Items where Author is "Bowater, Richard"

Article

Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 and Brázda, Václav (2023) Impacts of molecular structure on nucleic acid–protein interactions. International Journal of Molecular Sciences, 24 (1). ISSN 1661-6596

Brázda, Václav and Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 (2022) Special Issue "Impacts of Molecular Structure on Nucleic Acid-Protein Interactions". International Journal of Molecular Sciences, 24 (1). ISSN 1661-6596

Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Bohálová, Natália and Brázda, Václav (2022) Interaction of proteins with inverted repeats and cruciform structures in nucleic acids. International Journal of Molecular Sciences, 23 (11). ISSN 1661-6596

Brázda, Václav, Bohálová, Natália and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2022) New telomere to telomere assembly of human chromosome 8 reveals a previous underestimation of G-quadruplex forming sequences and inverted repeats. Gene, 810. ISSN 0378-1119

Huynh, Thao Phuong Ngoc, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Bernuzzi, Federico, Saha, Shikha and Wormstone, I. Michael ORCID: https://orcid.org/0000-0002-6423-7766 (2021) GSH levels serve as a biological redox switch regulating sulforaphane-induced cell fate in human lens cells. Investigative Ophthalmology and Visual Science, 62 (15). ISSN 0146-0404

Brázda, Václav, Bartas, Martin and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2021) Evolution of diverse strategies for promoter regulation. Trends in Genetics, 37 (8). pp. 730-744. ISSN 0168-9525

Brazda, Vaclav, Fojta, Miroslav and Bowater, Richard P ORCID: https://orcid.org/0000-0002-2745-7807 (2020) Structures and stability of simple DNA repeats from bacteria. Biochemical Journal, 477 (2). pp. 325-339. ISSN 0264-6021

Liu, Peng, Wang, Wei, Tang, Jonathan C. Y. ORCID: https://orcid.org/0000-0001-6305-6333, Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 and Bao, Yongping ORCID: https://orcid.org/0000-0002-6425-0370 (2019) Antioxidant effects of sulforaphane in human HepG2 cells and immortalised hepatocytes. Food and Chemical Toxicology, 128. pp. 129-136. ISSN 0278-6915

Helma, Robert, Bažantová, Pavla, Petr, Marek, Adámik, Matej, Renčiuk, Daniel, Tichý, Vlastimil, Pastuchová, Alena, Soldánová, Zuzana, Pečinka, Petr, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Fojta, Miroslav and Brázdová, Marie (2019) P53 binds preferentially to non-B DNA structures formed by the pyrimidine-rich strands of GaA·TTC trinucleotide repeats associated with Friedreich’s ataxia. Molecules, 24 (11). ISSN 1420-3049

Hermanová, Monika, Havranová-Vidláková, Pavlína, Ondráčková, Anna, Kumar, Swathi Senthil, Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 and Fojta, Miroslav (2019) Label-free voltammetric detection of products of terminal deoxynucleotidyl transferase tailing reaction. Electroanalysis, 31 (2). pp. 246-255. ISSN 1040-0397

Labuda, Ján, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Fojta, Miroslav, Gauglitz, Günter, Glatz, Zdeněk, Hapala, Ivan, Havliš, Jan, Kilar, Ferenc, Kilar, Aniko, Malinovská, Lenka, Sirén, Heli M. M., Skládal, Petr, Torta, Federico, Valachovič, Martin, Wimmerová, Michaela, Zdráhal, Zbyněk and Hibbert, David Brynn (2018) Terminology of bioanalytical methods (IUPAC Recommendations 2018). Pure and Applied Chemistry, 90 (7). pp. 1121-1198. ISSN 0033-4545

Liu, Peng, Wang, Wei, Zhou, Zhigang, Smith, Andrew, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Wormstone, Ian Michael ORCID: https://orcid.org/0000-0002-6423-7766, Chen, Yuqiong and Bao, Yongping ORCID: https://orcid.org/0000-0002-6425-0370 (2018) Chemopreventive activities of sulforaphane and its metabolites in human hepatoma HepG2 cells. Nutrients, 10 (5). ISSN 2072-6643

