Items where Author is "Mock, Thomas"

Article

Flynn, Kevin J., Atkinson, Angus, Beardall, John, Berges, John A., Boersma, Maarten, Brunet, Christophe, Calbet, Albert, Caron, Dave A., Dam, Hans G., Glibert, Patricia M., Hansen, Per Juel, Jin, Peng, Lønborg, Christian, Mayor, Daniel J., Menden-Deuer, Susanne, Mock, Thomas, Mulholland, Margaret R., Needham, David M., Polimene, Luca, Poulton, Alex J., Robinson, Carol, Rokitta, Sebastian D., Rost, Björn, Saiz, Enric, Scanlan, David J., Schmidt, Katrin, Sherr, Evelyn, Stoecker, Diane K., Svensen, Camilla, Thiele, Stefan, Thingstad, Tron F. and Våge, Selina (2025) More realistic plankton simulation models will improve projections of ocean ecosystem responses to global change. Nature Ecology and Evolution. ISSN 2397-334X

Li, Yixuan, Deng, Longji, Walker, Emma Jane Lougheed, Karas, Bogumil J. and Mock, Thomas (2025) Genetic engineering in diatoms: Advances and prospects. The Plant Journal, 121 (6). ISSN 0960-7412

Boulton, William, Salamov, Asaf, Grigoriev, Igor V., Calhoun, Sara, LaButti, Kurt, Riley, Robert, Barry, Kerrie, Fong, Allison A., Hoppe, Clara J. M., Metfies, Katja, Oetjen, Kersten, Eggers, Sarah Lena, Müller, Oliver, Gardner, Jessie, Granskog, Mats A., Torstensson, Anders, Oggier, Marc, Larsen, Aud, Bratbak, Gunnar, Toseland, Andrew, Leggett, Richard M., Moulton, Vincent and Mock, Thomas (2025) Metagenome-assembled-genomes recovered from the Arctic drift expedition MOSAiC. Scientific Data, 12. ISSN 2052-4463

White, Oliver W., Walkington, Sarah, Carter, Hugh, Hughes, Lauren, Clark, Melody, Mock, Thomas, Tarling, Geraint A. and Clark, Matthew D. (2024) Exome capture of Antarctic krill (Euphausia superba) for cost effective genotyping and population genetics with historical collections. Molecular Ecology Resources, 24 (8). ISSN 1755-098X

Singh, Amit Kumar, Nawkarkar, Prachi, Bhatnagar, Vipul Swarup, Tripathi, Shweta, Mock, Thomas and Kumar, Shashi (2024) Assessing the potential of a genetically modified Parachlorella kessleri-I with low CO2 inducible proteins for enhanced biomass and biofuel productivity. Journal of Environmental Chemical Engineering, 12 (5). ISSN 2213-3437

Chen, Jianwei, Jia, Yangyang, Sun, Ying, Liu, Kun, Zhou, Changhao, Liu, Chuan, Li, Denghui, Liu, Guilin, Zhang, Chengsong, Yang, Tao, Huang, Lei, Zhuang, Yunyun, Wang, Dazhi, Xu, Dayou, Zhong, Qiaoling, Guo, Yang, Li, Anduo, Seim, Inge, Jiang, Ling, Wang, Lushan, Lee, Simon Ming Yuen, Liu, Yujing, Wang, Dantong, Zhang, Guoqiang, Liu, Shanshan, Wei, Xiaofeng, Yue, Zhen, Zheng, Shanmin, Shen, Xuechun, Wang, Sen, Qi, Chen, Chen, Jing, Ye, Chen, Zhao, Fang, Wang, Jun, Fan, Jie, Li, Baitao, Sun, Jiahui, Jia, Xiaodong, Xia, Zhangyong, Zhang, He, Liu, Junnian, Zheng, Yue, Liu, Xin, Wang, Jian, Yang, Huanming, Kristiansen, Karsten, Xu, Xun, Mock, Thomas, Li, Shengying, Zhang, Wenwei and Fan, Guangyi (2024) Global marine microbial diversity and its potential in bioprospecting. Nature, 633 (8029). pp. 371-379. ISSN 0028-0836

Fong, Allison A., Hoppe, Clara J. M., Aberle, Nicole, Ashjian, Carin J., Assmy, Philipp, Bai, Youcheng, Bakker, Dorothee C. E., Balmonte, John P., Barry, Kevin R., Bertilsson, Stefan, Boulton, William, Bowman, Jeff, Bozzato, Deborah, Bratbak, Gunnar, Buck, Moritz, Campbell, Robert G., Castellani, Giulia, Chamberlain, Emelia J., Chen, Jianfang, Chierici, Melissa, Cornils, Astrid, Creamean, Jessie M., Damm, Ellen, Dethloff, Klaus, Droste, Elise S., Ebenhöh, Oliver, Eggers, Sarah L., Engel, Anja, Flores, Hauke, Fransson, Agneta, Frickenhaus, Stephan, Gardner, Jessie, Gelfman, Cecilia E., Granskog, Mats A., Graeve, Martin, Havermans, Charlotte, Heuzé, Céline, Hildebrandt, Nicole, Hill, Thomas C. J., Hoppema, Mario, Immerz, Antonia, Jin, Haiyan, Koch, Boris P., Kong, Xianyu, Kraberg, Alexandra, Lan, Musheng, Lange, Benjamin A., Larsen, Aud, Lebreton, Benoit, Leu, Eva, Loose, Brice, Maslowski, Wieslaw, Mavis, Camille, Metfies, Katja, Mock, Thomas, Müller, Oliver, Nicolaus, Marcel, Niehoff, Barbara, Nomura, Daiki, Nöthig, Eva-Maria, Oggier, Marc, Oldenburg, Ellen, Olsen, Lasse Mork, Peeken, Ilka, Perovich, Donald, Popa, Ovidiu, Rabe, Benjamin, Ren, Jian, Rex, Markus, Rinke, Annette, Rokitta, Sebastian, Rost, Björn, Sakinan, Serdar, Salganik, Evgenii, Schaafsma, Fokje L., Schäfer, Hendrik, Schmidt, Katrin, Shoemaker, Katyanne M., Shupe, Matthew D., Snoeijs-Leijonmalm, Pauline, Stefels, Jacqueline, Svenson, Anders, Tao, Ran, Torres-Valdes, Sinhue, Torstensson, Anders, Toseland, Andrew, Ulfsbo, Adam, van Leeuwe, Maria A., Vortkamp, Martina, Webb, Alison L., Zhuang, Yanpei and Gradinger, Rolf R. and MOSAiC expedition: Ecoysystem (2024) Overview of the MOSAiC expedition: Ecosystem. Elementa: Science of the Anthropocene, 12 (1). ISSN 2325-1026

Wang, Guangning, Huang, Lu, Zhuang, Shanshan, Han, Fang, Huang, Qianqian, Hao, Mengyuan, Lin, Guifang, Chen, Longnan, Shen, Biying, Li, Feng, Li, Xuesong, Chen, Changping, Gao, Yahui, Mock, Thomas and Liang, Junrong (2024) Resting cell formation in the marine diatom Thalassiosira pseudonana. New Phytologist, 243 (4). pp. 1347-1360. ISSN 0028-646X

Jin, Haoyu, Zhang, Chao, Meng, Siyu, Wang, Qin, Ding, Xiaokun, Meng, Ling, Zhuang, Yunyun, Yao, Xiaohong, Gao, Yang, Shi, Feng, Mock, Thomas and Gao, Huiwang (2024) Atmospheric deposition and river runoff stimulate the utilization of dissolved organic phosphorus in coastal seas. Nature Communications, 15. ISSN 2041-1723

