Items where Author is "Murrell, Colin"

Published

Sims, Leanne, Wright, Chloe, Crombie, Andrew, Dawson, Robin, Lockwood, Colin, Le Brun, Nick ORCID: https://orcid.org/0000-0001-9780-4061, Lehtovirta-Morley, Laura and Murrell, Colin (2023) Whole cell studies of substrate and inhibitor specificity of isoprene monooxygenase and related enzymes. Environmental Microbiology Reports, 15 (6). pp. 809-819. ISSN 1758-2229

Dawson, Robin A., Rix, Gregory D., Crombie, Andrew T. and Murrell, J. Colin (2022) ‘Omics-guided prediction of the pathway for metabolism of isoprene by Variovorax sp. WS11. Environmental Microbiology, 24 (11). pp. 5151-5164. ISSN 1462-2912

Liu, Jingli, Xue, Chun-Xu, Wang, Jinyan, Crombie, Andrew T., Carrión, Ornella, Johnston, Andrew W. B., Murrell, J. Colin, Liu, Ji, Zheng, Yanfen, Zhang, Xiao-Hua and Todd, Jonathan D. (2022) Oceanospirillales containing the DMSP lyase DddD are key utilisers of carbon from DMSP in coastal seawater. Microbiome, 10. ISSN 2049-2618

Farhan Ul Haque, Muhammad, Hernández, Marcela ORCID: https://orcid.org/0000-0002-1041-785X, Crombie, Andrew T. and Murrell, J. Colin (2022) Identification of active gaseous-alkane degraders at natural gas seeps. The ISME Journal, 16 (7). 1705–1716. ISSN 1751-7362

Sims, Leanne P., Lockwood, Colin W. J., Crombie, Andrew T., Bradley, Justin M., Le Brun, Nick E. ORCID: https://orcid.org/0000-0001-9780-4061 and Murrell, J. Colin (2022) Purification and characterization of the isoprene monooxygenase from Rhodococcus sp. strain AD45. Applied and Environmental Microbiology, 88 (7). ISSN 0099-2240

Uttarotai, Toungporn, Sutheeworapong, Sawannee, Crombie, Andrew T., Murrell, J. Colin, Mhuantong, Wuttichai, Noirungsee, Nuttapol, Wangkarn, Sunanta, Bovonsombut, Sakunnee, McGenity, Terry J. and Chitov, Thararat (2022) Genome characterisation of an isoprene-degrading Alcaligenes sp. isolated from a tropical restored forest. Biology, 11 (4). ISSN 2079-7737

Wagstaff, Ben A., Pratscher, Jennifer, Rivera, Peter Paolo L., Hems, Edward S., Brooks, Elliot, Rejzek, Martin, Todd, Jonathan D., Murrell, J. Colin and Field, Robert A. (2021) Assessing the toxicity and mitigating the impact of harmful Prymnesium blooms in eutrophic waters of the Norfolk Broads. Environmental Science & Technology, 55 (24). 16538–16551. ISSN 0013-936X

Yun, Juanli, Crombie, Andrew T., Haque, Muhammad Farhan Ul, Cai, Yuanfeng, Zheng, Xiaowei, Wang, Jian, Jia, Zhongjun, Murrell, J. Colin, Wang, Yanfen and Du, Wenbin (2021) Revealing the community and metabolic potential of active methanotrophs by targeted metagenomics in the Zoige wetland of the Tibetan Plateau. Environmental Microbiology, 23 (11). pp. 6520-6535. ISSN 1462-2912

Worsley, Sarah F., Innocent, Tabitha M., Holmes, Neil A., Al-Bassam, Mahmoud M., Schiøtt, Morten, Wilkinson, Barrie, Murrell, J. Colin, Boomsma, Jacobus J., Yu, Douglas W. and Hutchings, Matthew I. (2021) Competition-based screening helps to secure the evolutionary stability of a defensive microbiome. BMC Biology, 19 (1). ISSN 1741-7007

Gibson, Lisa, Crombie, Andrew T., McNamara, Niall P. and Murrell, J. Colin (2021) Isoprene-degrading bacteria associated with the phyllosphere of Salix fragilis, a high isoprene-emitting willow of the Northern Hemisphere. Environmental Microbiome, 16 (1). ISSN 2524-6372

Worsley, Sarah, Newitt, Jake, Rassbach, Johannes, Batey, Sybil, Holmes, Neil A., Murrell, Colin, Wilkinson, Barrie and Hutchings, Matt (2021) Streptomyces endophytes promote host health and enhance growth across plant species. Applied and Environmental Microbiology, 86 (16). ISSN 0099-2240

Dawson, R. A., Crombie, A. T., Pichon, P., Steinke, M., McGenity, T. J. and Murrell, J. C. (2021) The microbiology of isoprene cycling in aquatic ecosystems. Aquatic Microbial Ecology, 87. pp. 79-98. ISSN 0948-3055

Prudence, Samuel M. M., Newitt, Jake T., Worsley, Sarah F., Macey, Michael C., Murrell, J. Colin, Lehtovirta-Morley, Laura E. and Hutchings, Matthew I. (2021) Soil, senescence and exudate utilisation: characterisation of the Paragon var. spring bread wheat root microbiome. Environmental Microbiome, 16 (1). ISSN 2524-6372

Worsley, Sarah F., Macey, Michael C., Prudence, Samuel M. M., Wilkinson, Barrie, Murrell, J. Colin and Hutchings, Matthew I. (2021) Investigating the role of root exudates in recruiting Streptomyces bacteria to the Arabidopsis thaliana microbiome. Frontiers in Molecular Biosciences, 8. ISSN 2296-889X

Uttarotai, Toungporn, McKew, Boyd A., Benyahia, Farid, Murrell, J. Colin, Mhuantong, Wuttichai, Wangkarn, Sunanta, Chitov, Thararat, Bovonsombut, Sakunnee and McGenity, Terry J. (2021) Isoprene-degrading bacteria from soils associated with tropical economic crops and framework forest trees. Microorganisms, 9 (5). ISSN 2076-2607

Islam, Tajul, Hernández, Marcela ORCID: https://orcid.org/0000-0002-1041-785X, Gessesse, Amare, Murrell, J. Colin and Øvreås, Lise (2021) A novel moderately thermophilic facultative methylotroph within the class Alphaproteobacteria. Microorganisms, 9 (3). ISSN 2076-2607

Xu, Hui-Juan, Bai, Jing, Li, Wenyan, Murrell, J. Colin, Zhang, Yulong, Wang, Jinjin, Luo, Chunling and Li, Yongtao (2021) Mechanisms of the enhanced DDT removal from soils by earthworms: identification of DDT degraders in drilosphere and non-drilosphere matrices. Journal of Hazardous Materials, 404 (B). ISSN 0304-3894

Farhan Ul Haque, Muhammad, Xu, Hui-Juan, Murrell, J. Colin and Crombie, Andrew (2020) Facultative methanotrophs - diversity, genetics, molecular ecology and biotechnological potential:a mini-review. Microbiology, 166 (10). pp. 894-908. ISSN 1350-0872

Larke-Mejía, Nasmille L., Carrión, Ornella, Crombie, Andrew T., Mcgenity, Terry J. and Murrell, J. Colin (2020) Sphingopyxis sp. strain OPL5, an isoprene-degrading bacterium from the Sphingomonadaceae family isolated from oil palm leaves. Microorganisms, 8 (10). ISSN 2076-2607

Bordel, Sergio, Crombie, Andrew T., Muñoz, Raúl and Murrell, J. Colin (2020) Genome scale metabolic model of the versatile methanotroph Methylocella silvestris. Microbial Cell Factories, 19 (1). ISSN 1475-2859

Carrión, Ornella, McGenity, Terry J. and Murrell, J. Colin (2020) Molecular ecology of isoprene-degrading bacteria. Microorganisms, 8 (7). ISSN 2076-2607