Liu, Hanruo, Smith, Andrew J. O., Ball, Simon S. R., Bao, Yongping ORCID: https://orcid.org/0000-0002-6425-0370, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Wang, Ningli and Wormstone, I. Michael ORCID: https://orcid.org/0000-0002-6423-7766 (2017) Sulforaphane promotes ER stress, autophagy and cell death: implications for cataract surgery. Journal of Molecular Medicine, 95 (5). 553–564. ISSN 0946-2716

Cobb, Andrew M., Larrieu, Delphine, Warren, Derek, Liu, Yiwen, Srivastava, Sonal, Smith, Andrew J.O., Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Jackson, Stephen P. and Shanahan, Catherine M. (2016) Prelamin A impairs 53BP1 nuclear entry by mislocalizing NUP153 and disrupting the Ran gradient. Aging Cell, 15 (6). 1039–1050. ISSN 1474-9718

Pergolizzi, Giulia, Wagner, Gerd K. and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2016) Biochemical and structural characterization of DNA ligases from bacteria and archaea. Bioscience Reports, 36 (5). ISSN 0144-8463

Cotton, Cath, Bowater, Laura and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2016) Microbiology survey shows authors have most to gain from peer review. FEMS Microbiology Letters, 363 (18). ISSN 0378-1097

Smith, Andrew, Ball, Simon, Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 and Wormstone, Ian ORCID: https://orcid.org/0000-0002-6423-7766 (2016) PARP-1 inhibition influences the oxidative stress response of the human lens. Redox Biology, 8. pp. 354-362. ISSN 2213-2317

Smith, Andrew John Oliver, Ball, Simon Sidney Robert, Manzar, Kamal, Bowater, Richard Peter ORCID: https://orcid.org/0000-0002-2745-7807 and Wormstone, Ian Michael ORCID: https://orcid.org/0000-0002-6423-7766 (2015) Ku80 counters oxidative stress-induced DNA damage and cataract formation in the human lens. Investigative Ophthalmology and Visual Science, 56 (13). pp. 7868-7874. ISSN 0146-0404

Kelwick, Richard, Bowater, Laura, Yeoman, Kay H. and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2015) Promoting microbiology education through the iGEM Synthetic Biology Competition. FEMS Microbiology Letters, 362 (16). ISSN 0378-1097

Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 (2015) Supercoiled DNA: Structure. eLS.

Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807, Cobb, Andrew, Pivonkova, Hana, Havran, Ludek and Fojta, Miroslav (2015) Biophysical and electrochemical studies of protein-nucleic acid interactions. Monatshefte für Chemie - Chemical Monthly, 146 (5). pp. 723-739. ISSN 0026-9247

Bowater, Richard P ORCID: https://orcid.org/0000-0002-2745-7807 and Gates, Andrew James ORCID: https://orcid.org/0000-0002-4594-5038 (2015) Nucleotides: Structure and Properties. eLS.

Pergolizzi, Giulia, Cominetti, Marco, Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226, Field, Robert A. ORCID: https://orcid.org/0000-0001-8574-0275, Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 and Wagner, Gerd K. (2015) Base-modified NAD and AMP derivatives and their activity against bacterial DNA ligases. Organic & Biomolecular Chemistry, 13. pp. 6380-6398. ISSN 1477-0520

Stejskalová, Eva, Horáková, Petra, Vacek, Jan, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 and Fojta, Miroslav (2014) Enzyme-linked electrochemical DNA ligation assay using magnetic beads. Analytical and Bioanalytical Chemistry, 406 (17). pp. 4129-4136. ISSN 1618-2642

