Items where Research Group is "Environmental Biology

Article

Aghainajafi-Zadeh, S, Hemami, MR, Karami, M and Dolman, PM ORCID: https://orcid.org/0000-0002-9340-2791 (2010) Wintering habitat use by houbara bustard (Chlamydotis macqueenii) in steppes of Harat, central Iran. Journal of Arid Environments, 74 (8). pp. 912-917. ISSN 1095-922X

Allen, Zoë C., Shah, Nirmal J., Grant, Alastair ORCID: https://orcid.org/0000-0002-1147-2375, Derand, Gilles-David and Bell, Diana (2010) Hawksbill turtle monitoring in Cousin Island Special Reserve, Seychelles: an eight-fold increase in annual nesting numbers. Endangered Species Research, 11 (3). pp. 195-200. ISSN 1863-5407

Anstead, Lenka and Boar, Rosalind R. (2010) Willow spiling: review of streambank stabilisation projects in the UK. Freshwater Reviews, 3 (1). pp. 33-47.

Antony, Chakkiath Paul, Kumaresan, Deepak, Ferrando, Lucia, Boden, Rich, Moussard, Hélène, Scavino, Ana Fernández, Shouche, Yogesh S. and Murrell, J. Colin (2010) Active methylotrophs in the sediments of Lonar Lake, a saline and alkaline ecosystem formed by meteor impact. The ISME Journal, 4 (11). pp. 1470-1480. ISSN 1751-7362

Barlow, Jos, Ewers, Robert M., Anderson, Liana, Aragao, Luiz E. O. C., Baker, Tim R., Boyd, Emily, Feldpausch, Ted R., Gloor, Emanuel, Hall, Anthony, Malhi, Yadvinder, Milliken, William, Mulligan, Mark, Parry, Luke, Pennington, Toby, Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765, Phillips, Oliver L., Roman-Cuesta, Rosa Maria, Tobias, Joseph A. and Gardner, Toby A. (2010) Using learning networks to understand complex systems: a case study of biological, geophysical and social research in the Amazon. Biological Reviews, 86 (2). pp. 457-474. ISSN 1469-185X

Barlow, Jos, Gardner, Toby A., Louzada, Julio and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Measuring the conservation value of tropical primary forests: The effect of occasional species on estimates of biodiversity uniqueness. PLoS One, 5 (3). ISSN 1932-6203

Barlow, Jos, Louzada, Julio, Parry, Luke, Hernandez, Malva I. M., Hawes, Joseph, Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765, Val-de-Mello, Fernando Z. and Gardner, Toby A. (2010) Improving the design and management of forest strips in human-dominated tropical landscapes: A field test on Amazonian dung beetles. Journal of Applied Ecology, 47 (4). pp. 779-788. ISSN 1365-2664

Bayer-Giraldi, Maddalena, Uhlig, Christiane, John, Uwe, Mock, Thomas ORCID: https://orcid.org/0000-0001-9604-0362 and Valentin, Klaus (2010) Antifreeze proteins in polar sea ice diatoms: Diversity and gene expression in the genus Fragilariopsis. Environmental Microbiology, 12 (4). pp. 1041-1052. ISSN 1462-2920

Bi Fai, Patricia and Grant, Alastair ORCID: https://orcid.org/0000-0002-1147-2375 (2010) An assessment of the potential of the microbial assay for risk assessment (MARA) for ecotoxicological testing. Ecotoxicology, 19 (8). 1626–1633. ISSN 1573-3017

Bicknell, Jake and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Vertebrate population responses to reduced-impact logging in a neotropical forest. Forest Ecology and Management, 259 (12). pp. 2267-2275.

Boden, Rich, Kelly, Donovan P., Murrell, J. Colin and Schaefer, Hendrik (2010) Oxidation of dimethylsulfide to tetrathionate by Methylophaga thiooxidams: a new link in the sulphur cycle. Environmental Microbiology, 12 (10). pp. 2688-2699. ISSN 1462-2920

Breckels, Mark N., Boakes, Daniel E., Codling, Edward A., Malin, Gill ORCID: https://orcid.org/0000-0002-3639-9215, Archer, Stephen D. and Steinke, Michael (2010) Modelling the concentration of exuded dimethylsulphoniopropionate (DMSP) in the boundary layer surrounding phytoplankton cells. Journal of Plankton Research, 32 (2). pp. 253-257. ISSN 1464-3774

