Items where Research Group is "Centre for Molecular and Structural Biochemistry

Article

Arkenberg, Anke, Runkel, Sebastian, Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Rowley, Gary ORCID: https://orcid.org/0000-0002-5421-4333 (2011) The production and detoxification of a potent cytotoxin, nitric oxide, by pathogenic enteric bacteria. Biochemical Society Transactions, 39 (6). pp. 1876-1879. ISSN 0300-5127

Boutemy, Laurence S., King, Stuart R. F., Win, Joe, Hughes, Richard K., Clarke, Thomas A. ORCID: https://orcid.org/0000-0002-6234-1914, Blumenschein, Tharin M. A. ORCID: https://orcid.org/0000-0002-4932-5178, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Banfield, Mark J. (2011) Structures of Phytophthora RXLR effector proteins: a conserved but adaptable fold underpins functional diversity. Journal of Biological Chemistry, 286 (41). pp. 35834-35842. ISSN 0021-9258

Bowater, Laura and Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807 and Society for General Microbiology (2011) Survival of the Fittest. Microbiology Today, 38 (2). pp. 126-127.

Bradley, Justin M., Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226 and Cheesman, Myles R. (2011) Electrochemical titrations and reaction time courses monitored in situ by magnetic circular dichroism spectroscopy. Analytical Biochemistry, 419 (2). pp. 110-116. ISSN 1096-0309

Bradley, Justin M., Silkstone, Gary, Wilson, Michael T., Cheesman, Myles R. and Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226 (2011) Probing a complex of cytochromecand cardiolipin by magnetic circular dichroism spectroscopy: Implications for the initial events in apoptosis. Journal of the American Chemical Society, 133 (49). pp. 19676-19679. ISSN 0002-7863

Cabrera, Juan J., Sánchez, Cristina, Gates, Andrew J. ORCID: https://orcid.org/0000-0002-4594-5038, Bedmar, Eulogio J., Mesa, Socorro, Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Delgado, María J. (2011) The nitric oxide response in plant-associated endosymbiotic bacteria. Biochemical Society Transactions, 39 (6). pp. 1880-1885. ISSN 0300-5127

Cheetham, Matthew R., Bramble, Jonathan P., McMillan, Duncan G. G., Krzeminski, Lukasz, Han, Xiaojun, Johnson, Benjamin R. G., Bushby, Richard J., Olmsted, Peter D., Jeuken, Lars J. C., Marritt, Sophie J., Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226 and Evans, Stephen D. (2011) Concentrating membrane proteins using asymmetric traps and AC electric fields. Journal of the American Chemical Society, 133 (17). pp. 6521-6524. ISSN 0002-7863

Clarke, Thomas A. ORCID: https://orcid.org/0000-0002-6234-1914, Edwards, Marcus J., Gates, Andrew J. ORCID: https://orcid.org/0000-0002-4594-5038, Hall, Andrea, White, Gaye F., Bradley, Justin, Reardon, Catherine L., Shi, Liang, Beliaev, Alexander S., Marshall, Matthew J., Wang, Zheming, Watmough, Nicholas J., Fredrickson, James K., Zachara, John M., Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226 and Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 (2011) Structure of a bacterial cell surface decaheme electron conduit. Proceedings of the National Academy of Sciences, 108 (23). pp. 9384-9389. ISSN 0027-8424

Clarke, Tom ORCID: https://orcid.org/0000-0002-6234-1914, Fairhurst, Shirley, Lowe, David J., Watmough, Nick and Eady, Robert R. (2011) Electron transfer and half-reactivity in nitrogenase. Biochemical Society Transactions, 39 (1). pp. 201-206. ISSN 0300-5127

Crack, Jason C., Smith, Laura J., Stapleton, Melanie R., Peck, Jamie, Watmough, Nicholas J., Buttner, Mark J., Buxton, Roger S., Green, Jeffrey, Oganesyan, Vasily S. ORCID: https://orcid.org/0000-0002-8738-1146, Thomson, Andrew J. and Le Brun, Nick E. ORCID: https://orcid.org/0000-0001-9780-4061 (2011) Mechanistic insight into the nitrosylation of the [4Fe−4S] cluster of WhiB-like proteins. Journal of the American Chemical Society, 133 (4). pp. 1112-1121. ISSN 0002-7863