Cobb, Andrew M., Jackson, Brian R., Kim, Ella, Bond, Philip L. and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2013) Sequence-specific and DNA structure-dependent interactions of Escherichia coli MutS and human p53 with DNA. Analytical Biochemistry, 442 (1). pp. 51-61. ISSN 0003-2697

Liu, Hanruo, Smith, Andrew J. O., Lott, Martin C., Bao, Yongping ORCID: https://orcid.org/0000-0002-6425-0370, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Reddan, John R. and Wormstone, Ian Michael ORCID: https://orcid.org/0000-0002-6423-7766 (2013) Sulforaphane can protect lens cells against oxidative stress: Implications for cataract prevention. Investigative Ophthalmology & Visual Science, 54 (8). pp. 5236-5248. ISSN 0146-0404

Wang, Lixin, Eldred, Julie A, Sidaway, Peter, Sanderson, Julie, Smith, Andrew J. O., Bowater, Richard P ORCID: https://orcid.org/0000-0002-2745-7807, Reddan, John R and Wormstone, I Michael ORCID: https://orcid.org/0000-0002-6423-7766 (2012) Sigma 1 receptor stimulation protects against oxidative damage through suppression of the ER stress responses in the human lens. Mechanisms of Ageing and Development, 133 (11-12). pp. 665-674. ISSN 0047-6374

Howell, Lesley A., Bowater, Richard A. ORCID: https://orcid.org/0000-0002-2745-7807, O'Connell, Maria A. ORCID: https://orcid.org/0000-0002-0267-0951, Reszka, Anthony P., Neidle, Stephen and Searcey, Mark ORCID: https://orcid.org/0000-0003-2273-8949 (2012) Synthesis of small molecules targeting multiple DNA structures using click chemistry. ChemMedChem, 7 (5). pp. 792-804. ISSN 1860-7179

Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Wood, Ian C. and Luisi, Ben F. (2012) From beads on a string to the pearls of regulation: The structure and dynamics of chromatin. Biochemical Society Transactions, 40 (2). pp. 331-334. ISSN 0300-5127

Bowater, Laura, Cornea, Christine and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2012) Visualizing Science Fiction and relating it to Science Fact. The Biochemist, 34 (6). pp. 4-8. ISSN 0954-982X

Bowater, Laura, Cornea, Christine, James, Helen and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2012) Using science fiction to teach science facts. The Biochemist, 34 (6). pp. 15-20. ISSN 0954-982X

Bowater, Laura and Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 and Society for General Microbiology (2011) Survival of the Fittest. Microbiology Today, 38 (2). pp. 126-127.

Reddy, Kaalak, Tam, Mandy, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Barber, Miriam, Tomlinson, Matthew, Nichol Edamura, Kerrie, Wang, Yuh-Hwa and Pearson, Christopher E. (2011) Determinants of R-loop formation at convergent bidirectionally transcribed trinucleotide repeats. Nucleic Acids Research, 39 (5). pp. 1749-1762. ISSN 0305-1048

Howell, Lesley A., Waller, Zoe A. E., Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807, O'Connell, Maria ORCID: https://orcid.org/0000-0002-0267-0951 and Searcey, Mark ORCID: https://orcid.org/0000-0003-2273-8949 (2011) A small molecule that induces assembly of a four way DNA junction at low temperature. Chemical Communications, 47 (29). pp. 8262-8264. ISSN 1359-7345

Pergolizzi, Giulia, Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 and Wagner, Gerd K. (2011) A novel fluorescent probe for NAD-consuming enzymes. Chemical Communications, 47 (47). pp. 12655-12657. ISSN 1359-7345

Gorna, Alina E., Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 and Dziadek, Jaroslaw (2010) DNA repair systems and the pathogenesis of Mycobacterium tuberculosis: varying activities at different stages of infection. Clinical Science, 119 (5). pp. 187-202. ISSN 0143-5221

Stark, W. Marshall, Luisi, Ben F. and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2010) Machines on genes: Enzymes that make, break and move DNA and RNA. Biochemical Society Transactions, 38 (2). pp. 381-383. ISSN 0300-5127

Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Borts, Rhona H. and White, Malcolm F. (2009) DNA damage: From causes to cures. Biochemical Society Transactions, 37 (3). pp. 479-481. ISSN 1470-8752

Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Davies, R. Jeremy H., Palecek, Emil and Fojta, Miroslav (2009) Sensitive electrochemical assays of DNA structure. Chemistry Today, 27 (2). pp. 50-54.