Burd, Adrian B., Hansell, Dennis A., Steinberg, Deborah K., Anderson, Thomas R., Arístegui, Javier, Baltar, Federico, Beaupre, Steven R., Buesseler, Ken O., DeHairs, Frank, Jackson, George A., Kadko, David C., Koppelmann, Rolf, Lampitt, Richard S., Nagata, Toshi, Reinthaler, Thomas, Robinson, Carol ORCID: https://orcid.org/0000-0003-3033-4565, Robison, Bruce H., Tamburini, Christian and Tanaka, Tsuneo (2010) Assessing the apparent imbalance between geochemical and biochemical indicators of meso- and bathypelagic biological activity: What the @#! is wrong with present calculations of carbon budgets? Deep-Sea Research Part II: Topical Studies in Oceanography, 57 (16). pp. 1557-1571. ISSN 1879-0100

Chen, Yin, Crombie, Andrew, Rahman, M. Tanvir, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Theisen, Andreas R., Murrell, J. Colin and Dunfield, Peter F. (2010) Complete genome sequence of the aerobic facultative methanotroph Methylocella silvestris BL2. Journal of Bacteriology, 192 (14). pp. 3840-3841. ISSN 0021-9193

Chen, Yin, McAleer, Kathryn L. and Murrell, J. Colin (2010) Monomethylamine as a nitrogen source for a nonmethylotrophic bacterium, Agrobacterium tumefaciens. Applied and Environmental Microbiology, 76 (12). pp. 4102-4104. ISSN 0099-2240

Chen, Yin and Murrell, J. Colin (2010) Methanotrophs and moss. Nature Geoscience, 3. pp. 595-596. ISSN 1752-0908

Chen, Yin and Murrell, J. Colin (2010) When metagenomics meets stable-isotope probing: progress and perspectives. Trends in Microbiology, 18 (4). pp. 157-163. ISSN 1878-4380

Chen, Yin, Scanlan, Julie, Song, Lijiang, Crombie, Andrew, Rahman, M. Tanvir, Schafer, Hendrik and Murrell, J. Colin (2010) y-Glutamylmethylamide is an essential intermediate in the metabolism of methylamine by Methylocella silvestris. Applied and Environmental Microbiology, 76 (13). pp. 4530-4537. ISSN 0099-2240

Cunliffe, Michael and Murrell, J. Colin (2010) Eukarya 18S rRNA gene diversity in the sea surface microlayer: implications for the structure of the neustonic microbial loop. The ISME Journal, 4 (3). pp. 455-458. ISSN 1751-7362

Derhe, Mia, Moss, Anna, Edwards, David, Carmenta, Rachel and Hassall, Mark (2010) Predicting the effect of climate change on aggregation behaviour in four species of terrestrial isopods. Behaviour, 147 (2). pp. 151-164. ISSN 1568-539X

Endo, Whaldener, Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765, Salas, Edith, Mori, Sandra, Sanchez-Vega, Jose-Luis, Shepard, Glenn H., Pacheco, Victor and Yu, Douglas W. (2010) Game vertebrate densities in hunted and nonhunted forest sites in Manu National Park, Peru. Biotropica, 42 (2). pp. 251-261. ISSN 1744-7429

Enever, R., Revill, A. S., Caslake, R. and Grant, A. ORCID: https://orcid.org/0000-0002-1147-2375 (2010) Discard mitigation increases skate survival in the Bristol Channel. Fisheries Research, 102 (1-2). pp. 9-15.

Galetti, Mauro, Pardini, Renata, Duarte, José M. B., da Silva, Vera M. F., Rossi, Alexandre and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Forest legislative changes and their impacts on mammal ecology and diversity in Brazil. Biota Neotropica, 10 (4). pp. 47-52.

Gardner, Toby A., Barlow, Jos, Sodhi, Navjot S. and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) A multi-region assessment of tropical forest biodiversity in a human-modified world. Biological Conservation, 143 (10). pp. 2293-2300.

