007

Belhaj, Khaoula, Cano, Liliana M, Prince, David C, Kemen, Ariane, Yoshida, Kentaro, Dagdas, Yasin F, Etherington, Graham J, Schoonbeek, Henk-Jan, van Esse, H Peter, Jones, Jonathan D G, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Schornack, Sebastian (2017) Arabidopsis late blight:Infection of a nonhost plant by Albugo laibachii enables full colonization by Phytophthora infestans. Cellular Microbiology, 19 (1). ISSN 1462-5814

Jones, Jonathan, Vance, Russell E. and Dangl, Jeffery L. (2016) Intracellular innate immune surveillance devices in plants and animals. Science, 354 (6316). ISSN 0036-8075

Duxbury, Zane, Ma, Yan, Furzer, Oliver, Huh, Sung Un, Cevik, Volkan, Jones, Jonathan and Sarris, Panagiotis (2016) Pathogen perception by NLRs in plants and animals: Parallel worlds. BioEssays, 38 (8). pp. 769-781. ISSN 0265-9247

Kawashima, Cintia G., Augusto Guimaraes, Gustavo, Regina Nogueira, Sonia, Maclean, Dan, Cook, Doug R., Steuernagel, Burkhard, Baek, Jongmin, Bouyioukos, Costas, do V A Melo, Bernardo, Tristao, Gustavo, Camargos de Oliveira, Jamile, Rauscher, Gilda, Mittal, Shipra, Panichelli, Lisa, Bacot, Karen, Johnson, Ebony, Iyer, Geeta, Tabor, Girma, Wulff, Brande B. H., Ward, Eric, Rairdan, Gregory J., Broglie, Karen E., Wu, Gusui, Van Esse, H. Peter, Jones, Jonathan D. G. and Brommonschenkel, Sergio H. (2016) A pigeonpea gene confers resistance to Asian soybean rust in soybean. Nature Biotechnology, 34 (6). 661–665. ISSN 1087-0156

Steuernagel, Burkhard, Periyannan, Sambasivam K., Hernandez-Pinzon, Inmaculada, Witek, Kamil, Rouse, Matthew N., Yu, Guotai, Hatta, Asyraf, Ayliffe, Mick, Bariana, Harbans, Jones, Jonathan D. G., Lagudah, Evans S. and Wulff, Brande (2016) Rapid cloning of disease-resistance genes in plants using mutagenesis and sequence capture. Nature Biotechnology, 34 (6). 652–655. ISSN 1087-0156

Witek, Kamil, Jupe, Florian, Witek, Agnieszka, Baker, David, Clark, Matthew D. and Jones, Jonathan D. G. (2016) Accelerated cloning of a potato late blight–resistance gene using RenSeq and SMRT sequencing. Nature Biotechnology, 34 (6). 656–660. ISSN 1087-0156

Sarris, Panagiotis, Cevik, Volkan, Dagdas, Gulay, Jones, Jonathan and Krasileva, Ksenia (2016) Comparative analysis of plant immune receptor architectures uncovers host proteins likely targeted by pathogens. BMC Biology, 14. ISSN 1741-7007

Patron, Nicola J., Orzaez, Diego, Marillonnet, Sylvestre, Warzecha, Heribert, Matthewman, Colette, Youles, Mark, Raitskin, Oleg, Leveau, Aymeric, Farré, Gemma, Rogers, Christian, Smith, Alison, Hibberd, Julian, Webb, Alex A. R., Locke, James, Schornack, Sebastian, Ajioka, Jim, Baulcombe, David C., Zipfel, Cyril, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Jones, Jonathan D. G., Kuhn, Hannah, Robatzek, Silke, Van Esse, H. Peter, Sanders, Dale, Oldroyd, Giles, Martin, Cathie, Field, Rob ORCID: https://orcid.org/0000-0001-8574-0275, O'Connor, Sarah, Fox, Samantha, Wulff, Brande, Miller, Ben ORCID: https://orcid.org/0000-0003-0882-033X, Breakspear, Andy, Radhakrishnan, Guru, Delaux, Pierre-Marc, Loqué, Dominique, Granell, Antonio, Tissier, Alain, Shih, Patrick, Brutnell, Thomas P., Quick, W. Paul, Rischer, Heiko, Fraser, Paul D., Aharoni, Asaph, Raines, Christine, South, Paul F., Ané, Jean-Michel, Hamberger, Björn R., Langdale, Jane, Stougaard, Jens, Bouwmeester, Harro, Udvardi, Michael, Murray, James A. H., Ntoukakis, Vardis, Schäfer, Patrick, Denby, Katherine, Edwards, Keith J., Osbourn, Anne and Haseloff, Jim (2015) Standards for plant synthetic biology: A common syntax for exchange of DNA parts. New Phytologist, 208 (1). pp. 13-19. ISSN 0028-646X