Vacek, Jan, Cahova, Katerina, Palecek, Emil, Bullard, Desmond R., Lavesa-Curto, Manuel, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 and Fojta, Miroslav (2008) Label-free electrochemical monitoring of DNA ligase activity. Analytical Chemistry, 80 (19). pp. 7609-7613.

Korycka-Machala, Malgorzata, Rychta, Ewelina, Brzostek, Anna, Sayer, Heather R., Rumijowska-Galewicz, Anna, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 and Dziadek, Jarosław (2007) Evaluation of NAD(+)-dependent DNA ligase of mycobacteria as a potential target for antibiotics. Antimicrobial Agents and Chemotherapy, 51 (8). pp. 2888-2897. ISSN 1098-6596

Jackson, Brian R., Noble, Catherine, Lavesa-Curto, Manuel, Bond, Philip L. and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2007) Characterization of an ATP-dependent DNA ligase from the acidophilic archaeon "Ferroplasma acidarmanus" Fer1. Extremophiles, 11 (2). pp. 315-327. ISSN 1431-0651

Majchrzak, Marta, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Staczek, Pawel and Parniewski, Pawel (2006) SOS repair and DNA supercoiling influence the genetic stability of DNA triplet repeats in Escherichia coli. Journal of Molecular Biology, 364 (4). pp. 612-624. ISSN 1089-8638

Scott, Benjamin O. S., Lavesa-Curto, Manuel, Bullard, Desmond R., Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226 and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2006) Immobilized DNA hairpins for assay of sequential breaking and joining of DNA backbones. Analytical Biochemistry, 358 (1). pp. 90-98. ISSN 1096-0309

Bullard, Desmond R. and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2006) Direct comparison of nick-joining activity of the nucleic acid ligases from bacteriophage T4. Biochemical Journal, 398 (1). pp. 135-144. ISSN 0264-6021

Korycka-Machala, Malgorzata, Brzostek, Anna, Rozalska, Sylwia, Rumijowska-Galewicz, Anna, Dziedzic, Renata, Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 and Dziadek, Jaroslaw (2006) Distinct DNA repair pathways involving RecA and nonhomologous end joining in Mycobacterium smegmatis. FEMS Microbiology Letters, 258 (1). pp. 83-91. ISSN 1574-6968

Bowater, R ORCID: https://orcid.org/0000-0002-2745-7807 and Doherty, Aidan J. (2006) Making ends meet: repairing breaks in bacterial DNA by non-homologous end-joining. PLoS Genetics, 2 (2). ISSN 1553-7404

Walter, Korden, Warnecke, Gabriele, Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807, Deppert, Wolfgang and Kim, Ella (2005) Tumor suppressor p53 binds with high affinity to CTG-CAG trinucleotide repeats and induces topological alterations in mismatched duplexes. Journal of Biological Chemistry, 280 (52). pp. 42497-42507. ISSN 1083-351X

Wilkinson, Adam, Smith, Andrew, Bullard, Desmond, Lavesa-Curto, Manuel, Sayer, Heather, Bonner, Alexandra, Hemmings, Andrew ORCID: https://orcid.org/0000-0003-3053-3134 and Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 (2005) Analysis of ligation and DNA binding by Escherichia coli DNA ligase (LigA). Biochimica et Biophysica Acta - Proteins and Proteomics, 1749 (1). pp. 113-122. ISSN 1570-9639

Bowater, Richard Peter ORCID: https://orcid.org/0000-0002-2745-7807 (2005) Supercoiled DNA: Structure. eLS.