Clark, M. S., Hoffman, J. I., Peck, L. S., Bargelloni, L., Gande, D., Havermans, C., Meyer, B., Patarnello, T., Phillips, T., Stoof-leichsenring, K. R., Vendrami, D. L. J., Beck, A., Collins, G., Friedrich, M. W., Halanych, K. M., Masello, J. F., Nagel, R., Norén, K., Printzen, C., Ruiz, M. B., Wohlrab, S., Becker, B., Dumack, K., Ghaderiardakani, F., Glaser, K., Heesch, S., Held, C., John, U., Karsten, U., Kempf, S., Lucassen, M., Paijmans, A., Schimani, K., Wallberg, A., Wunder, L. C. and Mock, T. (2023) Multi-omics for studying and understanding polar life. Nature Communications, 14 (1). ISSN 2041-1723

Strauss, Jan, Deng, Longji, Gao, Shiqiang, Toseland, Andrew, Bachy, Charles, Zhang, Chong, Kirkham, Amy, Hopes, Amanda, Utting, Robert, Joest, Eike F., Tagliabue, Alessandro, Löw, Christian, Worden, Alexandra Z., Nagel, Georg and Mock, Thomas (2023) Plastid-localized xanthorhodopsin increases diatom biomass and ecosystem productivity in iron-limited surface oceans. Nature Microbiology, 8 (11). pp. 2050-2066. ISSN 2058-5276

Priest, Taylor, von Appen, Wilken-Jon, Oldenburg, Ellen, Popa, Ovidiu, Torres-Valdés, Sinhué, Bienhold, Christina, Metfies, Katja, Boulton, William, Mock, Thomas, Fuchs, Bernhard M., Amann, Rudolf, Boetius, Antje and Wietz, Matthias (2023) Atlantic water influx and sea-ice cover drive taxonomic and functional shifts in Arctic marine bacterial communities. ISME Journal, 17 (10). pp. 1612-1625. ISSN 1751-7362

Smith, Madison M., Angot, Hélène, Chamberlain, Emelia J., Droste, Elise S., Karam, Salar, Muilwijk, Morven, Webb, Alison L., Archer, Stephen D., Beck, Ivo, Blomquist, Byron W., Bowman, Jeff, Boyer, Matthew, Bozzato, Deborah, Chierici, Melissa, Creamean, Jessie, D'Angelo, Alessandra, Delille, Bruno, Fer, Ilker, Fong, Allison A., Fransson, Agneta, Fuchs, Niels, Gardner, Jessie, Granskog, Mats A., Hoppe, Clara J. M., Hoppema, Mario, Hoppmann, Mario, Mock, Thomas, Muller, Sofia, Müller, Oliver, Nicolaus, Marcel, Nomura, Daiki, Petäjä, Tuukka, Salganik, Evgenii, Schmale, Julia, Schmidt, Katrin, Schulz, Kirstin M., Shupe, Matthew D., Stefels, Jacqueline, Thielke, Linda, Tippenhauer, Sandra, Ulfsbo, Adam, van Leeuwe, Maria, Webster, Melinda, Yoshimura, Masaki and Zhan, Liyang (2023) Thin and transient meltwater layers and false bottoms in the Arctic sea ice pack—Recent insights on these historically overlooked features. Elementa: Science of the Anthropocene, 11 (1). ISSN 2325-1026

Pichler, Monica, Meindl, Andreas, Romberger, Markus, Eckes-Shephard, Annemarie, Nyberg-Brodda, Carl Fredrik, Buhigas, Claudia, Llaneza-Lago, Sergio, Lehmann, Gerhard, Hopes, Amanda, Meister, Gunter, Medenbach, Jan and Mock, Thomas (2023) Ribosome profiling in the model diatom Thalassiosira pseudonana. Current Protocols, 3 (7). ISSN 2691-1299

Belshaw, Nigel, Grouneva, Irina, Aram, Lior, Gal, Assaf, Hopes, Amanda and Mock, Thomas (2023) Efficient gene replacement by CRISPR/Cas-mediated homologous recombination in the model diatom Thalassiosira pseudonana. New Phytologist, 238 (1). pp. 438-452. ISSN 0028-646X

Duncan, Anthony, Barry, Kerrie, Daum, Chris, Eloe-Fadrosh, Emiley, Roux, Simon, Schmidt, Katrin, Tringe, Susannah G., Valentin, Klaus U., Varghese, Neha, Salamov, Asaf, Grigoriev, Igor V., Leggett, Richard M., Moulton, Vincent and Mock, Thomas (2023) Dataset of 143 metagenome-assembled genomes from the Arctic and Atlantic Oceans, including 21 for eukaryotic organisms. Data in Brief, 47. ISSN 2352-3409

Otte, Antonia, Winder, Johanna C., Deng, Longji, Schmutz, Jeremy, Jenkins, Jerry, Grigoriev, Igor V., Hopes, Amanda and Mock, Thomas (2023) The diatom Fragilariopsis cylindrus: A model alga to understand cold‐adapted life. Journal of Phycology, 59 (2). pp. 301-306. ISSN 0022-3646

Mock, Thomas (2023) Algal model species for advancing biological sciences. Journal of Phycology, 59 (1). pp. 1-3. ISSN 0022-3646

Winder, Johanna C., Boulton, William, Salamov, Asaf, Eggers, Sarah Lena, Metfies, Katja, Moulton, Vincent and Mock, Thomas (2023) Genetic and structural diversity of prokaryotic ice-binding proteins from the central Arctic Ocean. Genes, 14 (2). ISSN 2073-4425

Mock, Thomas, Boulton, William, Balmonte, John Paul, Barry, Kevin, Bertilsson, Stefan, Bowman, Jeff, Buck, Moritz, Bratbak, Gunnar, Chamberlain, Emelia J., Cunliffe, Michael, Creamean, Jessie, Ebenhöh, Oliver, Eggers, Sarah Lena, Fong, Allison A., Gardner, Jessie, Gradinger, Rolf, Granskog, Mats A., Havermans, Charlotte, Hill, Thomas, Hoppe, Clara J. M., Korte, Kerstin, Larsen, Aud, Müller, Oliver, Nicolaus, Anja, Oldenburg, Ellen, Popa, Ovidiu, Rogge, Swantje, Schäfer, Hendrik, Shoemaker, Katyanne, Snoeijs-Leijonmalm, Pauline, Torstensson, Anders, Valentin, Klaus, Vader, Anna, Barry, Kerrie, Chen, I.-M. A., Clum, Alicia, Copeland, Alex, Daum, Chris, Eloe-Fadrosh, Emiley, Foster, Brian, Foster, Bryce, Grigoriev, Igor V., Huntemann, Marcel, Ivanova, Natalia, Kuo, Alan, Kyrpides, Nikos C., Mukherjee, Supratim, Palaniappan, Krishnaveni, Reddy, T. B. K., Salamov, Asaf, Roux, Simon, Varghese, Neha, Woyke, Tanja, Wu, Dongying, Leggett, Richard M., Moulton, Vincent and Metfies, Katja (2022) Multiomics in the central Arctic Ocean for benchmarking biodiversity change. PLoS Biology, 20 (10). ISSN 1544-9173