Murrell, J. Colin, Mcgenity, Terry J. and Crombie, Andrew T. (2020) Microbial metabolism of isoprene: a much-neglected climate-active gas. Microbiology, 166 (7). 600–613. ISSN 1350-0872

Gibson, Lisa, Larke-Mejía, Nasmille L. and Murrell, Colin (2020) Complete genome of isoprene degrading nocardioides sp. WS12. Microorganisms, 8 (6). ISSN 2076-2607

Carrion Fonseca, Ornella, Gibson, Lisa, Elias, Dafydd M. O., McNamara, Niall P., van Alen, Theo A., McGenity, Terry J., op den Camp, Huub J. M., Supramaniam, Christina Vimala, McGenity, Terry J. and Murrell, Colin (2020) Diversity of isoprene-degrading bacteria in phyllosphere and soil communities from a high isoprene-emitting environment: a Malaysian oil palm plantation. Microbiome, 8 (1). ISSN 2049-2618

Hopkins, Frances E., Suntharalingam, Parvadha, Gehlen, Marion, Andrews, Oliver, Archer, Stephen D., Bopp, Laurent, Buitenhuis, Erik ORCID: https://orcid.org/0000-0001-6274-5583, Dadou, Isabelle, Duce, Robert, Goris, Nadine, Jickells, Tim, Johnson, Martin, Keng, Fiona, Law, Cliff S., Lee, Kitack, Liss, Peter S., Lizotte, Martine, Malin, Gillian ORCID: https://orcid.org/0000-0002-3639-9215, Murrell, J. Colin, Naik, Hema, Rees, Andrew P., Schwinger, Jörg and Williamson, Phillip ORCID: https://orcid.org/0000-0003-4149-5110 (2020) The impacts of ocean acidification on marine trace gases and the implications for atmospheric chemistry and climate. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences, 476 (2237). ISSN 1364-5021

Schwartz-Narbonne, Rachel, Schaeffer, Philippe, Hopmans, Ellen C., Schenesse, Margot, Charlton, E. Alex, Jones, D. Martin, Sinninghe Damsté, Jaap S., Farhan Ul Haque, Muhammad, Jetten, Mike S. M., Lengger, Sabine K., Murrell, J. Colin, Normand, Philippe, Nuijten, Guylaine H. l., Talbot, Helen M. and Rush, Darci (2020) A unique bacteriohopanetetrol stereoisomer of marine anammox. Organic Geochemistry, 143. ISSN 0146-6380

Macey, Michael C., Pratscher, Jennifer, Crombie, Andrew T. and Murrell, J. Colin (2020) Impact of plants on the diversity and activity of methylotrophs in soil. Microbiome, 8 (1). ISSN 2049-2618

Dawson, Robin A., Larke-Mejía, Nasmille L., Crombie, Andrew T., Ul Haque, Muhammad Farhan and Murrell, J. Colin (2020) Isoprene oxidation by the gram-negative model bacterium variovorax sp. WS11. Microorganisms, 8 (3). ISSN 2076-2607

Islam, Tajul, Gessesse, Amare, Garcia-Moyano, Antonio, Murrell, J. Colin and Øvreås, Lise (2020) A novel moderately thermophilic type ib methanotroph isolated from an alkaline thermal spring in the Ethiopian rift valley. Microorganisms, 8 (2). ISSN 2076-2607

Williams, Beth T. ORCID: https://orcid.org/0000-0002-8594-1269, Cowles, Kasha, Bermejo Martinez, Ana, Curson, Andrew R. J., Zheng, Yanfen, Liu, Jingli, Payne, Simone, Hind, Andrew J., Li, Chun-Yang, Rivera, Peter, Carrion, Ornella, Liu, Ji, Spurgin, Lewis G., Brearley, Charles A. ORCID: https://orcid.org/0000-0001-6179-9109, Mackenzie, Brett Wanger, Pinchbeck, Benjamin J., Peng, Ming, Pratscher, Jennifer, Zhang, Xiao-Hua, Zhang, Yu-Zhong, Murrell, J. Colin and Todd, Jonathan D. (2019) Bacteria are important dimethylsulfoniopropionate producers in coastal sediments. Nature Microbiology, 4. pp. 1815-1825. ISSN 2058-5276

Petersen, Jörn, Vollmers, John, Ringel, Victoria, Brinkmann, Henner, Ellebrandt-Sperling, Claire, Spröer, Cathrin, Howat, Alexandra M, Murrell, J Colin and Kaster, Anne-Kristin (2019) A marine plasmid hitchhiking vast phylogenetic and geographic distances. Proceedings of the National Academy of Sciences of the United States of America, 116 (41). pp. 20568-20573. ISSN 1091-6490

Farhan Ul Haque, Muhammad, Crombie, Andrew T. and Murrell, J. Colin (2019) Novel facultative Methylocella strains are active methane consumers at terrestrial natural gas seeps. Microbiome, 7. ISSN 2049-2618

Taubert, Martin, Grob, Carolina, Crombie, Andrew, Howat, Alexandra, Burns, Oliver, Weber, Miriam, Lott, Christian, Kaster, Anne-Kristin, Vollmers, John, Jehmlich, Nico, von Bergen, Martin, Chen, Yin and Murrell, Colin (2019) Communal metabolism by Methylococcaceae and Methylophilaceae is driving rapid aerobic methane oxidation in sediments of a shallow seep near Elba, Italy. Environmental Microbiology, 21 (10). pp. 3780-3795. ISSN 1462-2912

Carrion Fonseca, Ornella, Pratscher, Jenny, Richa, Kumari, Rostant, Wayne ORCID: https://orcid.org/0000-0002-3798-6251, Farhan Ul Haque, Muhammad, Murrell, John and Todd, Jonathan (2019) Methanethiol and dimethylsulfide cycling in Stiffkey saltmarsh. Frontiers in Microbiology, 10. ISSN 1664-302X

Zanardini, Elisabetta, May, Eric, Purdy, Kevin J. and Murrell, J. Colin (2019) Nutrient cycling potential within microbial communities on culturally important stoneworks. Environmental Microbiology Reports, 11 (2). pp. 147-154. ISSN 1758-2229

Crombie, Andrew T., Larke-Mejia, Nasmille L., Emery, Helen, Dawson, Robin, Pratscher, Jennifer, Murphy, Gordon P., McGenity, Terry J. and Murrell, J. Colin (2018) Poplar phyllosphere harbors disparate isoprene-degrading bacteria. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 115 (51). pp. 13081-13086. ISSN 0027-8424

Carrión, Ornella, Larke-Mejía, Nasmille L., Gibson, Lisa, Farhan Ul Haque, Muhammad, Ramiro-García, Javier, McGenity, Terry J. and Murrell, J. Colin (2018) Gene probing reveals the widespread distribution, diversity and abundance of isoprene-degrading bacteria in the environment. Microbiome, 6. ISSN 2049-2618

Jameson, Eleanor, Stephenson, Jason, Jones, Helen, Millard, Andrew, Kaster, Anne-Kristin, Purdy, Kevin J., Airs, Ruth, Murrell, J. Colin and Chen, Yin (2018) Deltaproteobacteria (Pelobacter) and Methanococcoides are responsible for choline-dependent methanogenesis in a coastal saltmarsh sediment. The ISME Journal, 13. 277–289. ISSN 1751-7362

Macey, Michael Christopher, Pratscher, Jennifer, Crombie, Andrew and Murrell, J. Colin (2018) Draft genome sequences of obligate Methylotrophs Methylovorus sp. strain MM2 and Methylobacillus sp. strain MM3, isolated from grassland soil. Microbiology Resource Announcements, 7 (8).