Bowater, RP ORCID: https://orcid.org/0000-0002-2745-7807 (2005) Nucleotides: Structure and Properties. Encyclopedia of Life Sciences.

Zauner, Gerhild, Wang, Yating, Lavesa-Curto, Manuel, MacDonald, Andrew, Mayes, Andrew G., Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 and Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226 (2005) Tethered DNA hairpins facilitate electrochemical detection of DNA ligation. The Analyst, 130 (3). pp. 345-349. ISSN 0003-2654

Lavesa-Curto, Manuel, Sayer, Heather, Bullard, Desmond, MacDonald, Andrew, Wilkinson, Adam, Smith, Andrew, Bowater, Laura, Hemmings, Andrew ORCID: https://orcid.org/0000-0003-3053-3134 and Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2004) Characterization of a temperature-sensitive DNA ligase from Escherichia coli. Microbiology, 150. pp. 4171-4180. ISSN 1465-2080

Sakowicz, Tomasz, Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 and Parniewski, Pawel (2004) Isolation, cloning and characterisation of motifs containing (GA/TC)n rpeeats from vetch, Vicia bithynica. Cellular and Molecular Biology Letters, 9. pp. 557-566. ISSN 1689-1392

Wilkinson, Adam, Sayer, Heather, Bullard, Desmond, Smith, Andrew, Day, Jonathan, Kieser, Tobias and Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 (2003) NAD+-dependent DNA ligases of Mycobacterium tuberculosis and Streptomyces coelicolor. Proteins: Structure Function and Bioinformatics, 51 (3). pp. 321-326. ISSN 0887-3585

Weller, Geoffrey R., Kysela, Boris, Roy, Rajat, Tonkin, Louise M., Scanlan, Elizabeth, Della, Marina, Krogh Devine, Susanne, Day, Jonathan P., Wilkinson, Adam, d'Adda di Fagagna, Fabrizio, Devine, Kevin M., Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Jeggo, Penny A., Jackson, Stephen P. and Doherty, Aidan J. (2002) Identification of a DNA non-homologous end-joining complex in bacteria. Science, 297 (5587). pp. 1686-1689. ISSN 1095-9203

Wilkinson, A, Day, J and Bowater, R ORCID: https://orcid.org/0000-0002-2745-7807 (2001) Bacterial DNA ligases. Molecular Microbiology, 40 (6). pp. 1241-1248. ISSN 1365-2958

Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 and Wells, Robert D. (2001) Intrinsically unstable life of DNA triplet repeats associated with human hereditary disorders. Progress in Nucleic Acid Research and Molecular Biology, 66. pp. 159-202.

Book Section

Labuda, Ján, Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807, Fojta, Miroslav, Gauglitz, Günter, Glatz, Zdeněk, Hapala, Ivan, Havliš, Jan, Kilar, Ferenc, Kilar, Aniko, Malinovská, Lenka, Sirén, Heli M. M., Skládal, Petr, Torta, Federico, Valachovič, Martin, Wimmerová, Michaela, Zdráhal, Zbyněk and Hibbert, David Brynn (2023) Bioanalytical Chemistry. In: Compendium of Terminology in Analytical Chemistry. Royal Society of Chemistry, pp. 512-568. ISBN 978-1-78262-947-4

Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 (2003) DNA structure. In: Encyclopedia of Human Genetics. Wiley.

Book

Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807, Bowater, Laura and Husband, Tom (2020) Biochemistry: The molecules of life. Oxford Biology Primers . Oxford University Press. ISBN 9780198848394

Other

Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 (2022) DNA Structure and Replication. MASSOLIT.

Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 and Waller, Zoe (2014) DNA Structure. Wiley, http://www.els.net/.