Sarris, Panagiotis F., Duxbury, Zane, Huh, Sung Un, Ma, Yan, Segonzac, Cécile, Sklenar, Jan, Derbyshire, Paul, Cevik, Volkan, Rallapalli, Ghanasyam, Saucet, Simon B., Wirthmueller, Lennart, Menke, Frank L. H. ORCID: https://orcid.org/0000-0003-2490-4824, Sohn, Kee Hoon and Jones, Jonathan D. G. (2015) A plant immune receptor detects pathogen effectors that target WRKY transcription factors. Cell, 161 (5). pp. 1089-1100. ISSN 0092-8674

Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Furzer, Oliver, Jones, Jonathan D. G., Judelson, Howard S., Ali, Gul Shad, Dalio, Ronaldo J. D., Roy, Sanjoy Guha, Schena, Leonardo, Zambounis, Antonios, Panabières, Franck, Cahill, David, Ruocco, Michelina, Figueiredo, Andreia, Chen, Xiao-ren, Hulvey, Jon, Stam, Remco, Lamour, Kurt, Gijzen, Mark, Tyler, Brett M., Grünwald, Niklaus J., Mukhtar, M. Shahid, Tomé, Daniel F. A., Tör, Mahmut, Van Den Ackerveken, Guido, Mcdowell, John, Daayf, Fouad, Fry, William E., Lindqvist-kreuze, Hannele, Meijer, Harold J. G., Petre, Benjamin, Ristaino, Jean, Yoshida, Kentaro, Birch, Paul R. J. and Govers, Francine (2015) The Top 10 oomycete pathogens in molecular plant pathology:Top 10 oomycete plant pathogens. Molecular Plant Pathology, 16 (4). pp. 413-434. ISSN 1464-6722

McMullan, Mark, Gardiner, Anastasia, Bailey, Kate, Kemen, Eric, Ward, Ben J., Cevik, Volkan, Robert-Seilaniantz, Alexandre, Schultz-Larsen, Torsten, Balmuth, Alexi, Holub, Eric, van Oosterhout, Cock ORCID: https://orcid.org/0000-0002-5653-738X and Jones, Jonathan D. G. (2015) Evidence for suppression of immunity as a driver for genomic introgressions and host range expansion in races of Albugo candida, a generalist parasite. eLife, 4. ISSN 2050-084X

Wirthmueller, Lennart, Roth, Charlotte, Fabro, Georgina, Caillaud, Marie-Cécile, Rallapalli, Ghanasyam, Asai, Shuta, Sklenar, Jan, Jones, Alexandra M. E., Wiermer, Marcel, Jones, Jonathan D. G. and Banfield, Mark J. (2015) Probing formation of cargo/importin-α transport complexes in plant cells using a pathogen effector. The Plant Journal, 81 (1). pp. 40-52. ISSN 0960-7412

Sohn, Kee Hoon, Segonzac, Cécile, Rallapalli, Ghanasyam, Sarris, Panagiotis F., Woo, Joo Yong, Williams, Simon J., Newman, Toby E., Paek, Kyung Hee, Kobe, Bostjan and Jones, Jonathan D. G. (2014) The nuclear immune receptor RPS4 is required for RRS1SLH1-dependent constitutive defense activation in Arabidopsis thaliana. PLoS Genetics, 10 (10). ISSN 1553-7390