Gilroy, J.J. ORCID: https://orcid.org/0000-0002-7597-5780, Anderson, G.Q.A., Grice, P.V., Vickery, J.A. and Sutherland, W.J. (2010) Mid-season shifts in the habitat associations of Yellow Wagtails Motacilla flava breeding in arable farmland. Ibis, 152 (1). pp. 90-104. ISSN 0019-1019

Haugaasen, Joanne M. Tuck, Haugaasen, Torbjørn, Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765, Gribel, Rogerio and Wegge, Per (2010) Seed dispersal of the Brazil nut tree (Bertholletia excelsa) by scatter-hoarding rodents in a central amazonian forest. Journal of Tropical Ecology, 26 (3). pp. 251-262. ISSN 1469-7831

Holt, Chas A., Fuller, Robert J. and Dolman, Paul M. ORCID: https://orcid.org/0000-0002-9340-2791 (2010) Experimental evidence that deer browsing reduces habitat suitability for breeding Common Nightingales Luscinia megarhynchos. Ibis, 152 (2). pp. 335-346. ISSN 1474-919X

Jiang, Hao, Chen, Yin, Jiang, Peixia, Zhang, Chong, Smith, Thomas J., Murrell, J. Colin and Xing, Xin-Hui (2010) Methanotrophs: Multifunctional bacteria with promising applications in environmental bioengineering. Biochemical Engineering Journal, 49 (3). pp. 277-288.

Krentz, Benjamin D., Mulheron, Heidi J., Semrau, Jeremy D., DiSpirito, Alan A., Bandow, Nathan L., Haft, Daniel H., Vuilleumier, Stéphane, Murrell, J. Colin, McEllistrem, Marcus T., Hartsel, Scott C. and Gallagher, Warren H. (2010) A comparison of methanobactins from Methylosinus trichosporium OB3b and Methylocystis strain SB2 predicts methanobactins are synthesized from diverse peptide precursors modified to create a common core for binding and reducing copper ions. Biochemistry, 49 (47). pp. 10117-10130. ISSN 0006-2960

Latawiec, Agnieszka E. and Reid, Brian J. ORCID: https://orcid.org/0000-0002-9613-979X (2010) Sequential extraction of polycyclic aromatic hydrocarbons using subcritical water. Chemosphere, 78 (8). pp. 1042-1048.

Latawiec, Agnieszka E., Simmons, Peter and Reid, Brian J. ORCID: https://orcid.org/0000-0002-9613-979X (2010) Decision-makers' perspectives on the use of bioaccessibility for risk-based regulation of contaminated land. Environment International, 36 (4). pp. 383-389. ISSN 1873-6750

Le Clainche, Yvonnick, Vézina, Alain F., Levasseur, Maurice, Cropp, Roger A., Gunson, Jim R., Vallina, Sergio M., Vogt, Meike, Lancelot, Christiane, Allen, J. Icarus, Archer, Stephen D., Bopp, Laurent, Deal, Clara, Elliott, Scott, Jin, Meibing, Malin, Gill ORCID: https://orcid.org/0000-0002-3639-9215, Schoemann, Véronique, Simó, Rafel, Six, Katharina D. and Stefels, Jacqueline (2010) A first appraisal of prognostic ocean DMS models and prospects for their use in climate models. Global Biogeochemical Cycles, 24 (3). ISSN 0886-6236

Lees, Alexander C. and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Habitat and life history determinants of antbird occurrence in variable-sized Amazonian forest fragments. Biotropica, 42 (5). pp. 614-621. ISSN 1744-7429

Louzada, Julio, Gardner, Toby, Peres, Carlos ORCID: https://orcid.org/0000-0002-1588-8765 and Barlow, Jos (2010) A multi-taxa assessment of nestedness patterns across a multiple-use Amazonian forest landscape. Biological Conservation, 143 (5). pp. 1102-1109.

Maheswari, Uma, Jabbari, Kamel, Petit, Jean Louis, Porcel, Betina M., Allen, Andrew E., Cadoret, Jean Paul, De Martino, Alessandra, Heijde, Marc, Kaas, Raymond, La Roche, Julie, Lopez, Pascal J., Martin-Jézéquel, Véronique, Meichenin, Agnès, Mock, Thomas ORCID: https://orcid.org/0000-0001-9604-0362, Schnitzler Parker, Micaela, Vardi, Assaf, Armbrust, E. Virginia, Weissenbach, Jean, Katinka, Michaël and Bowler, Chris (2010) Digital expression profiling of novel diatom transcripts provides insight into their biological functions. Genome Biology, 11 (8). ISSN 1474-760X

Mayilswami, Srinithi and Reid, Brian ORCID: https://orcid.org/0000-0002-9613-979X (2010) Effect of earthworms on nutrients dynamics in soil and growth of crop. Research Journal of Chemistry and Environment, 14 (2). pp. 39-44.