Neri, Uri, Wolf, Yuri I., Roux, Simon, Camargo, Antonio Pedro, Lee, Benjamin, Kazlauskas, Darius, Chen, I. Min, Ivanova, Natalia, Zeigler Allen, Lisa, Paez-Espino, David, Bryant, Donald A., Bhaya, Devaki, Krupovic, Mart, Dolja, Valerian V., Kyrpides, Nikos C., Koonin, Eugene V., Gophna, Uri, Narrowe, Adrienne B., Probst, Alexander J., Sczyrba, Alexander, Kohler, Annegret, Séguin, Armand, Shade, Ashley, Campbell, Barbara J., Lindahl, Björn D., Reese, Brandi Kiel, Roque, Breanna M., Derito, Chris, Averill, Colin, Cullen, Daniel, Beck, David A. C., Walsh, David A., Ward, David M., Wu, Dongying, Eloe-Fadrosh, Emiley, Brodie, Eoin L., Young, Erica B., Lilleskov, Erik A., Castillo, Federico J., Martin, Francis M., Lecleir, Gary R., Attwood, Graeme T., Cadillo-Quiroz, Hinsby, Simon, Holly M., Hewson, Ian, Grigoriev, Igor V., Tiedje, James M., Jansson, Janet K., Lee, Janey, Vandergheynst, Jean S., Dangl, Jeff, Bowman, Jeff S., Blanchard, Jeffrey L., Bowen, Jennifer L., Xu, Jiangbing, Banfield, Jillian F., Deming, Jody W., Kostka, Joel E., Gladden, John M., Rapp, Josephine Z., Sharpe, Joshua, McMahon, Katherine D., Treseder, Kathleen K., Bidle, Kay D., Wrighton, Kelly C., Thamatrakoln, Kimberlee, Nusslein, Klaus, Meredith, Laura K., Ramirez, Lucia, Buee, Marc, Huntemann, Marcel, Kalyuzhnaya, Marina G., Waldrop, Mark P., Sullivan, Matthew B., Schrenk, Matthew O., Hess, Matthias, Vega, Michael A., O'Malley, Michelle A., Medina, Monica, Gilbert, Naomi E., Delherbe, Nathalie, Mason, Olivia U., Dijkstra, Paul, Chuckran, Peter F., Baldrian, Petr, Constant, Philippe, Stepanauskas, Ramunas, Daly, Rebecca A., Lamendella, Regina, Gruninger, Robert J., Mckay, Robert M., Hylander, Samuel, Lebeis, Sarah L., Esser, Sarah P., Acinas, Silvia G., Wilhelm, Steven S., Singer, Steven W., Tringe, Susannah S., Woyke, Tanja, Reddy, T. B. K., Bell, Terrence H., Mock, Thomas, McAllister, Tim, Thiel, Vera, Denef, Vincent J., Liu, Wen-Tso, Martens-Habbena, Willm, Allen Liu, Xiao-Jun, Cooper, Zachary S. and Wang, Zhong (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell, 185 (21). 4023-4037.e18. ISSN 0092-8674

Kleiner, Friedrich H., Helliwell, Katherine E., Chrachri, Abdul, Hopes, Amanda, Parry-Wilson, Hannah, Gaikwad, Trupti, Mieszkowska, Nova, Mock, Thomas, Wheeler, Glen L. and Brownlee, Colin (2022) Cold-induced [Ca2+]cyt elevations function to support osmoregulation in marine diatoms. Plant Physiology, 190 (2). pp. 1384-1399. ISSN 0032-0889

Ye, Naihao, Han, Wentao, Toseland, Andrew, Wang, Yitao, Fan, Xiao, Xu, Dong, van Oosterhout, Cock, Grigoriev, Igor V., Tagliabue, Alessandro, Zhang, Jian, Zhang, Yan, Ma, Jian, Qiu, Huan, Li, Youxun, Zhang, Xiaowen and Mock, Thomas and Sea of Change Consortium (2022) The role of zinc in the adaptive evolution of polar phytoplankton. Nature Ecology & Evolution, 6 (7). pp. 965-978. ISSN 2397-334X

Kamikawa, Ryoma, Mochizuki, Takako, Sakamoto, Mika, Tanizawa, Yasuhiro, Nakayama, Takuro, Onuma, Ryo, Cenci, Ugo, Moog, Daniel, Speak, Samuel, Sarkozi, Krisztina, Toseland, Andrew, van Oosterhout, Cock, Oyama, Kaori, Kato, Misako, Kume, Keitaro, Kayama, Motoki, Azuma, Tomonori, Ishii, Ken-ichiro, Miyashita, Hideaki, Henrissat, Bernard, Lombard, Vincent, Win, Joe, Kamoun, Sophien, Kashiyama, Yuichiro, Mayama, Shigeki, Miyagishima, Shin-ya, Tanifuji, Goro, Mock, Thomas and Nakamura, Yasukazu (2022) Genome evolution of a nonparasitic secondary heterotroph, the diatom Nitzschia putrida. Science Advances, 8 (17). ISSN 2375-2548

Duncan, Anthony, Barry, Kerrie, Daum, Chris, Eloe-Fadrosh, Emiley, Roux, Simon, Schmidt, Katrin, Tringe, Susannah G., Valentin, Klaus U., Varghese, Neha, Salamov, Asaf, Grigoriev, Igor V., Leggett, Richard M., Moulton, Vincent and Mock, Thomas (2022) Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans. Microbiome, 10. ISSN 2049-2618

Gilbertson, Reuben, Langan, Emma and Mock, Thomas (2022) Diatoms and their microbiomes in complex and changing polar oceans. Frontiers in Microbiology, 13. ISSN 1664-302X

Laundon, Davis, Chrismas, Nathan, Bird, Kimberley, Thomas, Seth, Mock, Thomas and Cunliffe, Michael (2022) A cellular and molecular atlas reveals the basis of chytrid development. eLife, 11. ISSN 2050-084X

Mao, Xuewei, Chen, Jianwei, van Oosterhout, Cock, Zhang, Huan, Liu, Guangxing, Zhuang, Yunyun and Mock, Thomas (2022) Diversity, prevalence, and expression of cyanase genes (cynS) in planktonic marine microorganisms. The ISME Journal, 16 (2). 602–605. ISSN 1751-7362

Tatman, Ben, Mock, Thomas, Wu, Taoyang and van Oosterhout, Cock (2021) Significance of differential allelic expression (DAE) in phenotypic plasticity and evolutionary potential of microbial eukaryotes. Quantitative Biology, 9 (4). pp. 400-410. ISSN 2095-4689

Martin, Kara, Schmidt, Katrin, Toseland, Andrew, Boulton, Chris A., Barry, Kerrie, Beszteri, Bánk, Brussaard, Corina P. D., Clum, Alicia, Daum, Chris G., Eloe-Fadrosh, Emiley, Fong, Allison, Foster, Brian, Foster, Bryce, Ginzburg, Michael, Huntemann, Marcel, Ivanova, Natalia N., Kyrpides, Nikos C., Lindquist, Erika, Mukherjee, Supratim, Palaniappan, Krishnaveni, Reddy, T. B. K., Rizkallah, Mariam R., Roux, Simon, Timmermans, Klaas, Tringe, Susannah G., Van De Poll, Willem H., Varghese, Neha, Valentin, Klaus U., Lenton, Timothy M., Grigoriev, Igor V., Leggett, Richard M., Moulton, Vincent and Mock, Thomas (2021) The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole. Nature Communications, 12 (1). ISSN 2041-1723