Asai, Shuta, Rallapalli, Ghanasyam, Piquerez, Sophie J M, Caillaud, Marie-Cécile, Furzer, Oliver J, Ishaque, Naveed, Wirthmueller, Lennart, Fabro, Georgina, Shirasu, Ken and Jones, Jonathan D G (2014) Expression profiling during arabidopsis/downy mildew interaction reveals a highly-expressed effector that attenuates responses to salicylic acid. PLoS Pathogens, 10 (10). ISSN 1553-7374

Rallapalli, Ghanasyam, Kemen, Eric M, Robert-Seilaniantz, Alexandre, Segonzac, Cécile, Etherington, Graham J, Sohn, Kee Hoon, MacLean, Daniel and Jones, Jonathan D G (2014) EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics. BMC Genomics, 15. ISSN 1471-2164

Kadota, Yasuhiro, Sklenar, Jan, Derbyshire, Paul, Stransfeld, Lena, Asai, Shuta, Ntoukakis, Vardis, Jones, Jonathan Dg, Shirasu, Ken, Menke, Frank ORCID: https://orcid.org/0000-0003-2490-4824, Jones, Alexandra and Zipfel, Cyril (2014) Direct regulation of the NADPH oxidase RBOHD by the PRR-associated kinase BIK1 during plant immunity. Molecular Cell, 54 (1). pp. 43-55. ISSN 1097-2765

Williams, Simon J., Sohn, Kee Hoon, Wan, Li, Bernoux, Maud, Sarris, Panagiotis F., Segonzac, Cecile, Ve, Thomas, Ma, Yan, Saucet, Simon B., Ericsson, Daniel J., Casey, Lachlan W., Lonhienne, Thierry, Winzor, Donald J., Zhang, Xiaoxiao, Coerdt, Anne, Parker, Jane E., Dodds, Peter N., Kobe, Bostjan and Jones, Jonathan D. G. (2014) Structural basis for assembly and function of a heterodimeric plant immune receptor. Science, 344 (6181). pp. 299-303. ISSN 0036-8075

Jones, J. D. G., Witek, K., Verweij, W., Jupe, F., Cooke, David, Dorling, S., Tomlinson, L., Smoker, M., Perkins, S. and Foster, S. (2014) Elevating crop disease resistance with cloned genes. Philosophical Transactions of the Royal Society B: Biological Sciences, 369 (1639). ISSN 0962-8436

Caillaud, Marie-Cécile, Asai, Shuta, Rallapalli, Ghanasyam, Piquerez, Sophie, Fabro, Georgina and Jones, Jonathan D. G. (2013) A downy mildew effector attenuates salicylic acid–triggered immunity in Arabidopsis by interacting with the host mediator complex. PLoS Biology, 11 (12). ISSN 1545-7885

Jupe, Florian, Witek, Kamil, Verweij, Walter, Śliwka, Jadwiga, Pritchard, Leighton, Etherington, Graham J., Maclean, Dan, Cock, Peter J., Leggett, Richard M., Bryan, Glenn J., Cardle, Linda, Hein, Ingo and Jones, Jonathan D.g. (2013) Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations. The Plant Journal, 76 (3). pp. 530-544. ISSN 0960-7412

Badel, Jorge Luis, Piquerez, Sophie J M, Greenshields, David, Rallapalli, Ghanasyam, Fabro, Georgina, Ishaque, Naveed and Jones, Jonathan D G (2013) In planta effector competition assays detect Hyaloperonospora arabidopsidis effectors that contribute to virulence and localize to different plant subcellular compartments. Molecular Plant-Microbe Interactions, 26 (7). pp. 745-757. ISSN 0894-0282

Asai, Shuta, Ichikawa, Tatsushi, Nomura, Hironari, Kobayashi, Michie, Kamiyoshihara, Yusuke, Mori, Hitoshi, Kadota, Yasuhiro, Zipfel, Cyril, Jones, Jonathan D G and Yoshioka, Hirofumi (2013) The variable domain of a plant calcium-dependent protein kinase (CDPK) confers subcellular localization and substrate recognition for NADPH oxidase. The Journal of Biological Chemistry, 288 (20). pp. 14332-14340. ISSN 1083-351X