Debieux, Charles M., Dridge, Elizabeth J., Mueller, Claudia M., Splatt, Peter, Paszkiewicz, Konrad, Knight, Iona, Florance, Hannah, Love, John, Titball, Richard W., Lewis, Richard J., Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Butler, Clive S. (2011) A bacterial process for selenium nanosphere assembly. Proceedings of the National Academy of Sciences, 108 (33). pp. 13480-13485. ISSN 0027-8424

Driscoll, Max D., McLean, Kirsty J., Cheesman, Myles R., Jowitt, Thomas A., Howard, Marjorie, Carroll, Paul, Parish, Tanya and Munro, Andrew W. (2011) Expression and characterization of Mycobacterium tuberculosis CYP144: Common themes and lessons learned in the M. tuberculosis P450 enzyme family. Biochimica et Biophysica Acta - Proteins and Proteomics, 1814 (1). pp. 76-87. ISSN 1570-9639

Field, Sarah J., Roldan, M. Dolores, Marritt, Sophie J., Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226, Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Watmough, Nicholas J. (2011) Electron transfer to the active site of the bacterial nitric oxide reductase is controlled by ligand binding to heme b3. Biochimica et Biophysica Acta (BBA) - Bioenergetics, 1807 (4). pp. 451-457.

Gates, Andrew J. ORCID: https://orcid.org/0000-0002-4594-5038, Butler, Clive S., Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226 (2011) Electrocatalytic reduction of nitrate and selenate by NapAB. Biochemical Society Transactions, 39 (1). pp. 236-242. ISSN 0300-5127

Gates, Andrew J. ORCID: https://orcid.org/0000-0002-4594-5038, Kemp, Gemma L., To, Chun Yip, Mann, James, Marritt, Sophie J., Mayes, Andrew G., Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226 (2011) The relationship between redox enzyme activity and electrochemical potential—cellular and mechanistic implications from protein film electrochemistry. Physical Chemistry Chemical Physics, 13 (17). pp. 7720-7731. ISSN 1463-9076

Gates, Andrew J. ORCID: https://orcid.org/0000-0002-4594-5038, Luque‑Almagro, Victor M., Goddard, Alan D., Ferguson, Stuart J., Roldán, M. Dolores and Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 (2011) A composite biochemical system for bacterial nitrate and nitrite assimilation as exemplified by Paracoccus denitrificans. Biochemical Journal, 435 (3). pp. 743-753. ISSN 0264-6021

Goddard, Alan D., Stevens, Julie M., Rao, Feng, Mavridou, Despoina A.I., Chan, Weelee, Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832, Allen, James W.A. and Ferguson, Stuart J. (2011) c-Type cytochrome biogenesis can occur via a natural Ccm system lacking CcmH, CcmG, and the heme-binding histidine of CcmE (Journal of Biological Chemistry (2010) 285, (22882-22889)). Journal of Biological Chemistry, 286 (33). p. 29442. ISSN 0021-9258

Howell, Lesley A., Waller, Zoe A. E., Bowater, Richard ORCID: https://orcid.org/0000-0002-2745-7807, O'Connell, Maria ORCID: https://orcid.org/0000-0002-0267-0951 and Searcey, Mark ORCID: https://orcid.org/0000-0003-2273-8949 (2011) A small molecule that induces assembly of a four way DNA junction at low temperature. Chemical Communications, 47 (29). pp. 8262-8264. ISSN 1359-7345

Jablonskytė, Aušra, Wright, Joseph A. ORCID: https://orcid.org/0000-0001-9603-1001, Fairhurst, Shirley A., Peck, Jamie N. T., Ibrahim, Saad K., Oganesyan, Vasily S. ORCID: https://orcid.org/0000-0002-8738-1146 and Pickett, Christopher J. (2011) Paramagnetic bridging hydrides of relevance to catalytic hydrogen evolution at metallosulfur centers. Journal of the American Chemical Society, 133 (46). pp. 18606-18609. ISSN 0002-7863

Jayasooriya, Upali A., Peck, Jamie N. T., Elaine Barclay, J., Hardy, Sinead M., Chumakov, Aleksandr I., Evans, David J., Pickett, Christopher J. and Oganesyan, Vasily S. ORCID: https://orcid.org/0000-0002-8738-1146 (2011) Nuclear inelastic scattering spectroscopy of tris(acetylacetonate)iron(III); A vibrational probe via the iron atom. Chemical Physics Letters, 518. pp. 119-123.