Sargeant, Stephanie L., Colin Murrell, J., Nightingale, Philip D. and Dixon, Joanna L. (2018) Basin-scale variability of microbial methanol uptake in the Atlantic Ocean. Biogeosciences, 15 (16). pp. 5155-5167. ISSN 1726-4170

Farhan Ul Haque, Muhammad, Crombie, Andrew T., Ensminger, Scott A., Baciu, Calin and Murrell, J. Colin (2018) Facultative methanotrophs are abundant at terrestrial natural gas seeps. Microbiome, 6. ISSN 2049-2618

Heine, Daniel, Holmes, Neil A., Worsley, Sarah F., Santos, Ana Carolina A., Innocent, Tabitha M., Scherlach, Kirstin, Patrick, Elaine H., Yu, Douglas W., Murrell, J Colin, Viera, Paulo C., Boomsma, Jacobus J., Hertweck, Christian, Hutchings, Matthew I. and Wilkinson, Barrie (2018) Chemical warfare between leafcutter ant symbionts and a co-evolved pathogen. Nature Communications, 9. ISSN 2041-1723

Howat, Alexandra M., Vollmers, John, Taubert, Martin, Grob, Carolina, Dixon, Joanna L., Todd, Jonathan D., Chen, Yin, Kaster, Anne-Kristin and Murrell, J. C. (2018) Comparative genomics and mutational analysis reveals a novel XoxF-utilizing methylotroph in the Roseobacter group isolated from the marine environment. Frontiers in Microbiology, 9. ISSN 1664-302X

Howat, Alexandra M., Vollmers, John, Taubert, Martin, Grob, Carolina, Dixon, Joanna L., Todd, Jonathan D., Chen, Yin, Kaster, Anne-Kristin and Murrell, J. C. (2018) Comparative Genomics and Mutational Analysis Reveals a Novel XoxF-Utilizing Methylotroph in the Roseobacter Group Isolated From the Marine Environment. Frontiers in Microbiology, 9. ISSN 1664-302X

Khmelenina, Valentina N., Murrell, J. Colin, Smith, Thomas J. and Trotsenko, Yuri A. (2018) Physiology and Biochemistry of the Aerobic Methanotrophs. In: Aerobic Utilization of Hydrocarbons, Oils and Lipids. Springer, pp. 1-25. ISBN 978-3-319-39782-5

McGenity, Terry J., Crombie, Andrew T. and Murrell, J. Colin (2018) Microbial cycling of isoprene, the most abundantly produced biological volatile organic compound on Earth. The ISME Journal, 12 (4). 931–941. ISSN 1751-7362

Wagstaff, Ben A., Hems, Edward S., Rejzek, Martin, Pratscher, Jennifer, Brooks, Elliot, Kuhaudomlarp, Sakonwan, O'Neill, Ellis C., Donaldson, Matthew I., Lane, Steven, Currie, John, Hindes, Andrew M., Malin, Gill ORCID: https://orcid.org/0000-0002-3639-9215, Murrell, J. Colin and Field, Robert A. (2018) Insights into toxic Prymnesium parvum blooms: the role of sugars and algal viruses. Biochemical Society Transactions, 46 (2). pp. 413-421. ISSN 0300-5127

Wang, Jing, Geng, Kan, Farhan Ul Haque, Muhammad, Crombie, Andrew, Street, Lorna E., Wookey, Philip A., Ma, Ke, Murrell, J. Colin and Pratscher, Jennifer (2018) Draft genome sequence of Methylocella silvestris TVC, a facultative methanotroph isolated from permafrost. Genome Announcements, 6 (8).

Bellini, M. Inés, Kumaresan, Deepak, Tarlera, Silvana, Murrell, J. Colin and Scavino, Ana Fernández (2018) Identification of active denitrifiers by DNA-Stable Isotope Probing and amplicon sequencing reveals Betaproteobacteria as responsible for attenuation of nitrate contamination in a low impacted aquifer. FEMS Microbiology Ecology, 94 (2). ISSN 0168-6496

Kumaresan, Deepak, Stephenson, Jason, Doxey, Andrew C., Bandukwala, Hina, Brooks, Elliot, Hillebrand-Voiculescu, Alexandra, Whiteley, Andrew S. and Murrell, J Colin (2018) Aerobic proteobacterial methylotrophs in Movile Cave: genomic and metagenomic analyses. Microbiome, 6. ISSN 2049-2618

Crombie, Andrew T., Mejia-Florez, Nasmille L., McGenity, Terry J. and Murrell, J. Colin (2017) Genetics and Ecology of Isoprene Degradation. In: Aerobic Utilization of Hydrocarbons, Oils and Lipids. Springer. ISBN 978-3-319-39782-5

Crombie, Andrew T., Emery, Helen, McGenity, Terry J. and Murrell, J. Colin (2017) Draft genome sequences of three terrestrial isoprene-degrading Rhodococcus strains. Genome Announcements, 5 (45).

Carrión, Ornella, Pratscher, Jennifer, Curson, Andrew R. J., Williams, Beth T. ORCID: https://orcid.org/0000-0002-8594-1269, Rostant, Wayne G. ORCID: https://orcid.org/0000-0002-3798-6251, Murrell, J. Colin and Todd, Jonathan D. (2017) Methanethiol-dependent dimethylsulfide production in soil environments. The ISME Journal, 11 (10). 2379–2390. ISSN 1751-7362

Kolb, Steffen, Horn, Marcus A., Murrell, J. Colin and Knief, Claudia (2017) Editorial: The Impact of Microorganisms on Consumption of Atmospheric Trace Gases. Frontiers in Microbiology, 8. ISSN 1664-302X

Johnston, Antonia, Crombie, Andrew T., El Khawand, Myriam, Sims, Leanne, Whited, Gregg M., McGenity, Terry J. and Murrell, J. Colin (2017) Identification and characterisation of isoprene-degrading bacteria in an estuarine environment. Environmental Microbiology, 19 (9). 3526–3537. ISSN 1462-2912

Frindte, Katharina, Kalyuzhnaya, Marina G., Bringel, Françoise, Dunfield, Peter F., Jetten, Mike S. M., Khmelenina, Valentina N., Klotz, Martin G., Murrell, J. Colin, op den Camp, Huub J. M., Sakai, Yasuyoshi, Semrau, Jeremy D., Shapiro, Nicole, DiSpirito, Alan A., Stein, Lisa Y., Svenning, Mette M., Trotsenko, Yuri A., Vuilleumier, Stéphane, Woyke, Tanja and Knief, Claudia (2017) Draft genome sequences of two gammaproteobacterial methanotrophs isolated from rice ecosystems. Genome Announcements, 5 (33).

Lock, Malcolm, Nichol, Tim, Murrell, J. Colin and Smith, Thomas J. (2017) Mutagenesis and expression of methane monooxygenase to alter regioselectivity with aromatic substrates. FEMS Microbiology Letters, 364 (13). ISSN 0378-1097

Taubert, Martin, Grob, Carolina, Howat, Alexandra M., Burns, Oliver J., Pratscher, Jennifer, Jehmlich, Nico, von Bergen, Martin, Richnow, Hans H., Chen, Yin and Murrell, J. Colin (2017) Methylamine as a nitrogen source for microorganisms from a coastal marine environment. Environmental Microbiology, 19 (6). 2246–2257. ISSN 1462-2912

Stephenson, Jason, Kumaresan, Deepak, Hillebrand-Voiculescu, Alexandra M., Brooks, Elliot, Whiteley, Andrew S. and Murrell, J. Colin (2017) Draft genome sequence of the methane-oxidizing bacterium “Candidatus Methylomonas sp. LWB” isolated from Movile Cave. Genome Announcements, 5 (3).