Sharma, Shailendra, Sharma, Shiveta, Hirabuchi, Akiko, Yoshida, Kentaro, Fujisaki, Koki, Ito, Akiko, Uemura, Aiko, Terauchi, Ryohei, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Sohn, Kee Hoon, Jones, Jonathan D. G. and Saitoh, Hiromasa (2013) Deployment of the Burkholderia glumae type III secretion system as an efficient tool for translocating pathogen effectors to monocot cells. The Plant Journal, 74 (4). pp. 701-712. ISSN 0960-7412

Leggett, Richard M., Ramirez-Gonzalez, Ricardo H., Verweij, Walter, Kawashima, Cintia G., Iqbal, Zamin, Jones, Jonathan D. G., Caccamo, Mario and MacLean, Daniel (2013) Identifying and classifying trait linked polymorphisms in non-reference species by walking coloured de Bruijn graphs. PLoS One, 8 (3). ISSN 1932-6203

Sohn, K. H., Hughes, R. K., Piquerez, S. J., Jones, Jonathan and Banfield, M. J. (2012) Distinct regions of the Pseudomonas syringae coiled-coil effector AvrRps4 are required for activation of immunity. Proceedings of the National Academy of Sciences, 109 (40). pp. 16371-16376. ISSN 0027-8424

Kemen, Eric and Jones, Jonathan D. G. (2012) Obligate biotroph parasitism: can we link genomes to lifestyles? Trends in Plant Science, 17 (8). pp. 448-457. ISSN 1360-1385

Sohn, Kee Hoon, Jones, Jonathan D. G. and Studholme, David J. (2012) Draft genome sequence of Pseudomonas syringae Pathovar Syringae Strain FF5, causal agent of stem tip dieback disease on ornamental pear. Journal of Bacteriology, 194 (14). pp. 3733-3734. ISSN 0021-9193

Solé, Montserrat, Popa, Crina, Mith, Oriane, Sohn, Kee Hoon, Jones, Jonathan D. G., Deslandes, Laurent and Valls, Marc (2012) The awr gene family encodes a novel class of Ralstonia solanacearum type III effectors displaying virulence and avirulence activities. Molecular Plant-Microbe Interactions, 25 (7). pp. 941-953. ISSN 0894-0282

Jupe, Florian, Pritchard, Leighton, Etherington, Graham J., Mackenzie, Katrin, Cock, Peter J. A., Wright, Frank, Sharma, Sanjeev Kumar, Bolser, Dan, Bryan, Glenn J., Jones, Jonathan D. G. and Hein, Ingo (2012) Identification and localisation of the NB-LRR gene family within the potato genome. BMC Genomics, 13. ISSN 1471-2164

Azam, Sarwar, Thakur, Vivek, Ruperao, Pradeep, Shah, Trushar, Balaji, Jayashree, Amindala, BhanuPrakash, Farmer, Andrew D., Studholme, David J., May, Gregory D., Edwards, David, Jones, Jonathan D. G. and Varshney, Rajeev K. (2012) Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome. American Journal of Botany, 99 (2). pp. 186-192. ISSN 0002-9122

Caillaud, Marie-Cécile, Piquerez, Sophie J. M., Fabro, Georgina, Steinbrenner, Jens, Ishaque, Naveed, Beynon, Jim and Jones, Jonathan D. G. (2012) Subcellular localization of the Hpa RxLR effector repertoire identifies a tonoplast-associated protein HaRxL17 that confers enhanced plant susceptibility. The Plant Journal, 69 (2). pp. 252-265. ISSN 0960-7412

Caillaud, Marie-Cécile, Piquerez, Sophie J. M. and Jones, Jonathan D. G. (2012) Characterization of the membrane-associated HaRxL17 Hpa effector candidate. Plant Signaling & Behavior, 7 (1). pp. 145-149. ISSN 1559-2316

Kemen, Eric, Gardiner, Anastasia, Schultz-Larsen, Torsten, Kemen, Ariane C., Balmuth, Alexi, Robert-Seilaniantz, Alexandre, Bailey, Kate, Holub, Eric, Studholme, David J., MacLean, Dan and Jones, Jonathan D. G. (2011) Gene gain and loss during evolution of obligate parasitism in the white rust pathogen of Arabidopsis thaliana. PLoS Biology, 9 (7).