Julien, Olivier, Mercier, Pascal, Allen, Claire N., Fisette, Olivier, Ramos, Carlos H. I., Lagüe, Patrick, Blumenschein, Tharin M. A. ORCID: https://orcid.org/0000-0002-4932-5178 and Sykes, Brian D. (2011) Is there nascent structure in the intrinsically disordered region of troponin I? Proteins: Structure, Function, and Bioinformatics, 79 (4). pp. 1240-1250. ISSN 0887-3585

Kuprusevicius, Egidijus, White, Gaye and Oganesyan, Vasily S. ORCID: https://orcid.org/0000-0002-8738-1146 (2011) Prediction of nitroxide spin label EPR spectra from MD trajectories: Application to myoglobin. Faraday Discussions, 148. pp. 283-298.

Little, Richard, Salinas, Paloma, Slavny, Peter, Clarke, Thomas A. ORCID: https://orcid.org/0000-0002-6234-1914 and Dixon, Ray (2011) Substitutions in the redox-sensing PAS domain of the NifL regulatory protein define an inter-subunit pathway for redox signal transmission. Molecular Microbiology, 82 (1). pp. 222-235. ISSN 1365-2958

Lockwood, Colin, Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226, Clarke, Thomas A. ORCID: https://orcid.org/0000-0002-6234-1914 and Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 (2011) Molecular interactions between multihaem cytochromes: probing the protein–protein interactions between pentahaem cytochromes of a nitrite reductase complex. Biochemical Society Transactions, 39 (1). pp. 263-268. ISSN 0300-5127

Lockwood, Colin W. J., Clarke, Thomas A. ORCID: https://orcid.org/0000-0002-6234-1914, Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226, Hemmings, Andrew M. ORCID: https://orcid.org/0000-0003-3053-3134 and Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 (2011) Characterization of the active site and calcium binding in cytochromecnitrite reductases. Biochemical Society Transactions, 39 (6). pp. 1871-1875. ISSN 0300-5127

Luque‑Almagro, Victor M., Gates, Andrew J. ORCID: https://orcid.org/0000-0002-4594-5038, Moreno‑Vivián, Conrado, Ferguson, Stuart J., Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Roldán, M. Dolores (2011) Bacterial nitrate assimilation: gene distribution and regulation. Biochemical Society Transactions, 39 (6). pp. 1838-1843. ISSN 0300-5127

Macmillan, Fraser ORCID: https://orcid.org/0000-0002-2410-4790, Kacprzak, Sylwia, Hellwig, Petra, Grimaldi, Stéphane, Michel, Hartmut and Kaupp, Martin (2011) Elucidating mechanisms in haem copper oxidases: The high-affinity Q(H) binding site in quinol oxidase as studied by DONUT-HYSCORE spectroscopy and density functional theory. Faraday Discussions, 148. pp. 315-344. ISSN 1364-5498

Martínez‑Espinosa, Rosa María, Cole, Jeffrey A., Richardson, David ORCID: https://orcid.org/0000-0002-6847-1832 and Watmough, Nick (2011) Enzymology and ecology of the nitrogen cycle. Biochemical Society Transactions, 39 (1). pp. 175-178. ISSN 0300-5127

Oganesyan, V. S. ORCID: https://orcid.org/0000-0002-8738-1146 (2011) A general approach for prediction of motional EPR spectra from Molecular Dynamics (MD) simulations: application to spin labelled protein. Physical Chemistry Chemical Physics, 13 (10). pp. 4724-4737. ISSN 1463-9076

Pergolizzi, Giulia, Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807 and Wagner, Gerd K. (2011) A novel fluorescent probe for NAD-consuming enzymes. Chemical Communications, 47 (47). pp. 12655-12657. ISSN 1359-7345

Reddy, Kaalak, Tam, Mandy, Bowater, Richard P. ORCID: https://orcid.org/0000-0002-2745-7807, Barber, Miriam, Tomlinson, Matthew, Nichol Edamura, Kerrie, Wang, Yuh-Hwa and Pearson, Christopher E. (2011) Determinants of R-loop formation at convergent bidirectionally transcribed trinucleotide repeats. Nucleic Acids Research, 39 (5). pp. 1749-1762. ISSN 0305-1048

Schmidt, Christoph S., Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Baggs, Elizabeth M. (2011) Constraining the conditions conducive to dissimilatory nitrate reduction to ammonium in temperate arable soils. Soil Biology and Biochemistry, 43 (7). pp. 1607-1611. ISSN 0038-0717

Simon, Jörg, Kern, Melanie, Hermann, Bianca, Einsle, Oliver and Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226 (2011) Physiological function and catalytic versatility of bacterial multihaem cytochromescinvolved in nitrogen and sulfur cycling. Biochemical Society Transactions, 39 (6). pp. 1864-1870. ISSN 0300-5127