Song, Yizhi, Kaster, Anne-Kristin, Vollmers, John, Song, Yanqing, Davison, Paul A., Frentrup, Martinique, Preston, Gail M., Thompson, Ian P., Murrell, J. Colin, Yin, Huabing, Hunter, C. Neil and Huang, Wei E. (2017) Single-cell genomics based on Raman sorting reveals novel carotenoid-containing bacteria in the Red Sea. Microbial Biotechnology, 10 (1). 125–137. ISSN 1751-7915

Holmes, Neil A., Innocent, Tabitha M., Heine, Daniel, Al-Bassam, Mahmoud, Worsley, Sarah F., Trottman, Felix, Patrick, Elaine H., Yu, Douglas W., Murrell, J. Colin, Schiott, Morten, Wilkinson, Barrie, Boomsma, Jacobus J. and Hutchings, Matthew I. (2016) Genome analysis of two Pseudonocardia phylotypes associated with Acromyrmex leafcutter ants reveals their biosynthetic potential. Frontiers in Microbiology, 7. ISSN 1664-302X

Jameson, Eleanor, Taubert, Martin, Coyotzi, Sara, Chen, Yin, Eyice, Özge, Schäfer, Hendrik, Murrell, J. Colin, Neufeld, Josh D. and Dumont, Marc G. (2016) DNA-, RNA-, and Protein-Based Stable-Isotope Probing for High-Throughput Biomarker Analysis of Active Microorganisms. In: Metagenomics. Metagenomics . Springer, pp. 57-74. ISBN 978-1-4939-6689-9

Coyotzi, Sara, Pratscher, Jennifer, Murrell, J. Colin and Neufeld, Josh D. (2016) Targeted metagenomics of active microbial populations with stable-isotope probing. Current Opinion in Biotechnology, 41. pp. 1-8. ISSN 0958-1669

Jameson, Eleanor, Doxey, Andrew C., Airs, Ruth, Purdy, Kevin J., Murrell, J. Colin and Chen, Yin (2016) Metagenomic data-mining reveals contrasting microbial populations responsible for trimethylamine formation in human gut and marine ecosystems. Microbial Genomics, 2. ISSN 2057-5858

El Khawand, Myriam, Crombie, Andrew T., Johnston, Antonia, Vavlline, Dmitrii V., McAuliffe, Joseph C., Latone, Jacob A., Primak, Yuliya A., Lee, Sang-Kyu, Whited, Gregg M., McGenity, Terry J. and Murrell, J. Colin (2016) Isolation of isoprene degrading bacteria from soils, development of isoA gene probes and identification of the active isoprene degrading soil community using DNA-stable isotope probing. Environmental Microbiology, 18 (Thematic Issue on Microbial Mutualism and Symbiosis). 2743–2753. ISSN 1462-2912

Lidbury, Ian, Kröber, Eileen, Zhang, Zhidong, Zhu, Yijun, Murrell, J. Colin, Chen, Yin and Schäfer, Hendrik (2016) A mechanism for bacterial transformation of dimethylsulfide to dimethylsulfoxide: a missing link in the marine organic sulfur cycle. Environmental Microbiology, 18 (8). 2754–2766. ISSN 1462-2912

Dispirito, Alan A., Semrau, Jeremy D., Murrell, J. Colin, Gallagher, Warren H., Dennison, Christopher and Vuilleumier, Stephane (2016) Methanobactin and the link between copper and bacterial methane oxidation. Microbiology and Molecular Biology Reviews, 80 (2). pp. 387-409. ISSN 1092-2172

Sargeant, S. L., Murrell, J. C., Nightingale, P. D. and Dixon, J. L. (2016) Seasonal variability in microbial methanol utilisation in coastal waters of the western English Channel. Marine Ecology Progress Series, 550. pp. 53-64. ISSN 0171-8630

Esson, Kaitlin C., Lin, Xueju, Kumaresan, Deepak, Chanton, Jeffrey P., Murrell, J. Colin and Kostka, Joel E. (2016) Alpha- and gammaproteobacterial methanotrophs codominate the active methane-oxidizing communities in an acidic boreal peat bog. Applied and Environmental Microbiology, 82 (8). pp. 2363-2371. ISSN 0099-2240

Zanardini, Elisabetta, May, Eric, Inkpen, Robert, Cappitelli, Francesca, Murrell, J. Colin and Purdy, Kevin J. (2016) Diversity of archaeal and bacterial communities on exfoliated sandstone from Portchester Castle (UK). International Biodeterioration & Biodegradation, 109. pp. 78-87. ISSN 0964-8305

Flynn, James D., Hirayama, Hisako, Sakai, Yasuyoshi, Dunfield, Peter F., Klotz, Martin G., Knief, Claudia, Op Den Camp, Huub J. M., Jetten, Mike S. M., Khmelenina, Valentina N., Trotsenko, Yuri A., Murrell, J. Colin, Semrau, Jeremy D., Svenning, Mette M., Stein, Lisa Y., Kyrpides, Nikos, Shapiro, Nicole, Woyke, Tanja, Bringel, Françoise, Vuilleumier, Stéphane, Dispirito, Alan A. and Kalyuzhnaya, Marina G. (2016) Draft genome sequences of gammaproteobacterial methanotrophs isolated from marine ecosystems. Genome Announcements, 4 (1).

Nesme, Joseph, Achouak, Wafa, Agathos, Spiros, Bailey, Mark, Baldrian, Petr, Brunel, Dominique, Frostegard, Asa, Heulin, Thierry, Jansson, Janet K., Jurkevitch, Edouard, Kowalchuk, George A., Kruus, Kristiina L., Lagares, Antonio, Lapin-Scott, Hilary M., Le Paslier, Denis, Mandic-Mulec, Ines, Murrell, Colin, Myrold, David D., Nalin, Renaud, Nannipieri, Paolo, Neufeld, Josh D., O'Gara, Fergal, Parnell, John Jacob, Puhler, Alfred, Pylro, Victor, Ramos, Juan Luis, Roesch, Luiz, Schleper, Christa, Schloter, Michael, Sczyrba, Alexander, Sessitsch, Angela, Sjoling, Sara, Sorensen, Jan, Sorensen, Soren J., Tebbe, Christoph C., Topp, Ed, Tsiamis, George, Van Elsas, Jan Dirk, Van Keulen, Geertje, Wagner, Michael, Widmer, Franco, Zhang, Tong, Zhang, Xiaojun, Zhao, Liping, Zhu, Yong-Guan, Vogel, Timothy M. and Simonet, Pascal (2016) Back to the future of soil metagenomics. Frontiers in Microbiology, 7. ISSN 1664-302X

Lidbury, Ian, Kimberley, George, Scanlan, David J., Murrell, J. Colin and Chen, Yin (2015) Comparative genomics and mutagenesis analyses of choline metabolism in the marine Roseobacter clade. Environmental Microbiology, 17 (12). pp. 5048-5062. ISSN 1462-2912

Kumaresan, Deepak, Wischer, Daniela, Hillebrand-Voiculescu, Alexandra M. and Murrell, J. Colin (2015) Draft genome sequences of facultative methylotrophs, Gemmobacter sp. strain LW1 and Mesorhizobium sp. strain 1M-11, isolated from Movile Cave, Romania. Genome Announcements, 3 (6).

Grob, Carolina, Taubert, Martin, Howat, Alexandra M., Burns, Oliver J., Dixon, Joanna L., Richnow, Hans H., Jehmlich, Nico, von Bergen, Martin, Chen, Yin and Murrell, J. Colin (2015) Combining metagenomics with metaproteomics and stable isotope probing reveals metabolic pathways used by a naturally occurring marine methylotroph. Environmental Microbiology, 17 (10). pp. 4007-4018. ISSN 1462-2912

Taubert, Martin, Grob, Carolina, Howat, Alexandra M., Burns, Oliver J., Dixon, Joanna L., Chen, Yin and Murrell, J. Colin (2015) XoxF encoding an alternative methanol dehydrogenase is widespread in coastal marine environments. Environmental Microbiology, 17 (10). pp. 3937-3948. ISSN 1462-2912

McNamara, Niall P., Gregg, Ruth, Oakley, Simon, Stott, Andy, Rahman, Md. Tanvir, Murrell, J. Colin, Wardle, David A., Bardgett, Richard D. and Ostle, Nick J. (2015) Soil methane sink capacity response to a long-term wildfire chronosequence in Northern Sweden. PLoS One, 10 (9). ISSN 1932-6203