Graff Van Creveld, Shiri, Ben-Dor, Shifra, Mizrachi, Avia, Alcolombri, Uria, Hopes, Amanda, Mock, Thomas, Rosenwasser, Shilo and Vardi, Assaf (2021) Biochemical characterization of a novel redox-regulated metacaspase in a marine diatom. Frontiers in Microbiology, 12. ISSN 1664-302X

Mock, Thomas (2021) Silicon drives the evolution of complex crystal morphology in calcifying algae. New Phytologist, 231 (5). pp. 1663-1666. ISSN 0028-646X

Bulankova, Petra, Sekulić, Mirna, Jallet, Denis, Nef, Charlotte, van Oosterhout, Cock, Delmont, Tom O., Vercauteren, Ilse, Osuna-Cruz, Cristina Maria, Vancaester, Emmelien, Mock, Thomas, Sabbe, Koen, Daboussi, Fayza, Bowler, Chris, Vyverman, Wim, Vandepoele, Klaas and De Veylder, Lieven (2021) Mitotic recombination between homologous chromosomes drives genomic diversity in diatoms. Current Biology, 31 (15). 3221-3232.e9. ISSN 0960-9822

Laundon, Davis, Mock, Thomas, Wheeler, Glen and Cunliffe, Michael (2021) Healthy herds in the phytoplankton: the benefit of selective parasitism. The ISME Journal, 15 (7). 2163–2166. ISSN 1751-7362

Mock, Thomas and IMG/M Data Consortium (2021) A genomic catalog of Earth’s microbiomes. Nature Biotechnology, 39 (4). 499–509. ISSN 1087-0156

Teng, Linhong, Han, Wentao, Fan, Xiao, Zhang, Xiaowen, Xu, Dong, Wang, Yitao, Rahman, Sadequr, Pellegrini, Matteo, Mock, Thomas and Ye, Naihao (2021) Integrative analysis of chloroplast DNA methylation in a marine alga—Saccharina japonica. Plant Molecular Biology, 105 (6). 611–623. ISSN 0167-4412

Postel, Ute, Glemser, Barbara, Salazar Alekseyeva, Katherine, Eggers, Sarah Lena, Groth, Marco, Glöckner, Gernot, John, Uwe, Mock, Thomas, Klemm, Kerstin, Valentin, Klaus and Beszteri, Bánk (2020) Adaptive divergence across Southern Ocean gradients in the pelagic diatom Fragilariopsis kerguelensis. Molecular Ecology, 29 (24). pp. 4913-4924. ISSN 0962-1083

Gao, Simin, Smik, Lukas, Kulikovskiy, Maxim, Shkurina, Nataliya, Gusev, Evgeniy, Pedentchouk, Nikolai, Mock, Thomas and Belt, Simon T. (2020) A novel tri-unsaturated highly branched isoprenoid (HBI) alkene from the marine diatom Navicula salinicola. Organic Geochemistry, 146. ISSN 0146-6380

Osuna-Cruz, Cristina Maria, Bilcke, Gust, Vancaester, Emmelien, De Decker, Sam, Bones, Atle M., Winge, Per, Poulsen, Nicole, Bulankova, Petra, Verhelst, Bram, Audoor, Sien, Belisova, Darja, Pargana, Aikaterini, Russo, Monia, Stock, Frederike, Cirri, Emilio, Brembu, Tore, Pohnert, Georg, Piganeau, Gwenael, Ferrante, Maria Immacolata, Mock, Thomas, Sterck, Lieven, Sabbe, Koen, De Veylder, Lieven, Vyverman, Wim and Vandepoele, Klaas (2020) The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms. Nature Communications, 11. ISSN 2041-1723

Faktorová, Drahomíra, Nisbet, R. Ellen R., Fernández Robledo, José A., Casacuberta, Elena, Sudek, Lisa, Allen, Andrew E., Ares, Manuel, Aresté, Cristina, Balestreri, Cecilia, Barbrook, Adrian C., Beardslee, Patrick, Bender, Sara, Booth, David S., Bouget, François Yves, Bowler, Chris, Breglia, Susana A., Brownlee, Colin, Burger, Gertraud, Cerutti, Heriberto, Cesaroni, Rachele, Chiurillo, Miguel A., Clemente, Thomas, Coles, Duncan B., Collier, Jackie L., Cooney, Elizabeth C., Coyne, Kathryn, Docampo, Roberto, Dupont, Christopher L., Edgcomb, Virginia, Einarsson, Elin, Elustondo, Pía A., Federici, Fernan, Freire-Beneitez, Veronica, Freyria, Nastasia J., Fukuda, Kodai, García, Paulo A., Girguis, Peter R., Gomaa, Fatma, Gornik, Sebastian G., Guo, Jian, Hampl, Vladimír, Hanawa, Yutaka, Haro-Contreras, Esteban R., Hehenberger, Elisabeth, Highfield, Andrea, Hirakawa, Yoshihisa, Hopes, Amanda, Howe, Christopher J., Hu, Ian, Ibañez, Jorge, Irwin, Nicholas A.T., Ishii, Yuu, Janowicz, Natalia Ewa, Jones, Adam C., Kachale, Ambar, Fujimura-Kamada, Konomi, Kaur, Binnypreet, Kaye, Jonathan Z., Kazana, Eleanna, Keeling, Patrick J., King, Nicole, Klobutcher, Lawrence A., Lander, Noelia, Lassadi, Imen, Li, Zhuhong, Lin, Senjie, Lozano, Jean Claude, Luan, Fulei, Maruyama, Shinichiro, Matute, Tamara, Miceli, Cristina, Minagawa, Jun, Moosburner, Mark, Najle, Sebastián R., Nanjappa, Deepak, Nimmo, Isabel C., Noble, Luke, Novák Vanclová, Anna M.G., Nowacki, Mariusz, Nuñez, Isaac, Pain, Arnab, Piersanti, Angela, Pucciarelli, Sandra, Pyrih, Jan, Rest, Joshua S., Rius, Mariana, Robertson, Deborah, Ruaud, Albane, Ruiz-Trillo, Iñaki, Sigg, Monika A., Silver, Pamela A., Slamovits, Claudio H., Smith, G. Jason, Sprecher, Brittany N., Stern, Rowena, Swart, Estienne C., Tsaousis, Anastasios D., Tsypin, Lev, Turkewitz, Aaron, Turnšek, Jernej, Valach, Matus, Vergé, Valérie, von Dassow, Peter, von der Haar, Tobias, Waller, Ross F., Wang, Lu, Wen, Xiaoxue, Wheeler, Glen, Woods, April, Zhang, Huan, Mock, Thomas, Worden, Alexandra Z. and Lukeš, Julius (2020) Genetic tool development in marine protists: Emerging model organisms for experimental cell biology. Nature Methods, 17 (5). 481–494. ISSN 1548-7091

Falciatore, Angela, Jaubert, Marianne, Bouly, Jean-Pierre, Bailleul, Benjamin and Mock, Thomas (2020) Diatom molecular research comes of age: Model species for studying phytoplankton biology and diversity. The Plant Cell, 32 (3). 547–572. ISSN 1040-4651

Waldvogel, Ann-Marie, Feldmeyer, Barbara, Rolshausen, Gregor, Exposito-Alonso, Moises, Rellstab, Christian, Kofler, Robert, Mock, Thomas, Schmid, Karl, Schmitt, Imke, Bataillon, Thomas, Savolainen, Outi, Bergland, Alan, Flatt, Thomas, Guillaume, Frederic and Pfenninger, Markus (2020) Evolutionary genomics can improve prediction of species' responses to climate change. Evolution Letters, 4 (1). pp. 4-18. ISSN 2056-3744