Michalski, Fernanda, Metzger, Jean Paul and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Rural property size drives patterns of upland and riparian forest retention in a tropical deforestation frontier. Global Environmental Change-Human and Policy Dimensions, 20 (4). pp. 705-712.

Michalski, Fernanda, Norris, Darren and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) No return from biodiversity loss. Science, 329 (5997). p. 1282. ISSN 1095-9203

Norris, Darren, Michalski, Fernanda and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Habitat patch size modulates terrestrial mammal activity patterns in Amazonian forest fragments. Journal of Mammalogy, 91 (3). pp. 551-560.

Parry, Luke, Day, Brett, Amaral, Silvana and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Drivers of rural exodus from Amazonian headwaters. Population and Environment, 32 (2). pp. 137-176. ISSN 1573-7810

Parry, Luke, Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765, Day, Brett and Amaral, Silvana (2010) Rural-urban migration brings conservation threats and opportunities to Amazonian watersheds. Conservation Letters, 3 (4). pp. 251-259.

Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765, Gardner, Toby A., Barlow, Jos, Zuanon, Jansen, Michalski, Fernanda, Lees, Alexander C., Vieira, Ima C. G., Moreira, Fatima M. S. and Feeley, Kenneth J. (2010) Biodiversity conservation in human-modified Amazonian forest landscapes. Biological Conservation, 143 (10). pp. 2314-2327.

Robinson, Carol ORCID: https://orcid.org/0000-0003-3033-4565, Steinberg, Deborah K., Anderson, Thomas R., Aristegui, Javier, Carlson, Craig A., Frost, Jessica R., Ghiglione, Jean-François, Hernandez-Leon, Santiago, Jackson, George A., Koppelmann, Rolf, Queguier, Bernard, Ragueneau, Olivier, Rassoulzadegan, Fereidoun, Robison, Bruce H., Tamburini, Christian, Tanaka, Tsuneo, Wishner, Karen F. and Zhang, Jing (2010) Mesopelagic zone ecology and biogeochemistry - A synthesis. Deep-Sea Research Part II: Topical Studies in Oceanography, 57 (16). pp. 1504-1518. ISSN 1879-0100

Sampaio, Ricardo, Lima, Albertina P., Magnusson, William E. and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Long-term persistence of midsized to large-bodied mammals in Amazonian landscapes under varying contexts of forest cover. Biodiversity and Conservation, 19 (8). pp. 2421-2439. ISSN 0960-3115

Stein, Lisa Y., Yoon, Sukhwan, Semrau, Jeremy D., DiSpirito, Alan A., Crombie, Andrew, Murrell, J. Colin, Vuilleumier, Stéphane, Kalyuzhnaya, Marina G., op den Camp, Huub J. M., Bringel, Françoise, Bruce, D., Cheng, J.-F., Copeland, A., Goodwin, Lynne, Han, Shunsheng, Hauser, Loren, Jetten, Mike S. M., Lajus, Aurélie, Land, M. L., Lapidus, A., Lucas, S., Médigue, Claudine, Pitluck, S., Woyke, Tanja, Zeytun, Ahmet and Klotz, Martin G. (2010) Genome sequence of the obligate methanotroph Methylosinus trichosporium strain OB3b. Journal of Bacteriology, 192 (24). pp. 6497-6498. ISSN 0021-9193

Strassburg, Bernardo B.N., Kelly, Annabel, Balmford, Andrew, Davies, Richard G., Gibbs, Holly K., Lovett, Andrew ORCID: https://orcid.org/0000-0003-0554-9273, Miles, Lera, Orme, C. David L., Price, Jeff, Turner, R. Kerry and Rodrigues, Ana S.L. (2010) Global congruence of carbon storage and biodiversity in terrestrial ecosystems. Conservation Letters, 3 (2). pp. 98-105.