Sánchez, Cristina, Cabrera, Juan J., Gates, Andrew J. ORCID: https://orcid.org/0000-0002-4594-5038, Bedmar, Eulogio J., Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Delgado, María J. (2011) Nitric oxide detoxification in the rhizobia–legume symbiosis. Biochemical Society Transactions, 39 (1). pp. 184-188. ISSN 0300-5127

White, Gaye F., Singleton, Chloe, Todd, Jonathan D., Cheesman, Myles R., Johnston, Andrew W. B. and Le Brun, Nick E. ORCID: https://orcid.org/0000-0001-9780-4061 (2011) Heme binding to the second, lower-affinity site of the global iron regulator Irr from Rhizobium leguminosarum promotes oligomerization. FEBS Journal, 278 (12). pp. 2011-2021. ISSN 1742-4658

Yasmin, Samina, Andrews, Simon C., Moore, Geoffrey R. and Le Brun, Nick E. ORCID: https://orcid.org/0000-0001-9780-4061 (2011) A new role for heme, facilitating release of iron from the bacterioferritin iron biomineral. The Journal of Biological Chemistry, 286 (5). pp. 3473-3483. ISSN 1083-351X

Yasmin, Samina, Andrews, Simon C., Moore, Geoffrey R. and Le Brun, Nick E. ORCID: https://orcid.org/0000-0001-9780-4061 (2011) A new role for heme: facilitating release of iron from the bacterioferritin iron biomineral. The Journal of Biological Chemistry, 286 (5). pp. 3473-3483. ISSN 1083-351X

Zafrilla, Basilio, Martínez‑Espinosa, Rosa María, Bonete, Mari­a José, Butt, Julea N. ORCID: https://orcid.org/0000-0002-9624-5226, Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Gates, Andrew J. ORCID: https://orcid.org/0000-0002-4594-5038 (2011) A haloarchaeal ferredoxin electron donor that plays an essential role in nitrate assimilation. Biochemical Society Transactions, 39 (6). pp. 1844-1848. ISSN 0300-5127

von der Hocht, Iris, van Wonderen, Jessica H., Hilbers, Florian, Angerer, Heike, MacMillan, Fraser ORCID: https://orcid.org/0000-0002-2410-4790 and Michel, Harmut (2011) Interconversions of P and F intermediates of cytochrome c oxidase from Paracoccus denitrificans. Proceedings of the National Academy of Sciences of the United States of America, 108 (10). pp. 3964-396. ISSN 1091-6490

von der Hocht, Iris, van Wonderen, Jessica H., Hilbers, Florian, Angerer, Heike, MacMillan, Fraser ORCID: https://orcid.org/0000-0002-2410-4790 and Michel, Hartmut (2011) Interconversions of P and F intermediates of cytochrome c oxidase from Paracoccus denitrificans. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 108 (10). pp. 3964-3969. ISSN 1091-6490

Öztürk, Mehmet and Watmough, Nicholas J. (2011) Mutagenesis of tyrosine residues within helix VII in subunit I of the cytochrome cbb3 oxidase from Rhodobacter capsulatus. Molecular Biology Reports, 38 (5). pp. 3319-3326. ISSN 1573-4978

Book Section

Wexler, M, Bond, PL, Richardson, DJ ORCID: https://orcid.org/0000-0002-6847-1832 and Johnston, AWB (2011) Functional screening of a wide host-range metagenomic library from a wastewater treatment plant yields a novel alcohol/aldehyde dehydrogease. In: Metagenomics and Different Habitats Handbook of Molecular Microbial Ecology. Wiley. ISBN 978-0-470-64719-6

Wexler, Margaret, Bond, Philip L., Richardson, David J. ORCID: https://orcid.org/0000-0002-6847-1832 and Johnston, Andrew W.B. (2011) Functional Screening a Wide Host-Range Metagenomic Library from a Wastewater Treatment Plant Yields a Novel Alcohol/Aldehyde Dehydrogenase. In: Handbook of Molecular Microbial Ecology II. Wiley, pp. 451-459. ISBN 9780470647196

Conference or Workshop Item

Coles, MM, Peck, JN, Oganesyan, VS ORCID: https://orcid.org/0000-0002-8738-1146 and Andrews, DL (2011) Assessing limitations to the two-level approximation in nonlinear optics for organic chromophores by ab initio methods. In: UNSPECIFIED.