Fan, Xiao, Han, Wentao, Teng, Linhong, Jiang, Peng, Zhang, Xiaowen, Xu, Dong, Li, Chang, Pellegrini, Matteo, Wu, Chunhui, Wang, Yitao, Kaczurowski, Michelle Joyce Slade, Lin, Xin, Tirichine, Leila, Mock, Thomas and Ye, Naihao (2020) Single-base methylome profiling of the giant kelp Saccharina japonica reveals significant differences in DNA methylation to microalgae and plants. New Phytologist, 225 (1). pp. 234-249. ISSN 0028-646X

Xu, Dong, Brennan, Georgina, Xu, Le, Zhang, Xiao W., Fan, Xiao, Han, Wen T., Mock, Thomas, Mcminn, Andrew, Hutchins, David A. and Ye, Naihao (2019) Ocean acidification increases iodine accumulation in kelp-based coastal food webs. Global Change Biology, 25 (2). pp. 629-639. ISSN 1354-1013

Aslam, Shazia N., Strauss, Jan, Thomas, David N., Mock, Thomas and Underwood, Graham J. C. (2018) Identifying metabolic pathways for production of extracellular polymeric substances by the diatom Fragilariopsis cylindrus inhabiting sea ice. The ISME Journal, 12. 1237–1251. ISSN 1751-7362

Brodie, Juliet, Ball, Steven G., Bouget, François-Yves, Chan, Cheong Xin, De Clerck, Olivier, Cock, J. Mark, Gachon, Claire, Grossman, Arthur R., Mock, Thomas, Raven, John A., Saha, Mahasweta, Smith, Alison G., Vardi, Assaf, Yoon, Hwan Su and Bhattacharya, Debashish (2017) Biotic interactions as drivers of algal origin and evolution. New Phytologist, 216 (3). pp. 670-681. ISSN 0028-646X

Kirkham, Amy, Richthammer, Patrick, Schmidt, Katrin, Wustman, Martin, Maeda, Yoshiaki, Hedrich, Rene, Brunner, Eike, Tanaka, Tsuyoshi, van Pee, Karl-Heinz, Falciatore, Angela and Mock, Thomas (2017) A role for the cell-wall protein silacidin in cell size of the diatom Thalassiosira pseudonana. The ISME Journal, 11 (11). pp. 2452-2464. ISSN 1751-7362

Paajanen, Pirita, Strauss, Jan, van Oosterhout, Cock, McMullan, Mark, Clark, Matthew D. and Mock, Thomas (2017) Building a locally diploid genome and transcriptome of the diatom Fragilariopsis cylindrus. Scientific Data, 4. ISSN 2052-4463

Teng, Linhong, Fan, Xiao, Xu, Dong, Zhang, Xiaowen, Mock, Thomas and Ye, Naihao (2017) Identification of genes under positive selection reveals differences in evolutionary adaptation between brown-algal species. Frontiers in Plant Science, 8. ISSN 1664-462X

Brodie, Juliet, Chan, Cheong Xin, De Clerck, Olivier, Cock, J. Mark, Coelho, Susana M., Gachon, Claire, Grossman, Arthur R., Mock, Thomas, Raven, John A., Smith, Alison G., Yoon, Hwan Su and Bhattacharya, Debashish (2017) The Algal Revolution. Trends in Plant Science, 22 (8). pp. 726-738. ISSN 1360-1385

Basu, Swaraj, Patil, Shrikant, Mapleson, Daniel, Russo, Monia Teresa, Vitale, Laura, Fevola, Cristina, Maumus, Florian, Casotti, Raffaella, Mock, Thomas, Caccamo, Mario, Montresor, Marina, Sanges, Remo and Ferrante, Maria Immacolata (2017) Finding a partner in the ocean: molecular and evolutionary bases of the response to sexual cues in a planktonic diatom. New Phytologist, 215 (1). 140–156. ISSN 0028-646X

Bentkowski, Piotr, van Oosterhout, Cock, Ashby, Ben and Mock, Thomas (2017) The effect of extrinsic mortality on genome size evolution in prokaryotes. The ISME Journal, 11 (4). 1011–1018. ISSN 1751-7362

Mock, Thomas, Otillar, Robert P., Strauss, Jan, McMullan, Mark, Paajanen, Pirita, Schmutz, Jeremy, Salamov, Asaf, Sanges, Remo, Toseland, Andrew, Ward, Ben J., Allen, Andrew E., Dupont, Christopher L., Frickenhaus, Stephan, Maumus, Florian, Veluchamy, Alaguraj, Wu, Taoyang, Barry, Kerrie W., Falciatore, Angela, Ferrante, Maria I., Fortunato, Antonio E., Glöckner, Gernot, Gruber, Ansgar, Hipkin, Rachel, Janech, Michael G., Kroth, Peter G., Leese, Florian, Lindquist, Erika A., Lyon, Barbara R., Martin, Joel, Mayer, Christoph, Parker, Micaela, Quesneville, Hadi, Raymond, James A., Uhlig, Christiane, Valas, Ruben E., Valentin, Klaus U., Worden, Alexandra Z., Armbrust, E. Virginia, Clark, Matthew D., Bowler, Chris, Green, Beverley R., Moulton, Vincent, van Oosterhout, Cock and Grigoriev, Igor V. (2017) Evolutionary genomics of a cold-adapted diatom: Fragilariopsis cylindrus. Nature, 541. 536–540. ISSN 0028-0836

Singh, Amit Kumar, Sharma, Nikunj, Farooqi, Humaira, Abdin, Malik Zainul, Mock, Thomas and Kumar, Shashi (2017) Phycoremediation of municipal wastewater by microalgae to produce biofuel. International Journal of Phytoremediation, 19 (9). pp. 805-812. ISSN 1522-6514

Hopes, Amanda, Nekrasov, Vladimir, Kamoun, Sophien and Mock, Thomas (2016) Editing of the urease gene by CRISPR-Cas in the diatom Thalassiosira pseudonana. Plant Methods, 12 (1). ISSN 1746-4811

Zhang, Xiaoyu, Gamarra, Jaime, Castro, Steven, Carrasco, Estela, Hernandez, Aaron, Mock, Thomas, Hadaegh, Ahmad R. and Read, Betsy A. (2016) Characterization of the small RNA transcriptome of the marine coccolithophorid, Emiliania huxleyi. PLoS One, 11 (4). ISSN 1932-6203

Mock, Thomas, Daines, Stuart, Geider, Richard, Collins, Sinead, Metoviev, Metovi, Millar, Andrew J, Moulton, Vincent and Lenton, Timothy (2016) Bridging the gap between omics and earth system science to better understand how environmental change impacts marine microbes. Global Change Biology, 22 (1). pp. 61-75. ISSN 1354-1013

Uhlig, Christiane, Kilpert, Fabian, Frickenhaus, Stephan, Kegel, Jessica U., Krell, Andreas, Mock, Thomas, Valentin, Klaus and Beszteri, Bánk (2015) In situ expression of eukaryotic ice-binding proteins in microbial communities of Arctic and Antarctic sea ice. ISME Journal, 9 (11). pp. 2537-2540. ISSN 1751-7362

Gruber, Ansgar, Rocap, Gabrielle, Kroth, Peter G., Armbrust, E. Virginia and Mock, Thomas (2015) Plastid proteome prediction for diatoms and other algae with secondary plastids of the red lineage. The Plant Journal, 81 (3). pp. 519-528. ISSN 0960-7412

