Items where Author is "Win, Joe"

Canham, James, Win, Joe and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and GetGenome Network (2024) GetGenome: Overcoming inequalities in access to genomics technology. PLoS Biology, 22 (8). ISSN 1544-9173

Barragan, Ana Cristina, Latorre, Sergio M., Malmgren, Angus, Harant, Adeline, Win, Joe, Sugihara, Yu, Burbano, Hernán A., Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Langner, Thorsten (2024) Multiple horizontal mini-chromosome transfers drive genome evolution of clonal blast fungus lineages. Molecular Biology and Evolution, 41 (8). ISSN 0737-4038

De la Concepcion, Juan Carlos, Langner, Thorsten, Fujisaki, Koki, Yan, Xia, Were, Vincent, Ching Lam, Anson Ho, Saado, Indira, Brabham, Helen J., Win, Joe, Yoshida, Kentaro, Talbot, Nicholas J. ORCID: https://orcid.org/0000-0001-6434-7757, Terauchi, Ryohei, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Banfield, Mark J. (2024) Zinc-finger (ZiF) fold secreted effectors form a functionally diverse family across lineages of the blast fungus Magnaporthe oryzae. PLoS Pathogens, 20 (6). ISSN 1553-7366

Latorre, Sergio M., Were, Vincent M., Foster, Andrew J., Langner, Thorsten, Malmgren, Angus, Harant, Adeline, Asuke, Soichiro, Reyes-Avila, Sarai, Gupta, Dipali Rani, Jensen, Cassandra, Ma, Weibin, Mahmud, Nur Uddin, Mehebub, Md Shåbab, Mulenga, Rabson M., Muzahid, Abu Naim Md, Paul, Sanjoy Kumar, Rabby, S. M.Fajle, Al Mahbub Rahat, Abdullah, Ryder, Lauren, Shrestha, Ram-Krishna, Sichilima, Suwilanji, Soanes, Darren M., Singh, Pawan Kumar, Bentley, Alison R., Saunders, Diane G. O., Tosa, Yukio, Croll, Daniel, Lamour, Kurt H., Islam, Tofazzal, Tembo, Batiseba, Win, Joe, Talbot, Nicholas J. ORCID: https://orcid.org/0000-0001-6434-7757, Burbano, Hernán A. and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2023) Genomic surveillance uncovers a pandemic clonal lineage of the wheat blast fungus. PLoS Biology, 21 (4). ISSN 1544-9173

Sugihara, Yu, Abe, Yoshiko, Takagi, Hiroki, Abe, Akira, Shimizu, Motoki, Ito, Kazue, Kanzaki, Eiko, Oikawa, Kaori, Kourelis, Jiorgos ORCID: https://orcid.org/0000-0002-9007-1333, Langner, Thorsten, Win, Joe, Białas, Aleksandra, Lüdke, Daniel, Contreras, Mauricio P., Chuma, Izumi, Saitoh, Hiromasa, Kobayashi, Michie, Zheng, Shuan, Tosa, Yukio, Banfield, Mark J., Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Terauchi, Ryohei and Fujisaki, Koki (2023) Disentangling the complex gene interaction networks between rice and the blast fungus identifies a new pathogen effector. PLoS Biology, 21 (1). ISSN 1545-7885

Kamikawa, Ryoma, Mochizuki, Takako, Sakamoto, Mika, Tanizawa, Yasuhiro, Nakayama, Takuro, Onuma, Ryo, Cenci, Ugo, Moog, Daniel, Speak, Samuel ORCID: https://orcid.org/0000-0002-4207-7562, Sarkozi, Krisztina, Toseland, Andrew, van Oosterhout, Cock ORCID: https://orcid.org/0000-0002-5653-738X, Oyama, Kaori, Kato, Misako, Kume, Keitaro, Kayama, Motoki, Azuma, Tomonori, Ishii, Ken-ichiro, Miyashita, Hideaki, Henrissat, Bernard, Lombard, Vincent, Win, Joe, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Kashiyama, Yuichiro, Mayama, Shigeki, Miyagishima, Shin-ya, Tanifuji, Goro, Mock, Thomas ORCID: https://orcid.org/0000-0001-9604-0362 and Nakamura, Yasukazu (2022) Genome evolution of a nonparasitic secondary heterotroph, the diatom Nitzschia putrida. Science Advances, 8 (17). ISSN 2375-2548

Bentham, Adam R., Petit-Houdenot, Yohann, Win, Joe, Chuma, Izumi, Terauchi, Ryohei, Banfield, Mark J., Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Langner, Thorsten (2021) A single amino acid polymorphism in a conserved effector of the multihost blast fungus pathogen expands host-target binding spectrum. PLoS Pathogens, 17 (11). ISSN 1553-7374