Fabro, Georgina, Steinbrenner, Jens, Coates, Mary, Ishaque, Naveed, Baxter, Laura, Studholme, David J., Körner, Evelyn, Allen, Rebecca L., Piquerez, Sophie J. M., Rougon-Cardoso, Alejandro, Greenshields, David, Lei, Rita, Badel, Jorge L., Caillaud, Marie-Cecile, Sohn, Kee-Hoon, van den Ackerveken, Guido, Parker, Jane E., Beynon, Jim and Jones, Jonathan D. (2011) Multiple candidate effectors from the oomycete pathogen Hyaloperonospora arabidopsidis suppress host plant immunity. PLoS Pathogens, 7 (11).

Lacombe, Séverine, Rougon-Cardoso, Alejandra, Sherwood, Emma, Peeters, Nemo, Dahlbeck, Douglas, van Esse, H Peter, Smoker, Matthew, Rallapalli, Ghanasyam, Thomma, Bart P H J, Staskawicz, Brian, Jones, Jonathan D G and Zipfel, Cyril (2010) Interfamily transfer of a plant pattern-recognition receptor confers broad-spectrum bacterial resistance. Nature Biotechnology, 28 (4). pp. 365-369. ISSN 1546-1696

Nemri, Adnane, Atwell, Susanna, Tarone, Aaron M., Huang, Yu S., Zhao, Keyan, Studholme, David J., Nordborg, Magnus and Jones, Jonathan D. G. (2010) Genome-wide survey of Arabidopsis natural variation in downy mildew resistance using combined association and linkage mapping. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 107 (22). pp. 10302-10307. ISSN 1091-6490

Nekrasov, Vladimir, Li, Jing, Batoux, Martine, Roux, Milena, Chu, Zhao-Hui, Lacombe, Severine, Rougon, Alejandra, Bittel, Pascal, Kiss-Papp, Marta, Chinchilla, Delphine, van Esse, H Peter, Jorda, Lucia, Schwessinger, Benjamin, Nicaise, Valerie, Thomma, Bart P H J, Molina, Antonio, Jones, Jonathan D G and Zipfel, Cyril (2009) Control of the pattern-recognition receptor EFR by an ER protein complex in plant immunity. The EMBO Journal, 28 (21). pp. 3428-3438. ISSN 0261-4189

Li, Jing, Zhao-Hui, Chu, Batoux, Martine, Nekrasov, Vladimir, Roux, Milena, Chinchilla, Delphine, Zipfel, Cyril and Jones, Jonathan D G (2009) Specific ER quality control components required for biogenesis of the plant innate immune receptor EFR. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 106 (37). pp. 15973-15978. ISSN 1091-6490