Bentkowski, Piotr, van Oosterhout, Cock and Mock, Thomas (2015) A model of genome size evolution for prokaryotes in stable and fluctuating environments. Genome Biology and Evolution, 7 (8). 2344–2351. ISSN 1759-6653

McRose, Darcy, Guo, Jian, Monier, Adam, Sudek, Sebastian, Wilken, Susanne, Yan, Shuangchun, Mock, Thomas, Archibald, John M., Begley, Tadhg P., Reyes-Prieto, Adrian and Worden, Alexandra Z. (2014) Alternatives to vitamin B1 uptake revealed with discovery of riboswitches in multiple marine eukaryotic lineages. ISME Journal, 8 (12). pp. 2517-2529. ISSN 1751-7362

Toseland, Andrew, Moxon, Simon, Mock, Thomas and Moulton, Vincent (2014) Metatranscriptomes from diverse microbial communities: assessment of data reduction techniques for rigorous annotation. BMC Genomics, 15. ISSN 1471-2164

Lopez-Gomollon, Sara, Beckers, Matthew, Rathjen, Tina, Moxon, Simon, Maumus, Florian, Mohorianu, Irina, Moulton, Vincent, Dalmay, Tamas and Mock, Thomas (2014) Global discovery and characterization of small non-coding RNAs in marine microalgae. BMC Genomics, 15 (1). ISSN 1471-2164

Jahn, Martin T, Schmidt, Katrin and Mock, Thomas (2014) A novel cost effective and high-throughput isolation and identification method for marine microalgae. Plant Methods, 10 (1). ISSN 1746-4811

Keeling, Patrick J., Burki, Fabien, Wilcox, Heather M., Allam, Bassem, Allen, Eric E., Amaral-Zettler, Linda A., Armbrust, E. Virginia, Archibald, John M., Bharti, Arvind K., Bell, Callum J., Beszteri, Bank, Bidle, Kay D., Cameron, Connor T., Campbell, Lisa, Caron, David A., Cattolico, Rose Ann, Collier, Jackie L., Coyne, Kathryn, Davy, Simon K., Deschamps, Phillipe, Dyhrman, Sonya T., Edvardsen, Bente, Gates, Ruth D., Gobler, Christopher J., Greenwood, Spencer J., Guida, Stephanie M., Jacobi, Jennifer L., Jakobsen, Kjetill S., James, Erick R., Jenkins, Bethany, John, Uwe, Johnson, Matthew D., Juhl, Andrew R., Kamp, Anja, Katz, Laura A., Kiene, Ronald, Kudryavtsev, Alexander, Leander, Brian S., Lin, Senjie, Lovejoy, Connie, Lynn, Denis, Marchetti, Adrian, McManus, George, Nedelcu, Aurora M., Menden-Deuer, Susanne, Miceli, Cristina, Mock, Thomas, Montresor, Marina, Moran, Mary Ann, Murray, Shauna, Nadathur, Govind, Nagai, Satoshi, Ngam, Peter B., Palenik, Brian, Pawlowski, Jan, Petroni, Giulio, Piganeau, Gwenael, Posewitz, Matthew C., Rengefors, Karin, Romano, Giovanna, Rumpho, Mary E., Rynearson, Tatiana, Schilling, Kelly B., Schroeder, Declan C., Simpson, Alastair G.B., Slamovits, Claudio H., Smith, David R., Smith, G. Jason, Smith, Sarah R., Sosik, Heidi M., Stief, Peter, Theriot, Edward, Twary, Scott N., Umale, Pooja E., Vaulot, Daniel, Wawrik, Boris, Wheeler, Glen L., Wilson, William H., Xu, Yan, Zingone, Adriana and Worden, Alexandra Z. (2014) The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. PLoS Biology, 12 (6). ISSN 1544-9173

Hipkin, Rachel, Day, John G., Rad-Menéndez, Cecilia and Mock, Thomas (2014) The first evidence for genotypic stability in a cryopreserved transgenic diatom. Journal of Applied Phycology, 26 (1). pp. 65-71. ISSN 0921-8971

Hopes, Amanda and Mock, Thomas (2014) Diatoms glass - dwelling dynamos. Microbiology Today, 41 (1). pp. 20-23. ISSN 1464-0570

Lyon, Barbara and Mock, Thomas (2014) Polar microalgae: New approaches towards understanding adaptations to an extreme and changing environment. RNA Biology, 3 (1). pp. 56-80. ISSN 1547-6286

Read, Betsy A., Kegel, Jessica, Klute, Mary J., Kuo, Alan, Lefebvre, Stephane C., Maumus, Florian, Mayer, Christoph, Miller, John, Monier, Adam, Salamov, Asaf, Young, Jeremy, Aguilar, Maria, Claverie, Jean Michel, Frickenhaus, Stephan, Gonzalez, Karina, Herman, Emily K., Lin, Yao Cheng, Napier, Johnathan, Ogata, Hiroyuki, Sarno, Analissa F., Shmutz, Jeremy, Schroeder, Declan, De Vargas, Colomban, Verret, Frederic, von Dassow, Peter, Valentin, Klaus, van de Peer, Yves, Wheeler, Glen, Dacks, Joel B., Delwiche, Charles F., Dyhrman, Sonya T., Glöckner, Gernot, John, Uwe, Richards, Thomas, Worden, Alexandra Z., Zhang, Xiaoyu, Grigoriev, Igor V., Allen, Andrew E., Bidle, Kay, Borodovsky, Mark, Bowler, Chris, Brownlee, Colin, Cock, J. Mark, Elias, Marek, Gladyshev, Vadim N., Groth, Marco, Guda, Chittibabu, Hadaegh, Ahmad, Iglesias-Rodriguez, Maria Debora, Jenkins, Jerry, Jones, Bethan M., Lawson, Tracy, Leese, Florian, Lindquist, Erika, Lobanov, Alexei, Lomsadze, Alexandre, Malik, Shehre Banoo, Marsh, Mary E., MacKinder, Luke, Mock, Thomas, Mueller-Roeber, Bernd, Pagarete, António, Parker, Micaela, Probert, Ian, Quesneville, Hadi, Raines, Christine, Rensing, Stefan A., Riaño-Pachón, Diego Mauricio, Richier, Sophie, Rokitta, Sebastian, Shiraiwa, Yoshihiro, Soanes, Darren M., van der Giezen, Mark, Wahlund, Thomas M., Williams, Bryony, Wilson, Willie, Wolfe, Gordon and Wurch, Louie L. (2013) Pan genome of the phytoplankton Emiliania underpins its global distribution. Nature, 499 (7457). pp. 209-213. ISSN 0028-0836

Toseland, A., Daines, S. J., Clark, J. R., Kirkham, Amy, Strauss, J., Uhlig, C., Lenton, T. M., Valentin, K., Pearson, G. A., Moulton, V. and Mock, T. (2013) The impact of temperature on marine phytoplankton resource allocation and metabolism. Nature Climate Change, 3 (11). pp. 979-984. ISSN 1758-678X