Tabarelli, M, Aguiar, AV, Girao, LC, Peres, CA ORCID: https://orcid.org/0000-0002-1588-8765 and Lopes, AV (2010) Effects of pioneer tree species hyperabundance on forest fragments in Northeastern Brazil. Conservation Biology, 24 (6). pp. 1654-1663. ISSN 1523-1739

Tabarelli, M., Lopes, A. V., Girao, L. C., Santos, B. A. and Peres, C. A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Pervasive pioneer hyper-abundance drivers floristic shifts in long-term Atlantic Forest isolates. Conservation Biology, 24. pp. 1654-1663. ISSN 1523-1739

Tabarelli, Marcelo, Aguiar, Antonio Venceslau, Ribeiro, Milton Cezar, Metzger, Jean Paul and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Prospects for biodiversity conservation in the Atlantic Forest: Lessons from aging human-modified landscapes. Biological Conservation, 143 (10). pp. 2328-2340.

Tamas, Ivica, Dedysh, Svetlana N., Liesack, Werner, Stott, Matthew B., Alam, Maqsudul, Murrell, J. Colin and Dunfield, Peter F. (2010) Complete Genome Sequence of Beijerinckia indica subsp. indica. Journal of Bacteriology, 192 (17). pp. 4532-4533. ISSN 0021-9193

Todd, Jonathan D., Curson, Andrew R. J., Nikolaidou-Katsaraidou, Nefeli, Brearley, Charles A. ORCID: https://orcid.org/0000-0001-6179-9109, Watmough, Nicholas J., Chan, Yohan, Bulman Page, Philip C., Sun, Lei and Johnston, Andrew W. B. (2010) Molecular dissection of bacterial acrylate catabolism - unexpected links with dimethylsulfoniopropionate catabolism and dimethyl sulfide production. Environmental Microbiology, 12 (2). pp. 327-343. ISSN 1462-2920

Warren, Rachel ORCID: https://orcid.org/0000-0002-0122-1599, Price, Jeff, Fischlin, Andreas, de la Nava Santos, Santiago and Midgley, Guy (2010) Increasing impacts of climate change upon ecosystems with increasing global mean temperature rise. Climatic Change, 106 (2). pp. 141-177. ISSN 1573-1480

Wright, H. L., Buckingham, D. L. and Dolman, P. M. ORCID: https://orcid.org/0000-0002-9340-2791 (2010) Dry season habitat use by critically endangered white-shouldered ibis in northern Cambodia. Animal Conservation, 13 (1). pp. 71-79. ISSN 1469-1795

Wright, Hugh L., Vorsak, Bou, Collar, Nigel J., Gray, Thomas N. E., Lake, Iain R. ORCID: https://orcid.org/0000-0003-4407-5357, Phearun, Sum, Rainey, Hugo J., Vann, Rours, Ko, Sok and Dolman, Paul M. ORCID: https://orcid.org/0000-0002-9340-2791 (2010) Establishing a national monitoring programme for white-shouldered Ibis in Cambodia. Ibis, 152 (1). pp. 206-208. ISSN 1474-919X

Book Section

Chen, Y, Vorha, J and Murrell, JC (2010) Applications of DNA stable isotope probing in bioremediation studies. In: Methods in Molecular Microbiology. Humana Press Inc, NJ, USA, pp. 129-139.

Endo, W, Peres, CA ORCID: https://orcid.org/0000-0002-1588-8765, Rebelo, GH, Baniwa, ER, Shepard, JR and Mesquita, RCG (2010) Padrões de uso da vida Silvestre entre os Baniwa: sustentabilidade da caca no Médio Rio Içana. In: Manejo do Mundo: Conhecimentos e Praticas dos Povos Indigenas do Rio Negro Noroeste Amazonico. Instituto Socioambiental, Brasília, pp. 115-121.

Grant, A ORCID: https://orcid.org/0000-0002-1147-2375 (2010) Detecting ecological effects of pollutants in the aquatic environment. In: Ecology of Industrial Pollution. Cambridge University Press, UK, pp. 147-161.

Latawiec, AE, Simmons, P and Reid, BJ ORCID: https://orcid.org/0000-0002-9613-979X (2010) Progress in embedding bioavailability/bioaccessibility within decision-support practices for contaminated land risk and bioremediation appraisal. In: Trends in Bioremediation and Phytoremediation. Research Signpost, Kerala, pp. 11-22.

de Thoisy, Benoit, Richard-Hansen, Cecile and Peres, Carlos A. ORCID: https://orcid.org/0000-0002-1588-8765 (2010) Impacts of subsistence hunting on neotropical primates. In: South American Primates. Springer, pp. 389-412. ISBN 978-0-387-78704-6