Haas, Brain J., Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Zody, Michael C., Jiang, Rays H. Y., Handsaker, Robert E., Cano Mogrovejo, Liliana M., Grabherr, Manfred, Kodira, Chinnappa D., Raffaele, Sylvain, Torto-Alalibo, Trudy, Bozkurt, Tolga O., Ah-Fong, Audrey M. V., Alvarado, Lucia, Anderson, Vicky L., Armstrong, Miles R., Avrova, Anna, Baxter, Laura, Beynon, Jim, Boevink, Petra C., Bollmann, Stephanie R., Bos, Jorunn I. B., Bulone, Vincent, Cai, Guohong, Cakir, Cahid, Carrington, James C., Chawner, Megan, Conti, Lucio, Costanzo, Stefano, Ewan, Richard, Fahlgren, Noah, Fischbach, Michael A., Fugelstad, Johanna, Gilroy, Eleanor M., Gnerre, Sante, Green, Pamela J., Grenville-Briggs, Laura J., Griffith, John, Grünwald, Niklaus J., Horn, Karolyn, Horner, Neil R., Hu, Chia-Hui, Huitema, Edgar, Jeong, Dong-Hoon, Jones, Alexandra M. E., Jones, Jonathan D. G., Jones, Richard W., Karlsson, Elinor K., Kunjeti, Sridhara G., Lamour, Kurt, Liu, Zhenyu, Ma, LiJun, MacLean, Daniel, Chibucos, Marcus C., McDonald, Hayes, McWalters, Jessica, Meijer, Harold J. G., Morgan, William, Morris, Paul F., Munro, Carol A., O’Neill, Keith, Ospina-Giraldo, Manuel, Pinzón, Andrés, Pritchard, Leighton, Ramsahoye, Bernard, Ren, Qinghu, Restrepo, Silvia, Roy, Sourav, Sadanandom, Ari, Savidor, Alon, Schornack, Sebastian, Schwartz, David C., Schumann, Ulrike D., Schwessinger, Ben, Seyer, Lauren, Sharpe, Ted, Silvar, Cristina, Song, Jing, Studholme, David J., Sykes, Sean, Thines, Marco, van de Vondervoort, Peer J. I., Phuntumart, Vipaporn, Wawra, Stephan, Weide, Rob, Win, Joe, Young, Carolyn, Zhou, Shiguo, Fry, William, Meyers, Blake C., van West, Pieter, Ristaino, Jean, Govers, Francine, Birch, Paul R. J., Whisson, Stephen C., Judelson, Howard S. and Nusbaum, Chad (2009) Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature, 461 (7262). pp. 393-398. ISSN 0028-0836

Wang, Guodong, Ellendorff, Ursula, Kemp, Ben, Mansfield, John W, Forsyth, Alec, Mitchell, Kathy, Bastas, Kubilay, Liu, Chun-Ming, Woods-Tör, Alison, Zipfel, Cyril, de Wit, Pierre J G M, Jones, Jonathan D G, Tör, Mahmut and Thomma, Bart P H J (2008) A genome-wide functional investigation into the roles of receptor-like proteins in Arabidopsis. Plant Physiology, 147 (2). pp. 503-17. ISSN 0032-0889

van den Burg, Harrold A., Tsitsigiannis, Dimitrios I., Rowland, Owen, Lo, Jane, Rallapalli, Ghanasyam, Maclean, Daniel, Takken, Frank L. W. and Jones, Jonathan D. G. (2008) The F-Box protein ACRE189/ACIF1 regulates cell death and defense responses activated during pathogen recognition in tobacco and tomato. The Plant Cell, 20 (3). pp. 697-719. ISSN 1040-4651

Navarro, Lionel, Bari, Rajendra, Archard, Patrick, Lison, Purificación, Nemri, Adnane, Harberd, Nicholas P. and Jones, Jonathan D. G. (2008) DELLAs control plant immune responses by modulating the balance of jasmonic acid and salicylic acid signaling. Current Biology, 18 (9). pp. 650-655. ISSN 1879-0445

Chinchilla, Delphine, Zipfel, Cyril, Robatzek, Silke, Kemmerling, Birgit, Nürnberger, Thorsten, Jones, Jonathan D G, Felix, Georg and Boller, Thomas (2007) A flagellin-induced complex of the receptor FLS2 and BAK1 initiates plant defence. Nature, 448 (7152). pp. 497-500. ISSN 0028-0836

Zipfel, Cyril, Kunze, Gernot, Chinchilla, Delphine, Caniard, Anne, Jones, Jonathan D G, Boller, Thomas and Felix, Georg (2006) Perception of the bacterial PAMP EF-Tu by the receptor EFR restricts Agrobacterium-mediated transformation. Cell, 125 (4). pp. 749-60. ISSN 0092-8674

Kolade, Olatomirin O., Bamford, Vicki A., Anton, Gema Ancillo, Jones, Jonathan D. G., Vera, Pablo and Hemmings, Andrew M. ORCID: https://orcid.org/0000-0003-3053-3134 (2006) In vitro characterization of the cysteine-rich capping domains in a plant leucine rich repeat protein. Biochimica et Biophysica Acta - Proteins and Proteomics, 1764 (6). pp. 1043-1053.