Petre, Benjamin, Contreras, Mauricio P., Bozkurt, Tolga O., Schattat, Martin H., Sklenar, Jan, Schornack, Sebastian, Abd-El-Haliem, Ahmed, Castells-Graells, Roger, Lozano-Durán, Rosa, Dagdas, Yasin F., Menke, Frank L. H. ORCID: https://orcid.org/0000-0003-2490-4824, Jones, Alexandra M. E., Vossen, Jack H., Robatzek, Silke, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Win, Joe (2021) Host-interactor screens of Phytophthora infestans RXLR proteins reveal vesicle trafficking as a major effector-targeted process. The Plant Cell, 33 (5). 1447–1471. ISSN 1040-4651

Wang, Shuaishuai, Xing, Rongkang, Wang, Yan, Shu, Haidong, Fu, Shenggui, Huang, Jie, Paulus, Judith K., Schuster, Mariana, Saunders, Diane G. O., Win, Joe, Vleeshouwers, Vivianne, Wang, Yuanchao, Zheng, Xiaobo, van der Hoorn, Renier A. l. and Dong, Suomeng (2021) Cleavage of a pathogen apoplastic protein by plant subtilases activates host immunity. New Phytologist, 229 (6). pp. 3424-3439. ISSN 0028-646X

Langner, Thorsten, Harant, Adeline, Gomez-Luciano, Luis B., Shrestha, Ram K., Malmgren, Angus, Latorre, Sergio M., Burbano, Hernán A., Win, Joe and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2021) Genomic rearrangements generate hypervariable mini-chromosomes in host-specific isolates of the blast fungus. PLoS Genetics, 17 (2). ISSN 1553-7390

Guo, Yanan, Dupont, Pierre Yves, Mesarich, Carl H., Yang, Bo, McDougal, Rebecca L., Panda, Preeti, Dijkwel, Paul, Studholme, David J., Sambles, Christine, Win, Joe, Wang, Yuanchao, Williams, Nari M. and Bradshaw, Rosie E. (2020) Functional analysis of RXLR effectors from the New Zealand kauri dieback pathogen Phytophthora agathidicida. Molecular Plant Pathology, 21 (9). pp. 1131-1148. ISSN 1464-6722

Petit-Houdenot, Yohann, Langner, Thorsten, Harant, Adeline, Win, Joe and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2020) A clone resource of Magnaporthe oryzae effectors that share sequence and structural similarities across host-specific lineages. Molecular Plant-Microbe Interactions, 33 (8). pp. 1032-1035. ISSN 0894-0282

Paulus, Judith K, Kourelis, Jiorgos ORCID: https://orcid.org/0000-0002-9007-1333, Ramasubramanian, Selva, Homma, Felix, Godson, Alice, Hörger, Anja C, Hong, Tram Ngoc, Krahn, Daniel, Ossorio Carballo, Laura, Wang, Shuaishuai, Win, Joe, Smoker, Matthew, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Dong, Suomeng and van der Hoorn, Renier A L (2020) Extracellular proteolytic cascade in tomato activates immune protease Rcr3. Proceedings of the National Academy of Sciences of the United States of America, 117 (29). pp. 17409-17417. ISSN 1091-6490

Latorre, Sergio M., Reyes-Avila, C. Sarai, Malmgren, Angus, Win, Joe, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Burbano, Hernán A. (2020) Differential loss of effector genes in three recently expanded pandemic clonal lineages of the rice blast fungus. BMC Biology, 18. ISSN 1741-7007

Lin, Xiao, Wang, Shumei, De Rond, Laura, Bertolin, Nicoletta, Wouters, Roland H. M., Wouters, Doret, Domazakis, Emmanouil, Bitew, Mulusew Kassa, Win, Joe, Dong, Suomeng, Visser, Richard G. F., Birch, Paul, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Vleeshouwers, Vivianne G. A. A. (2020) Divergent evolution of PcF/SCR74 effectors in oomycetes is associated with distinct recognition patterns in solanaceous plants. mBIO, 11 (3). pp. 1-12. ISSN 2150-7511

Dhaouadi, Sabrine, Win, Joe, Mougou, Amira Hamdane, Harant, Adeline, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Rhouma, Ali (2020) Genome sequences of plant-associated rhodococcus sp. isolates from Tunisia. Microbiology Resource Announcements, 9 (23).