Vita, Nicholas, Platsaki, Semeli, Baslé, Arnaud, Allen, Stephen J., Paterson, Neil G., Crombie, Andrew T., Murrell, J. Colin, Waldron, Kevin J. and Dennison, Christopher (2015) A four-helix bundle stores copper for methane oxidation. Nature, 525. 140–143. ISSN 0028-0836

Crombie, Andrew T., Khawand, Myriam El, Rhodius, Virgil A., Fengler, Kevin A., Miller, Michael C., Whited, Gregg M., Mcgenity, Terry J. and Murrell, J. Colin (2015) Regulation of plasmid-encoded isoprene metabolism in Rhodococcus, a representative of an important link in the global isoprene cycle. Environmental Microbiology, 17 (9). pp. 3314-3329. ISSN 1462-2912

Islam, Tajul, Larsen, Øivind, Torsvik, Vigdis, Øvreås, Lise, Panosyan, Hovik, Murrell, J. Colin, Birkeland, Nils-Kåre and Bodrossy, Levente (2015) Novel methanotrophs of the family Methylococcaceae from different geographical regions and habitats. Microorganisms, 3 (3). pp. 484-499. ISSN 2076-2607

Nichol, Tim, Murrell, J. Colin and Smith, Thomas J. (2015) Controlling the activities of the diiron centre in bacterial monooxygenases: Lessons from mutagenesis and biodiversity. European Journal of Inorganic Chemistry, 2015 (21). pp. 3419-3431. ISSN 1434-1948

Dedysh, Svetlana N., Naumoff, Daniil G., Vorobev, Alexey V., Kyrpides, Nikos, Woyke, Tanja, Shapiro, Nicole, Crombie, Andrew T., Murrell, J. Colin, Kalyuzhnaya, Marina G., Smirnova, Angela V. and Dunfield, Peter F. (2015) Draft genome sequence of Methyloferula stellata AR4, an obligate methanotroph possessing only a soluble methane monooxygenase. Genome Announcements, 3 (2).

Grob, Carolina, Taubert, Martin, Howat, Alexandra M., Burns, Oliver J., Chen, Yin, Neufeld, Josh D. and Murrell, J. Colin (2015) Generating Enriched Metagenomes from Active Microorganisms with DNA Stable Isotope Probing. In: Hydrocarbon and Lipid Microbiology Protocols. Springer Protocols Handbooks . Springer, pp. 163-180. ISBN 978-3-662-50449-9

Sigdel, Sujan, Hui, Gao, Smith, Thomas J., Murrell, J. Colin and Lee, Jung-kul (2015) Molecular dynamics simulation to rationalize regioselective hydroxylation of aromatic substrates by soluble methane monooxygenase. Bioorganic & Medicinal Chemistry Letters, 25 (7). pp. 1611-1615. ISSN 0960-894X

Lidbury, Ian D. E. A., Murrell, J. Colin and Chen, Yin (2015) Trimethylamine and trimethylamine N-oxide are supplementary energy sources for a marine heterotrophic bacterium: implications for marine carbon and nitrogen cycling. The ISME Journal, 9 (3). pp. 760-769. ISSN 1751-7362

Wischer, Daniela, Kumaresan, Deepak, Johnston, Antonia, El Khawand, Myriam, Stephenson, Jason, Hillebrand-Voiculescu, Alexandra M., Chen, Yin and Murrell, J. Colin (2015) Bacterial metabolism of methylated amines and identification of novel methylotrophs in Movile Cave. The ISME Journal, 9 (1). pp. 195-206. ISSN 1751-7362

Crombie, Andrew T. and Murrell, J. Colin (2014) Trace-gas metabolic versatility of the facultative methanotroph Methylocella silvestris. Nature, 510. 148–151. ISSN 0028-0836

Kumaresan, Deepak, Wischer, Daniela, Stephenson, Jason, Hillebrand-Voiculescu, Alexandra and Murrell, J. Colin (2014) Microbiology of Movile Cave - A chemolithoautotrophic ecosystem. Geomicrobiology Journal, 31 (3). pp. 186-193. ISSN 0149-0451

Lidbury, Ian, Murrell, J. Colin and Chen, Yin (2014) Trimethylamine N-oxide metabolism by abundant marine heterotrophic bacteria. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 111 (7). pp. 2710-2715. ISSN 0027-8424

Wischer, Daniela, Kumaresan, Deepak, Johnston, Andrew, El Khawand, Myriam, Stephenson, J, Hillebrand-Voiculescu, Alexandra, Chen, Y and Murrell, Colin (2014) Identification and characterization of active methylamine degrading bacteria in Movile Cave. The ISME Journal, 9. pp. 195-206. ISSN 1751-7362

Semrau, Jeremy D, Jagadevan, Sheeja, Dispirito, Alan A, Khalifa, Ashraf, Scanlan, Julie, Bergman, Brandt H, Freemeier, Brittani C, Baral, Bipin S, Bandow, Nathan L, Vorobev, Alexey, Haft, Daniel H, Vuilleumier, Stéphane and Murrell, J Colin (2013) Methanobactin and MmoD work in concert to act as the 'copper-switch' in methanotrophs. Environmental Microbiology, 15 (11). pp. 3077-3086. ISSN 1462-2912

Nazaries, Loïc, Murrell, J Colin, Millard, Pete, Baggs, Liz and Singh, Brajesh K (2013) Methane, microbes and models:fundamental understanding of the soil methane cycle for future predictions. Environmental Microbiology, 15 (9). pp. 2395-2417. ISSN 1462-2912

Nazaries, Loïc, Pan, Yao, Bodrossy, Levente, Baggs, Elizabeth M., Millard, Peter, Murrell, J. Colin and Singh, Brajesh K. (2013) Evidence of microbial regulation of biogeochemical cycles from a study on methane flux and land use change. Applied and Environmental Microbiology, 79 (13). pp. 4031-4040. ISSN 0099-2240

Paul Antony, Chakkiath, Kumaresan, Deepak, Hunger, Sindy, Drake, Harold L, Murrell, Colin and Shouche, Yogesh S (2013) Microbiology of Lonar Lake and other soda lakes. The ISME Journal, 7 (6). p. 1252. ISSN 1751-7362

Dixon, Joanna L, Sargeant, Stephanie, Nightingale, Philip D and Murrell, Colin (2013) Gradients in microbial methanol uptake:productive coastal upwelling waters to oligotrophic gyres in the Atlantic Ocean. The ISME Journal, 7 (3). pp. 568-80. ISSN 1751-7362

Antony, Chakkiath Paul, Doronina, Nina V., Boden, Rich, Trotsenko, Yuri A., Shouche, Yogesh S. and Murrell, J. Colin (2012) Methylophaga lonarensis sp. nov., a novel moderately haloalkaliphilic methylotroph isolated from the soda lake sediments of a meteorite impact crater. International Journal of Systematic and Evolutionary Microbiology, 62. pp. 1613-1618. ISSN 1466-5026

Boden, Rich, Cleland, David, Green, Peter N., Katayama, Yoko, Uchino, Yoshihito, Murrell, J. Colin and Kelly, Donovan P. (2012) Phylogenetic assessment of culture collection strains of Thiobacillus thioparus, and definitive 16S rRNA gene sequences for T. thioparus, T. denitrificans, and Halothiobacillus neapolitanus. Archives of Microbiology, 194 (3). pp. 187-195. ISSN 0302-8933

Boden, Rich and Murrell, J. Colin (2011) Response to mercury (II) ions in Methylococcus capsulatus (Bath). FEMS Microbiology Letters, 324 (2). pp. 106-110. ISSN 0378-1097

Chen, Y, Kumaresan, D and Murrell, JC (2011) Stable isotope probing and its applications in soil microbiology. In: Handbook of Soil Science (2nd Edition). CRC Press, pp. 30-38. ISBN 978-0-8493-3136-7