Navarro, Lionel, Zipfel, Cyril, Rowland, Owen, Keller, Ingo, Robatzek, Silke, Boller, Thomas and Jones, Jonathan D G (2004) The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis. Plant Physiology, 135 (2). pp. 1113-1128. ISSN 0032-0889

Zipfel, Cyril, Robatzek, Silke, Navarro, Lionel, Oakeley, Edward J, Jones, Jonathan D G, Felix, Georg and Boller, Thomas (2004) Bacterial disease resistance in Arabidopsis through flagellin perception. Nature, 428 (6984). pp. 764-7. ISSN 0028-0836

Wulff, Brand B. H., Thomas, Colwyn M., Parniske, Martin and Jones, Jonathan D. G. (2004) Genetic variation at the tomato Cf-4/Cf-9 locus induced by EMS mutagenesis and intralocus recombination. Genetics, 167 (1). pp. 459-470. ISSN 0016-6731

Wulff, Brande B. H., Kruijt, Marco, Collins, Peter L., Thomas, Colwyn M., Ludwig, Andrea A., De Wit, Pierre J. G. M. and Jones, Jonathan D. G. (2004) Gene shuffling-generated and natural variants of the tomato resistance gene Cf-9 exhibit different auto-necrosis-inducing activities in Nicotiana species. The Plant Journal, 40 (6). pp. 942-956. ISSN 1365-313X

Peart, Jack R., Lu, Rui, Sadanandom, Ari, Malcuit, Isabelle, Moffett, Peter, Brice, David C., Schauser, Leif, Jaggard, Daniel A. W., Xiao, Shunyuan, Coleman, Mark J., Dow, Max, Jones, Jonathan D. G., Shirasu, Ken and Baulcombe, David C. (2002) Ubiquitin ligase-associated protein SGT1 is required for host and nonhost disease resistance in plants. Proceedings of the National Academy of Sciences USA, 99 (16). pp. 10865-10869. ISSN 1091-6490

Bertioli, David J., Guimraes, Patricia M., Jones, Jonathan D. G., Thomas, Colwyn M., Burrows, Paul R., Monte, Damares C. and Leal-Bertioli, Soraya C. D. (2001) Expression of tomato Cf genes and their corresponding avirulence genes in transgenic tobacco plants using nematode responsive promoters. Annals of Applied Biology, 138 (3). pp. 333-342. ISSN 1744-7348

Wulff, Brande B. H., Thomas, Colwyn M., Smoker, Matthew, Grant, Murray and Jones, Jonathan D. G. (2001) Domain swapping and gene shuffling identify sequences required for induction of an Avr-dependent hypersensitive response by the tomato Cf-4 and Cf-9 proteins. The Plant Cell, 13 (2). pp. 255-272. ISSN 1040-4651

van der Biezen, Erik A., Sun, Jongho, Coleman, Mark J., Bibb, Mervyn J. and Jones, Jonathan D. G. (2000) Arabidopsis RelA/SpoT homologs implicate (p)ppGpp in plant signaling. Proceedings of the National Academy of Sciences, 97 (7). pp. 3747-3752. ISSN 0027-8424

Botella, Miguel A., Coleman, Mark J., Hughes, Douglas E., Nishimura, Marc T., Jones, Jonathan D. G. and Somerville, Shauna C. (1997) Map positions of 47 Arabidopsis sequences with sequence similarity to disease resistance genes. The Plant Journal, 12 (5). pp. 1197-1211. ISSN 0960-7412

Parker, J. E., Coleman, M. J., Szabo, V., Frost, L. N., Schmidt, R., van der Biezen, E. A., Moores, T., Dean, C., Daniels, M. J. and Jones, J. D. (1997) The Arabidopsis downy mildew resistance gene RPP5 shares similarity to the toll and interleukin-1 receptors with N and L6. The Plant Cell, 9 (6). pp. 879-894. ISSN 1040-4651