Adachi, Hiroaki, Contreras, Mauricio, Harant, Adeline, Wu, Chih-Hang, Derevnina, Lida, Sakai, Toshiyuki, Duggan, Cian, Moratto, Eleonora, Bozkurt, Tolga O., Maqbool, Abbas, Win, Joe and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2019) An N-terminal motif in NLR immune receptors is functionally conserved across distantly related plant species. eLife, 8. ISSN 2050-084X

Misas Villamil, Johana C., Mueller, André N., Demir, Fatih, Meyer, Ute, Ökmen, Bilal, Schulze Hüynck, Jan, Breuer, Marlen, Dauben, Helen, Win, Joe, Huesgen, Pitter F. and Doehlemann, Gunther (2019) A fungal substrate mimicking molecule suppresses plant immunity via an inter-kingdom conserved motif. Nature Communications, 10 (1). ISSN 2041-1723

Kobayashi, Michie, Hiraka, Yukie, Abe, Akira, Yaegashi, Hiroki, Natsume, Satoshi, Kikuchi, Hideko, Takagi, Hiroki, Saitoh, Hiromasa, Win, Joe, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Terauchi, Ryohei (2017) Genome analysis of the foxtail millet pathogen Sclerospora graminicola reveals the complex effector repertoire of graminicolous downy mildews. BMC Genomics, 18. ISSN 1471-2164

Nekrasov, Vladimir, Wang, Congmao, Win, Joe, Lanz, Christa, Weigel, Detlef and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2017) Rapid generation of a transgene-free powdery mildew resistant tomato by genome deletion. Scientific Reports, 7. ISSN 2045-2322

Petre, Benjamin, Win, Joe, Menke, Frank L H ORCID: https://orcid.org/0000-0003-2490-4824 and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2017) Protein-Protein Interaction Assays with Effector-GFP Fusions in Nicotiana benthamiana. In: Wheat Rust Diseases. Methods in Molecular Biology . Humana Press, pp. 85-98. ISBN 978-1-4939-7248-7

Islam, M. Tofazzal, Croll, Daniel, Gladieux, Pierre, Soanes, Darren M., Persoons, Antoine, Bhattacharjee, Pallab, Hossain, Md. Shaid, Gupta, Dipali Rani, Rahman, Md. Mahbubur, Mahboob, M. Golam, Cook, Nicola, Salam, Moin U., Surovy, Musrat Zahan, Sancho, Vanessa Bueno, Maciel, João Leodato Nunes, Nhanijúnior, Antonio, Castroagudín, Vanina Lilián, de Assis Reges, Juliana T., Ceresini, Paulo Cezar, Ravel, Sebastien, Kellner, Ronny, Fournier, Elisabeth, Tharreau, Didier, Lebrun, Marc-Henri, McDonald, Bruce A., Stitt, Timothy, Swan, Daniel, Talbot, Nicholas J., Saunders, Diane G. O., Win, Joe and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2016) Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae. BMC Biology, 14. ISSN 1741-7007

Petre, Benjamin, Lorrain, Cécile, Saunders, Diane G O, Win, Joe, Sklenar, Jan, Duplessis, Sébastien and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2016) Rust fungal effectors mimic host transit peptides to translocate into chloroplasts. Cellular Microbiology, 18 (4). pp. 453-465. ISSN 1462-5814

Petre, Benjamin, Saunders, Diane G O, Sklenar, Jan, Lorrain, Cécile, Krasileva, Ksenia V, Win, Joe, Duplessis, Sébastien and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2016) Heterologous expression screens in Nicotiana benthamiana identify a candidate effector of the wheat Yellow Rust Pathogen that associates with processing bodies. PLoS One, 11 (2). ISSN 1932-6203

Dagdas, Yasin F, Belhaj, Khaoula, Maqbool, Abbas, Chaparro-Garcia, Angela, Pandey, Pooja, Petre, Benjamin, Tabassum, Nadra, Cruz-Mireles, Neftaly, Hughes, Richard K, Sklenar, Jan, Win, Joe, Menke, Frank ORCID: https://orcid.org/0000-0003-2490-4824, Findlay, Kim, Banfield, Mark J, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Bozkurt, Tolga O (2016) An effector of the Irish potato famine pathogen antagonizes a host autophagy cargo receptor. eLife, 5. ISSN 2050-084X

Sharma, Rahul, Xia, Xiaojuan, Cano, Liliana M., Evangelisti, Edouard, Kemen, Eric, Judelson, Howard, Oome, Stan, Sambles, Christine, van den Hoogen, D. Johan, Kitner, Miloslav, Klein, Joël, Meijer, Harold J G, Spring, Otmar, Win, Joe, Zipper, Reinhard, Bode, Helge B., Govers, Francine, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Schornack, Sebastian, Studholme, David J., Van den Ackerveken, Guido and Thines, Marco (2015) Genome analyses of the sunflower pathogen Plasmopara halstedii provide insights into effector evolution in downy mildews and Phytophthora. BMC Genomics, 16 (1). ISSN 1471-2164