Chen, Yin, Patel, Nisha A., Crombie, Andrew, Scrivens, James H. and Murrell, J. Colin (2011) Bacterial flavin-containing monooxygenase is trimethylamine monooxygenase. Proceedings of the National Academy of Sciences, 108 (43). pp. 17791-17796. ISSN 0027-8424

Kumaresan, Deepak, Stralis-Pavese, Nancy, Abell, Guy C. J., Bodrossy, Levente and Murrell, J. Colin (2011) Physical disturbance to ecological niches created by soil structure alters community composition of methanotrophs. Environmental Microbiology Reports, 3 (5). pp. 613-621. ISSN 1758-2229

Boden, Rich, Murrell, J. Colin and Schäfer, Hendrik (2011) Dimethylsulfide is an energy source for the heterotrophic marine bacterium Sagittula stellata. FEMS Microbiology Letters, 322 (2). pp. 188-193. ISSN 1574-6968

Rahman, M. Tanvir, Crombie, Andrew, Moussard, Hélène, Chen, Yin and Murrell, J. Colin (2011) Acetate repression of methane oxidation by supplemental Methylocella silvestris in a peat soil microcosm. Applied and Environmental Microbiology, 77 (12). pp. 4234-4236. ISSN 0099-2240

Boden, Rich, Borodina, Elena, Wood, Ann P., Kelly, Donovan P., Murrell, J. Colin and Schafer, Hendrik (2011) Purification and characterization of dimethylsulfide monooxygenase from Hyphomicrobium sulfonivorans. Journal of Bacteriology, 193 (5). pp. 1250-1258. ISSN 0021-9193

Cunliffe, Michael, Upstill-Goddard, Robert C. and Murrell, J. Colin (2011) Microbiology of aquatic surface microlayers. FEMS Microbiology Reviews, 35 (2). pp. 233-246. ISSN 1574-6976

Cébron, Aurélie, Louvel, Brice, Faure, Pierre, France-Lanord, Christian, Chen, Yin, Murrell, J. Colin and Leyval, Corinne (2011) Root exudates modify bacterial diversity of phenanthrene degraders in PAH-polluted soil but not phenanthrene degradation rates. Environmental Microbiology, 13 (3). pp. 722-736. ISSN 1462-2920

Murrell, JC and Whiteley, AS, eds. (2011) Stable Isotope Probing and Related Technologies. American Society for Microbiology. ISBN 978-1-55581-537-0

Avrahami, Sharon, Jia, Zhongjun, Neufeld, Josh D., Murrell, J. Colin, Conrad, Ralf and Küsel, Kirsten (2011) Active autotrophic ammonia-oxidizing bacteria in biofilm enrichments from simulated creek ecosystems at two ammonium concentrations respond to temperature manipulation. Applied and Environmental Microbiology, 77 (20). pp. 7329-7338. ISSN 0099-2240

Boden, Rich, Ferriera, Steve, Johnson, Justin, Kelly, Donovan P., Murrell, J. Colin and Schafer, Hendrik (2011) Draft Genome Sequence of the Chemolithoheterotrophic, Halophilic Methylotroph Methylophaga thiooxydans DMS010. Journal of Bacteriology, 193 (12). pp. 3154-3155. ISSN 0021-9193

Chen, Y, Dumont, MG, Neufeld, JD, McNamara, NP and Murrell, JC (2011) Towards “Focused” Metagenomics:A Case Study Combining DNA Stable-Isotope Probing, Multiple Displacement Amplification, and Metagenomics. In: Handbook of Molecular Microbial Ecology I. Wiley, New Jersey, USA.

Chen, Yin, Neufeld, Josh D., Dumont, Marc G., Friedrich, Michael W. and Murrell, J. Colin (2011) Metagenomic analysis of isotopically labelled DNA. In: Metagenomics: Methods and Protocols. Methods in Molecular Biology . Humana Press, NJ, USA, pp. 67-75. ISBN 978-1-60761-822-5

Crombie, A and Murrell, JC (2011) Genetic systems for the facultative methanotroph Methylocella silvestris. In: Methods in Enzymology 495 (Methods in Methane Metabolism). Elsevier, pp. 119-133.

Kumaresan, Deepak, Héry, Marina, Bodrossy, Levente, Singer, Andrew C., Stralis-Pavese, Nancy, Thompson, Ian P. and Murrell, J. Colin (2011) Earthworm activity in a simulated landfill cover soil shifts the community composition of active methanotrophs. Research in Microbiology, 162 (10). pp. 1027-1032. ISSN 1769-7123

Nazaries, Loïc, Tate, Kevin R., Ross, Des J., Singh, Jagrati, Dando, John, Saggar, Surinder, Baggs, Elizabeth M., Millard, Peter, Murrell, J. Colin and Singh, Brajesh K. (2011) Response of methanotrophic communities to afforestation and reforestation in New Zealand. The ISME Journal, 5 (11). pp. 1832-1836. ISSN 1751-7362

Rahman, Md Tanvir, Crombie, Andrew, Chen, Yin, Stralis-Pavese, Nancy, Bodrossy, Levente, Meir, Patrick, McNamara, Niall P. and Murrell, J. Colin (2011) Environmental distribution and abundance of the facultative methanotroph Methylocella. The ISME Journal, 5 (6). pp. 1061-1066. ISSN 1751-7362

Smith, TJ and Murrell, JC (2011) Genetic mutagenesis of soluble methane monooxygenase. In: Methods in Enzymology 495 (Methods in Methane Metabolism). Elsevier, pp. 135-147.

Smith, TJ and Murrell, JC (2011) Methanotrophs. In: Encyclopaedia of Industrial Biotechnology, Bioprocess, Bioseparation and Cell Technology. Wiley, pp. 1-13.

Stein, Lisa Y., Yoon, Sukhwan, Semrau, Jeremy D., DiSpirito, Alan A., Crombie, Andrew, Murrell, J. Colin, Vuilleumier, Stéphane, Kalyuzhnaya, Marina G., op den Camp, Huub J. M., Bringel, Françoise, Bruce, D., Cheng, J.-F., Copeland, A., Goodwin, Lynne, Han, Shunsheng, Hauser, Loren, Jetten, Mike S. M., Lajus, Aurélie, Land, M. L., Lapidus, A., Lucas, S., Médigue, Claudine, Pitluck, S., Woyke, Tanja, Zeytun, Ahmet and Klotz, Martin G. (2010) Genome sequence of the obligate methanotroph Methylosinus trichosporium strain OB3b. Journal of Bacteriology, 192 (24). pp. 6497-6498. ISSN 0021-9193

Krentz, Benjamin D., Mulheron, Heidi J., Semrau, Jeremy D., DiSpirito, Alan A., Bandow, Nathan L., Haft, Daniel H., Vuilleumier, Stéphane, Murrell, J. Colin, McEllistrem, Marcus T., Hartsel, Scott C. and Gallagher, Warren H. (2010) A comparison of methanobactins from Methylosinus trichosporium OB3b and Methylocystis strain SB2 predicts methanobactins are synthesized from diverse peptide precursors modified to create a common core for binding and reducing copper ions. Biochemistry, 49 (47). pp. 10117-10130. ISSN 0006-2960

Boden, Rich, Kelly, Donovan P., Murrell, J. Colin and Schaefer, Hendrik (2010) Oxidation of dimethylsulfide to tetrathionate by Methylophaga thiooxidams: a new link in the sulphur cycle. Environmental Microbiology, 12 (10). pp. 2688-2699. ISSN 1462-2920

Tamas, Ivica, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Murrell, J. Colin and Dunfield, Peter F. (2010) Complete Genome Sequence of Beijerinckia indica subsp. indica. Journal of Bacteriology, 192 (17). pp. 4532-4533. ISSN 0021-9193

Chen, Yin, Crombie, Andrew, Rahman, M. Tanvir, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Theisen, Andreas R., Murrell, J. Colin and Dunfield, Peter F. (2010) Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2. Journal of Bacteriology, 192 (14). pp. 3840-3841. ISSN 0021-9193