Curtis, Bruce A., Tanifuji, Goro, Maruyama, Shinichiro, Gile, Gillian H., Hopkins, Julia F., Eveleigh, Robert J. M., Nakayama, Takuro, Malik, Shehre Banoo, Onodera, Naoko T., Slamovits, Claudio H., Spencer, David F., Lane, Christopher E., Gray, Michael W., Archibald, John M., Burki, Fabien, Hirakawa, Yoshihisa, Reyes-Prieto, Adrian, Keeling, Patrick J., Fast, Naomi M., Green, Beverley R., Grisdale, Cameron J., Gruber, Ansgar, Kroth, Peter G., Irimia, Manuel, Arias, Maria C., Ball, Steven G., Kuo, Alan, Schmutz, Jeremy, Grimwood, Jane, Lindquist, Erika, Lucas, Susan, Salamov, Asaf, Grigoriev, Igor V., Rensing, Stefan A., Symeonidi, Aikaterini, Elias, Marek, Herman, Emily K., Klute, Mary J., Dacks, Joel B., Oborník, Miroslav, Kořený, Luděk, Durnford, Dion G., Neilson, Jonathan A. D., Armbrust, E. Virginia, Rocap, Gabrielle, Aves, Stephen J., Liu, Yuan, Beiko, Robert G., Coutinho, Pedro, Henrissat, Bernard, Hempel, Franziska, Maier, Uwe G., Zauner, Stefan, Häppner, Marc P., Ishida, Ken Ichiro, Shirato, Shu, Suzuki, Shigekatsu, Kim, Eunsoo, Richards, Thomas A., McRose, Darcy, Worden, Alexandra Z., Mock, Thomas, Poole, Anthony M., Pritham, Ellen J., Roy, Scott W., Schaack, Sarah, Bell, Callum, Bharti, Arvind K., Crow, John A., Kramer, Robin and McFadden, Geoffrey I. (2012) Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs. Nature, 492 (7427). pp. 59-65. ISSN 0028-0836

Durkin, Colleen A., Marchetti, Adrian, Bender, Sara J., Truong, Tiffany, Morales, Rhonda, Mock, Thomas and Armbrust, E. Virginia (2012) Frustule-related gene transcription and the influence of diatom community composition on silica precipitation in an iron-limited environment. Limnology and Oceanography, 57 (6). pp. 1619-1633. ISSN 0024-3590

Mock, Thomas and Kirkham, Amy (2012) What can we learn from genomics approaches in marine ecology? From sequences to eco-systems biology! Marine Ecology, 33 (2). 131–148. ISSN 0173-9565

Hockin, Nicola Louise, Mock, Thomas, Mulholland, Francis, Kopriva, Stanislav and Malin, Gill (2012) The response of diatom central carbon metabolism to nitrogen starvation is different from that of green algae and higher plants. Plant Physiology, 158 (1). pp. 299-312. ISSN 0032-0889

Maheswari, Uma, Jabbari, Kamel, Petit, Jean Louis, Porcel, Betina M., Allen, Andrew E., Cadoret, Jean Paul, De Martino, Alessandra, Heijde, Marc, Kaas, Raymond, La Roche, Julie, Lopez, Pascal J., Martin-Jézéquel, Véronique, Meichenin, Agnès, Mock, Thomas, Schnitzler Parker, Micaela, Vardi, Assaf, Armbrust, E. Virginia, Weissenbach, Jean, Katinka, Michaël and Bowler, Chris (2010) Digital expression profiling of novel diatom transcripts provides insight into their biological functions. Genome Biology, 11 (8). ISSN 1474-760X

Bayer-Giraldi, Maddalena, Uhlig, Christiane, John, Uwe, Mock, Thomas and Valentin, Klaus (2010) Antifreeze proteins in polar sea ice diatoms: Diversity and gene expression in the genus Fragilariopsis. Environmental Microbiology, 12 (4). pp. 1041-1052. ISSN 1462-2920

Durkin, Colleen A., Mock, Thomas and Armbrust, E. Virginia (2009) Chitin in diatoms and its association with the cell wall. Eukaryotic Cell, 8 (7). pp. 1038-1050. ISSN 1535-9786

Maheswari, Uma, Mock, Thomas, Armbrust, E. Virginia and Bowler, Chris (2009) Update of the Diatom EST Database: A new tool for digital transcriptomics. Nucleic Acids Research, 37 (SUPPL. 1). D1001-D1005.

Worden, Alexandra Z., Lee, Jae-Hyeok, Mock, Thomas, Rouzé, Pierre, Simmons, Melinda P., Aerts, Andrea L., Allen, Andrew E., Cuvelier, Marie L., Derelle, Evelyne, Everett, Meredith V., Foulon, Elodie, Grimwood, Jane, Gundlach, Heidrun, Henrissat, Bernard, Napoli, Carolyn, McDonald, Sarah M., Parker, Micaela S., Rombauts, Stephane, Salamov, Aasf, Von Dassow, Peter, Badger, Jonathan H., Coutinho, Pedro M., Demir, Elif, Dubchak, Inna, Gentemann, Chelle, Eikrem, Wenche, Gready, Jill E., John, Uwe, Lanier, William, Lindquist, Erika A., Lucas, Susan, Mayer, Klaus F. X., Moreau, Herve, Not, Fabrice, Otillar, Robert, Panaud, Olivier, Pangilinan, Jasmyn, Paulsen, Ian, Piegu, Benoit, Poliakov, Aaron, Robbens, Steven, Schmutz, Jeremy, Toulza, Eve, Wyss, Tania, Zelensky, Alexander, Zhou, Kemin, Armbrust, E. Virginia, Bhattacharya, Debashish, Goodenough, Ursula W., Van De Peer, Yves and Grigoriev, Igor V. (2009) Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes micromonas. Science, 324 (5924). pp. 268-272. ISSN 1095-9203

Parker, Micaela S., Mock, Thomas and Armbrust, E. Virginia (2008) Genomic insights into marine microalgae. Annual Review of Genetics, 42. pp. 619-645.

Kroth, Peter G., Chiovitti, Anthony, Gruber, Ansgar, Martin-Jezequel, Veronique, Mock, Thomas, Parker, Micaela Schnitzler, Stanley, Michele S., Kaplan, Aaron, Caron, Lise, Weber, Till, Maheswari, Uma, Armbrust, E. Virginia and Bowler, Chris (2008) A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis. PLoS One, 3 (1). ISSN 1932-6203

Bowler, Chris, Allen, Andrew E., Badger, Jonathan H., Grimwood, Jane, Jabbari, Kamel, Kuo, Alan, Maheswari, Uma, Martens, Cindy, Maumus, Florian, Otillar, Robert P., Rayko, Edda, Salamov, Asaf, Vandepoele, Klaas, Beszteri, Bank, Gruber, Ansgar, Heijde, Marc, Katinka, Michael, Mock, Thomas, Valentin, Klaus, Verret, Fréderic, Berges, John A., Brownlee, Colin, Cadoret, Jean-Paul, Chiovitti, Anthony, Choi, Chang Jae, Coesel, Sacha, De Martino, Alessandra, Detter, J. Chris, Durkin, Colleen, Falciatore, Angela, Fournet, Jérome, Haruta, Miyoshi, Huysman, Marie J. J., Jenkins, Bethany D., Jiroutova, Katerina, Jorgensen, Richard E., Joubert, Yolaine, Kaplan, Aaron, Kroger, Nils, Kroth, Peter G., La Roche, Julie, Lindquist, Erica, Lommer, Markus, Martin-Jezequel, Véronique, Lopez, Pascal J., Lucas, Susan, Mangogna, Manuela, McGinnis, Karen, Medlin, Linda K., Montsant, Anton, Secq, Marie-Pierre Oudot–Le, Napoli, Carolyn, Obornik, Miroslav, Parker, Micaela Schnitzler, Petit, Jean-Louis, Porcel, Betina M., Poulsen, Nicole, Robison, Matthew, Rychlewski, Leszek, Rynearson, Tatiana A., Schmutz, Jeremy, Shapiro, Harris, Siaut, Magali, Stanley, Michele, Sussman, Michael R., Taylor, Alison R., Vardi, Assaf, von Dassow, Peter, Vyverman, Wim, Willis, Anusuya, Wyrwicz, Lucyan S., Rokhsar, Daniel S., Weissenbach, Jean, Armbrust, E. Virginia, Green, Beverley R., Van De Peer, Yves and Grigoriev, Igor V. (2008) The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature, 456 (7219). pp. 239-244.