Oliva, Ricardo F., Cano, Liliana M., Raffaele, Sylvain, Win, Joe, Bozkurt, Tolga O., Belhaj, Khaoula, Oh, Sang-keun, Thines, Marco and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2015) A recent expansion of the RXLR effector gene Avrblb2 is maintained in global populations of Phytophthora infestans indicating different contributions to virulence. Molecular Plant-Microbe Interactions, 28 (8). pp. 901-912. ISSN 0894-0282

Petre, Benjamin, Saunders, Diane G. O., Sklenar, Jan, Lorrain, Cécile, Win, Joe, Duplessis, Sébastien and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2015) Candidate effector proteins of the rust pathogen Melampsora larici-populina target diverse plant cell compartments. Molecular Plant-Microbe Interactions, 28 (6). pp. 689-700. ISSN 0894-0282

Nemri, Adnane, Saunders, Diane G O, Anderson, Claire, Upadhyaya, Narayana M., Win, Joe, Lawrence, Gregory J., Jones, David A., Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Ellis, Jeffrey G. and Dodds, Peter N. (2014) The genome sequence and effector complement of the flax rust pathogen Melampsora lini. Frontiers in Plant Science, 5 (MAR). ISSN 1664-462X

Malinovsky, Frederikke Gro, Batoux, Martine, Schwessinger, Benjamin, Youn, Ji Hyun, Stransfeld, Lena, Win, Joe, Kim, Seong-Ki and Zipfel, Cyril (2014) Antagonistic regulation of growth and immunity by the Arabidopsis basic helix-loop-helix transcription factor homolog of brassinosteroid enhanced expression2 interacting with increased leaf inclination1 binding bHLH1. Plant Physiology, 164 (3). pp. 1443-1455. ISSN 0032-0889

Lin, Kui, Limpens, Erik, Zhang, Zhonghua, Ivanov, Sergey, Saunders, Diane G O, Mu, Desheng, Pang, Erli, Cao, Huifen, Cha, Hwangho, Lin, Tao, Zhou, Qian, Shang, Yi, Li, Ying, Sharma, Trupti, van Velzen, Robin, de Ruijter, Norbert, Aanen, Duur K., Win, Joe, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Bisseling, Ton, Geurts, René and Huang, Sanwen (2014) Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus. PLoS Genetics, 10 (1). ISSN 1553-7390

Dong, Suomeng, Stam, Remco, Cano, Liliana M., Song, Jing, Sklenar, Jan, Yoshida, Kentaro, Bozkurt, Tolga O., Oliva, Ricardo, Liu, Zhenyu, Tian, Miaoying, Win, Joe, Banfield, Mark J., Jones, Alexandra M E, Van Der Hoorn, Renier A L and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2014) Effector specialization in a lineage of the Irish potato famine pathogen. Science, 343 (6170). pp. 552-555. ISSN 0036-8075

King, Stuart R F, McLellan, Hazel, Boevink, Petra C., Armstrong, Miles R., Bukharov, Tatyana, Sukarta, Octavina, Win, Joe, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Birch, Paul R J and Banfield, Mark J. (2014) Phytophthora infestans RXLR effector PexRD2 interacts with host MAPKKKε to suppress plant immune signaling. The Plant Cell, 26 (3). pp. 1345-1359. ISSN 1040-4651

Saunders, Diane G O, Win, Joe, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Raffaele, Sylvain (2014) Two-dimensional data binning for the analysis of genome architecture in filamentous plant pathogens and other eukaryotes. Methods in Molecular Biology, 1127. pp. 29-51. ISSN 1064-3745

Win, J, Chaparro-Garcia, A, Belhaj, K, Saunders, D G O, Yoshida, K, Dong, S, Schornack, S, Zipfel, C, Robatzek, S, Hogenhout, S A and Kamoun, S ORCID: https://orcid.org/0000-0002-0290-0315 (2012) Effector biology of plant-associated organisms:concepts and perspectives. Cold Spring Harbor Symposia on Quantitative Biology, 77. pp. 235-247. ISSN 1943-4456

Boutemy, Laurence S., King, Stuart R. F., Win, Joe, Hughes, Richard K., Clarke, Thomas A. ORCID: https://orcid.org/0000-0002-6234-1914, Blumenschein, Tharin M. A. ORCID: https://orcid.org/0000-0002-4932-5178, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Banfield, Mark J. (2011) Structures of Phytophthora RXLR effector proteins: a conserved but adaptable fold underpins functional diversity. Journal of Biological Chemistry, 286 (41). pp. 35834-35842. ISSN 0021-9258