Chen, Yin, Scanlan, Julie, Song, Lijiang, Crombie, Andrew, Rahman, M. Tanvir, Schafer, Hendrik and Murrell, J. Colin (2010) y-Glutamylmethylamide is an essential intermediate in the metabolism of methylamine by Methylocella silvestris. Applied and Environmental Microbiology, 76 (13). pp. 4530-4537. ISSN 0099-2240

Chen, Yin and Murrell, J. Colin (2010) When metagenomics meets stable-isotope probing: progress and perspectives. Trends in Microbiology, 18 (4). pp. 157-163. ISSN 1878-4380

Antony, Chakkiath Paul, Kumaresan, Deepak, Ferrando, Lucia, Boden, Rich, Moussard, Hélène, Scavino, Ana Fernández, Shouche, Yogesh S. and Murrell, J. Colin (2010) Active methylotrophs in the sediments of Lonar Lake, a saline and alkaline ecosystem formed by meteor impact. The ISME Journal, 4 (11). pp. 1470-1480. ISSN 1751-7362

Chen, Y, Vorha, J and Murrell, JC (2010) Applications of DNA stable isotope probing in bioremediation studies. In: Methods in Molecular Microbiology. Humana Press Inc, NJ, USA, pp. 129-139.

Chen, Yin, McAleer, Kathryn L. and Murrell, J. Colin (2010) Monomethylamine as a nitrogen source for a nonmethylotrophic bacterium, Agrobacterium tumefaciens. Applied and Environmental Microbiology, 76 (12). pp. 4102-4104. ISSN 0099-2240

Chen, Yin and Murrell, J. Colin (2010) Methanotrophs and moss. Nature Geoscience, 3. pp. 595-596. ISSN 1752-0908

Cunliffe, Michael and Murrell, J. Colin (2010) Eukarya 18S rRNA gene diversity in the sea surface microlayer: implications for the structure of the neustonic microbial loop. The ISME Journal, 4 (3). pp. 455-458. ISSN 1751-7362

Jiang, Hao, Chen, Yin, Jiang, Peixia, Zhang, Chong, Smith, Thomas J., Murrell, J. Colin and Xing, Xin-Hui (2010) Methanotrophs: Multifunctional bacteria with promising applications in environmental bioengineering. Biochemical Engineering Journal, 49 (3). pp. 277-288.

Scanlan, Julie, Dumont, Marc G. and Murrell, J. Colin (2009) Involvement of MmoR and MmoG in the transcriptional activation of soluble methane monooxygenase genes in Methylosinus trichosporium OB3b. FEMS Microbiology Letters, 301 (2). pp. 181-187. ISSN 1574-6968

Cunliffe, Michael, Whiteley, Andrew S., Newbold, Lindsay, Oliver, Anna, Schafer, Hendrik and Murrell, J. Colin (2009) Comparison of bacterioneuston and bacterioplankton dynamics during a phytoplankton bloom in a fjord mesocosm. Applied and Environmental Microbiology, 75 (22). pp. 7173-7181. ISSN 0099-2240

Han, Bing, Chen, Yin, Abell, Guy, Jiang, Hao, Bodrossy, Levente, Zhao, Jiangang, Murrell, J. Colin and Xing, Xin-Hui (2009) Diversity and activity of methanotrophs in alkaline soil from a Chinese coal mine. FEMS Microbiology Ecology, 70 (2). pp. 196-207. ISSN 1574-6941

Moussard, Hélène, Stralis-Pavese, Nancy, Bodrossy, Levente, Neufeld, Josh D. and Murrell, J. Colin (2009) Identification of active methylotrophic bacteria inhabiting surface sediment of a marine estuary. Environmental Microbiology Reports, 1 (5). pp. 424-433. ISSN 1758-2229

Patel, Vibhuti J., Thalassinos, Konstantinos, Slade, Susan E., Connolly, Joanna B., Crombie, Andrew, Murrell, J. Colin and Scrivens, James H. (2009) A comparison of labeling and label-free mass spectrometry-based proteomics approaches. Journal of Proteome Research, 8 (7). pp. 3752-3759. ISSN 1535-3893

Degelmann, Daniela M., Kolb, Steffen, Dumont, Marc, Murrell, J. Colin and Drake, Harold L. (2009) Enterobacteriaceae facilitate the anaerobic degradation of glucose by a forest soil. FEMS Microbiology Ecology, 68 (3). pp. 312-319. ISSN 1574-6941

Ali, Hanif and Murrell, J. Colin (2009) Development and validation of promoter-probe vectors for the study of methane monooxygenase gene expression in Methylococcus capsulatus Bath. Microbiology, 155 (3). pp. 761-771. ISSN 1350-0872

Murrell, JC and Smith, TJ (2009) Microbial biotechnology meets environmental microbiology. Microbial Biotechnology, 2 (2). pp. 142-143.

Bengtson, Per, Basiliko, Nathan, Dumont, Marc G., Hills, Melissa, Murrell, J. Colin, Grayston, Sue J. and Roy, Réal (2009) Links between methanotroph community composition and CH4 oxidation in a pine forest soil. FEMS Microbiology Ecology, 70 (3). pp. 356-366. ISSN 1574-6941

Chen, Y and Murrell, JC (2009) Ecology of aerobic methane oxidising bacteria. In: Handbook of Hydrocarbon and Lipid Microbiology. Springer, Heidelberg, Germany, pp. 3068-3076.

Chen, Yin, Wu, Liqin, Boden, Rich, Hillebrand, Alexandra, Kumaresan, Deepak, Moussard, Hélène, Baciu, Mihai, Lu, Yahai and Murrell, J. Colin (2009) Life without light: microbial diversity and evidence of sulfur- and ammonium-based chemolithotrophy in Movile Cave. The ISME Journal, 3 (9). pp. 1093-1104. ISSN 1751-7362

Cunliffe, Michael, Harrison, Emma, Salter, Matthew, Schäfer, Hendrik, Upstill-Goddard, Robert C. and Murrell, J. Colin (2009) Comparison and validation of sampling strategies for the molecular microbial analysis of surface microlayers. Aquatic Microbial Ecology, 57. pp. 69-77. ISSN 0948-3055

Cunliffe, Michael and Murrell, J. Colin (2009) The sea-surface microlayer is a gelatinous biofilm. The ISME Journal, 3 (9). pp. 1001-1003. ISSN 1751-7362

Cunliffe, Michael, Salter, Matthew, Mann, Paul J., Whiteley, Andrew S., Upstill-Goddard, Robert C. and Murrell, J. Colin (2009) Dissolved organic carbon and bacterial populations in the gelatinous surface microlayer of a Norwegian fjord mesocosm. FEMS Microbiology Letters, 299 (2). pp. 248-254. ISSN 1574-6968

Han, Bing, Su, Tao, Wu, Hao, Gou, Zhongxuan, Xing, Xin-Hui, Jiang, Hao, Chen, Yin, Li, Xin and Murrell, J. Colin (2009) Paraffin oil as a “methane vector” for rapid and high cell density cultivation of Methylosinus trichosporium OB3b. Applied Microbiology and Biotechnology, 83 (4). pp. 669-677. ISSN 0175-7598

Kumaresan, Deepak, Abell, Guy C. J., Bodrossy, Levente, Stralis-Pavese, Nancy and Murrell, J. Colin (2009) Spatial and temporal diversity of methanotrophs in a landfill cover soil are differentially related to soil abiotic factors. Environmental Microbiology Reports, 1 (5). pp. 398-407. ISSN 1758-2229

Murrell, J. Colin and Jetten, Mike S. M. (2009) The microbial methane cycle. Environmental Microbiology Reports, 1 (5). pp. 279-284. ISSN 1758-2229

Murrell, JC (2009) The aerobic methane oxidising bacteria (methanotrophs). In: Handbook of Hydrocarbon and Lipid Microbiology. Springer, Heidelberg, Germany, pp. 1954-1966.