Krell, Andreas, Beszteri, Bánk, Dieckmann, Gerhard, Glockner, Gernot, Valentin, Klaus and Mock, Thomas (2008) A new class of ice-binding proteins discovered in a salt-stress-induced cDNA library of the psychrophilic diatom Fragilariopsis cylindrus (Bacillariophyceae). European Journal of Phycology, 43 (4). pp. 423-433. ISSN 1469-4433

Mock, Thomas, Samanta, Manoj Pratim, Iverson, Vaughn, Berthiaume, Chris, Robison, Matthew, Holtermann, Karie, Durkin, Colleen, BonDurant, Sandra Splinter, Richmond, Kathryn, Rodesch, Matthew, Kallas, Toivo, Huttlin, Edward L., Cerrina, Francesco, Sussman, Michael R. and Armbrust, E. Virginia (2008) From the Cover: Whole-genome expression profiling of the marine diatom Thalassiosira pseudonana identifies genes involved in silicon bioprocesses. Proceedings of the National Academy of Sciences, 105 (5). pp. 1579-1584. ISSN 0027-8424

Janech, Michael G., Krell, Andreas, Mock, Thomas, Kang, Jae-Shin and Raymond, James A. (2006) Ice-binding proteins from sea ice diatoms (Bacillariophyceae). Journal of Phycology, 42 (2). pp. 410-416. ISSN 0022-3646

Mock, Thomas, Krell, Andreas, Glöckner, Gernot, Kolukisaoglu, Üner and Valentin, Klaus (2006) Analysis of expressed sequence tags (ESTS) from the polar diatom Fragilariopsis cylindrus. Journal of Phycology, 42 (1). pp. 78-85. ISSN 0022-3646

Mock, Thomas and Hoch, Nikolai (2005) Long-term temperature acclimation of photosynthesis in steady-state cultures of the polar diatom Fragilariopsis cylindrus. Photosynthesis Research, 85 (3). pp. 307-317. ISSN 0166-8595

Mock, Thomas and Thomas, David N. (2005) Recent advances in sea-ice microbiology. Environmental Microbiology, 7 (5). pp. 605-619. ISSN 1462-2912

Mock, Thomas and Valentin, Klaus (2004) Photosynthesis and cold acclmiation: Molecular evidence from a polar diatom. Journal of Phycology, 40 (4). pp. 732-741. ISSN 1529-8817

Mock, Thomas, Kruse, Marcel and Dieckmann, Gerhard S. (2003) A new microcosm to investigate oxygen dynamics at the sea ice water interface. Aquatic Microbial Ecology, 30 (2). pp. 197-205. ISSN 0948-3055

Biele, J., Ulamec, S., Garry, J., Sheridan, S., Morse, A. D., Barber, S., Wright, I., Tueg, H. and Mock, T. (2002) Melting probes at Lake Vostok and Europa. ESA Proceedings, 518. pp. 253-260.

Mock, Thomas (2002) In situ primary production in young Antarctic sea ice. Hydrobiologia, 470 (1/3). pp. 127-132. ISSN 1573-5117

Mock, Thomas, Dieckmann, Gerhard S., Haas, Christian, Krell, Andreas, Tison, Jean-Louis, Belem, Andre L., Papadimitriou, Stathis and Thomas, David N. (2002) Micro-optodes in sea ice: A new approach to investigate oxygen dynamics during sea ice formation. Aquatic Microbial Ecology, 29 (3). pp. 297-306. ISSN 0948-3055

Mock, Thomas and Kroon, Bernd M. A. (2002) Photosynthetic energy conversion under extreme conditions—II: The significance of lipids under light limited growth in Antarctic sea ice diatoms. Phytochemistry, 61 (1). pp. 53-60. ISSN 1873-3700

Mock, Thomas and Kroon, Bernd M. A. (2002) Photosynthetic energy conversion under extreme conditions—I: Important role of lipids as structural modulators and energy sink under N-limited growth in Antarctic sea ice diatoms. Phytochemistry, 61 (1). pp. 41-51. ISSN 1873-3700

Krembs, C, Mock, T and Gradinger, R (2001) A mesocosm study of physical-biological interactions in artificial sea ice: Effects of brine channel surface evolution and brine movement on algal biomass. Polar Biology, 24 (5). pp. 356-364. ISSN 0722-4060

Mock, Thomas and Gradinger, Rolf (2000) Changes in photosynthetic carbon allocation in algal assemblages of Arctic sea ice with decreasing nutrient concentrations and irradiance. Marine Ecology Progress Series, 202. pp. 1-11. ISSN 0171-8630

Mock, Thomas and Gradinger, Rolf (1999) Determination of Arctic ice algal production with a new in situ incubation technique. Marine Ecology Progress Series, 177. pp. 15-26. ISSN 0171-8630

Mock, Thomas, Meiners, Klaus M. and Giesenhagen, Hanna C. (1997) Bacteria in sea ice and underlying brackish water at 54°26'5"N (Baltic Sea, Kiel Bight). Marine Ecology Progress Series, 158. pp. 23-40. ISSN 0171-8630

Book Section

Armbrust, E. Virginia, van Creveld, Shiri Graff, Falciatore, Angela and Mock, Thomas (2022) Preface. In: The Molecular Life of Diatoms. Springer, v-viii. ISBN 9783030924980

Mock, Thomas, Hodgkinson, Kat, Wu, Taoyang, Moulton, Vincent, Duncan, Anthony, Oosterhout, Cock van and Pichler, Monica (2022) Structure and Evolution of Diatom Nuclear Genes and Genomes. In: The Molecular Life of Diatoms. Springer, pp. 111-145. ISBN 9783030924980

Hopes, Amanda, Thomas, David N. and Mock, Thomas (2017) Polar Microalgae: Functional Genomics, Physiology, and the Environment. In: Psychrophiles: From Biodiversity to Biotechnology. Springer, pp. 305-344. ISBN 978-3-319-57056-3

Mock, Thomas and Medlin, Linda K. (2012) Genomics and Genetics of Diatoms. In: Advances in Botanical Research. Advances in Botanical Research . Academic Press Inc., pp. 245-284.

Arrigo, Kevin R., Mock, Thomas and Lizotte, Michael P. (2009) Primary Producers and Sea Ice. In: Sea Ice. Blackwell Publishing, London, pp. 283-325. ISBN 9781405185806

Mock, Thomas and Thomas, David N. (2008) Microalgae in polar regions:Linking functional genomics and physiology with environmental conditions. In: Psychrophiles. Springer Berlin / Heidelberg, pp. 285-312. ISBN 9783540743347

Mock, T and Junge, K (2007) Psychrophilic diatoms: Mechanisms for survival in freeze-thaw cycles. In: Extremophilic Algae, Cyanobacteria and Non-Photosynthetic Protists. Springer.

Mock, T and Thomas, DN (2007) Microalgae from polar regions: Functional genomics and physiology. In: Psychrophiles: From Biodiversity to Biotechnology. Springer, New York.