Murrell, JC and Smith, TJ (2009) Biochemistry and molecular biology of methane monooxygenase. In: Handbook of Hydrocarbon and Lipid Microbiology. Springer, Heidelberg, Germany, pp. 1046-1055.

Murrell, JC (2009) Genomics of Methylococcus capsulatus (Bath). In: Handbook of Hydrocarbon and Lipid Microbiology. Springer, Heidelberg, Germany, pp. 1328-1333.

Singh, Brajesh K., Tate, Kevin R., Ross, Des J., Singh, Jagrati, Dando, John, Thomas, Nadine, Millard, Peter and Murrell, J. Colin (2009) Soil methane oxidation and methanotroph responses to afforestation of pastures with Pinus radiata stands. Soil Biology and Biochemistry, 41 (10). pp. 2196-2205.

Smith, TJ, Trotsenko, YA and Murrell, JC (2009) Physiology and biochemistry of the aerobic methane oxidising bacteria. In: Handbook of Hydrocarbon and Lipid Microbiology. Springer, Heidelgerg, Germany, pp. 768-779.

Vishwakarma, Pranjali, Dumont, M. G., Bodrossy, L., Stralis-Pavese, N., Murrell, J. C. and Dubey, S. K. (2009) Ecological and molecular analyses of the rhizospheric methanotroph community in tropical rice soil: effect of crop phenology and land use history. Current Science, 96 (8). pp. 1082-1089.

Neufeld, Josh D., Boden, Rich, Moussard, Hélène, Schafer, Hendrik and Murrell, J. Colin (2008) Substrate-specific clades of active marine methylotrophs associated with a phytoplankton bloom in a temperate coastal environment. Applied and Environmental Microbiology, 74 (23). pp. 7321-7328. ISSN 0099-2240

Jensen, Sigmund, Neufeld, Josh D., Birkeland, Nils-Kåre, Hovland, Martin and Murrell, John Colin (2008) Methane assimilation and trophic interactions with marine Methylomicrobium in deep-water coral reef sediment off the coast of Norway. FEMS Microbiology Ecology, 66 (2). pp. 320-330. ISSN 1574-6941

Chen, Yin, Dumont, Marc G., Neufeld, Josh D., Bodrossy, Levante, Stralis-Pavese, Nancy, McNamara, Niall P., Ostle, Nick, Briones, Maria J. I. and Murrell, J. Colin (2008) Revealing the uncultivated majority: combining DNA stable-isotope probing, multiple displacement amplification and metagenomic analyses of uncultivated Methylocystis in acidic peatlands. Environmental Microbiology, 10 (10). pp. 2609-2622. ISSN 1462-2920

Neufeld, Josh D., Chen, Yin, Dumont, Marc G. and Murrell, J. Colin (2008) Marine methylotrophs revealed by stable-isotope probing, multiple displacement amplification and metagenomics. Environmental Microbiology, 10 (6). pp. 1526-1535. ISSN 1462-2920

Murrell, JC, Semrau, JD and DiSpirito, AA (2008) In Memoriam: Professor Sir Howard Dalton, FRS (1944 – 2008). Trends in Microbiology, 16 (5). p. 189. ISSN 1878-4380

Semrau, Jeremy D., DiSpirito, Alan A. and Murrell, J. Colin (2008) Life in the extreme: thermoacidophilic methanotrophy. Trends in Microbiology, 16 (5). pp. 190-193. ISSN 1878-4380

McDonald, Ian R., Bodrossy, Levente, Chen, Yin and Murrell, J. Colin (2008) Molecular ecology techniques for the study of aerobic methanotrophs. Applied and Environmental Microbiology, 74 (5). pp. 1305-1315. ISSN 0099-2240

Chen, Yin, Dumont, Marc G., McNamara, Niall P., Chamberlain, Paul M., Bodrossy, Levente, Stralis-Pavese, Nancy and Murrell, J. Colin (2008) Diversity of the active methanotrophic community in acidic peatlands as assessed by mRNA and SIP-PLFA analyses. Environmental Microbiology, 10 (2). pp. 446-459. ISSN 1462-2912

Chen, Yin, McNamara, Niall P., Dumont, Marc G., Bodrossy, Levente, Stralis-Pavese, Nancy and Murrell, J. Colin (2008) The impact of burning and Calluna removal on below-ground methanotroph diversity and activity in a peatland soil. Applied Soil Ecology, 40 (2). pp. 291-298.

Cunliffe, Michael, Schäfer, Hendrik, Harrison, Emma, Cleave, Simon, Upstill-Goddard, Robert and Murrell, J. Colin (2008) Phylogenetic and functional gene analysis of the bacterial and archaeal communities associated with the surface microlayer of an estuary. The ISME Journal, 2 (7). pp. 776-789. ISSN 1751-7362

Hamberger, Alexandra, Horn, Marcus A., Dumont, Marc G., Murrell, J. Colin and Drake, Harold L. (2008) Anaerobic consumers of monosaccharides in a moderately acidic fen. Applied and Environmental Microbiology, 74 (10). pp. 3112-3120. ISSN 0099-2240

Héry, Marina, Singer, Andrew C., Kumaresan, Deepak, Bodrossy, Levente, Stralis-Pavese, Nancy, Prosser, Jim I., Thompson, Ian P. and Murrell, J. Colin (2008) Effect of earthworms on the community structure of active methanotrophic bacteria in a landfill cover soil. The ISME Journal, 2 (1). pp. 92-104. ISSN 1751-7362

Jensen, Sigmund, Neufeld, Josh D., Birkeland, Nils-Kåre, Hovland, Martin and Murrell, J. Colin (2008) Insight into the microbial community structure of a Norwegian deep-water coral reef environment. Deep Sea Research Part I: Oceanographic Research Papers, 55 (11). pp. 1554-1563. ISSN 1879-0119

Mustakhimov, Ildar I., Rozova, Olga N., Reshetnikov, Alexander S., Khmelenina, Valentina N., Murrell, J. Colin and Trotsenko, Yuri A. (2008) Characterization of the recombinant diaminobutyric acid acetyltransferase from Methylophaga thalassica and Methylophaga alcalica. FEMS Microbiology Letters, 283 (1). pp. 91-96. ISSN 1574-6968

Mühling, Martin, Woolven-Allen, John, Murrell, J. Colin and Joint, Ian (2008) Improved group-specific PCR primers for denaturing gradient gel electrophoresis analysis of the genetic diversity of complex microbial communities. The ISME Journal, 2 (4). pp. 379-392. ISSN 1751-7362

Reshetnikov, Alexander S., Rozova, Olga N., Khmelenina, Valentina N., Mustakhimov, Ildar I., Beschastny, Alexander P., Murrell, J. Colin and Trotsenko, Yuri A. (2008) Characterization of the pyrophosphate-dependent 6-phosphofructokinase from Methylococcus capsulatus Bath. FEMS Microbiology Letters, 288 (2). pp. 202-210. ISSN 1574-6968

Trotsenko, Yuri A. and Murrell, John Colin (2008) Metabolic aspects of aerobic obligate methanotrophy. Advances in Applied Microbiology, 63. pp. 183-229.

Borodina, Elena, Nichol, Tim, Dumont, Marc G., Smith, Thomas J. and Murrell, J. Colin (2007) Mutagenesis of the "leucine gate" to explore the basis of catalytic versatility in soluble methane monooxygenase. Applied and Environmental Microbiology, 73 (20). pp. 6460-6467. ISSN 0099-2240

Neufeld, Josh D, Vohra, Jyotsna, Dumont, Marc G, Lueders, Tillmann, Manefield, Mike, Friedrich, Michael W and Murrell, J Colin (2007) DNA stable-isotope probing. Nature Protocols, 2 (4). pp. 860-866.

Dumont, Marc G and Murrell, J Colin (2005) Stable isotope probing - linking microbial identity to function. Nature Reviews Microbiology, 3 (6). pp. 499-504. ISSN 1740-1526