Items where Research Group is "Plant Sciences

Article

Alfred, Jane, Dangl, Jeffery L., Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and McCouch, Susan R. (2014) New horizons for plant translational research. PLoS Biology, 12 (6). ISSN 1545-7885

Asai, Shuta, Rallapalli, Ghanasyam, Piquerez, Sophie J M, Caillaud, Marie-Cécile, Furzer, Oliver J, Ishaque, Naveed, Wirthmueller, Lennart, Fabro, Georgina, Shirasu, Ken and Jones, Jonathan D G (2014) Expression profiling during arabidopsis/downy mildew interaction reveals a highly-expressed effector that attenuates responses to salicylic acid. PLoS Pathogens, 10 (10). ISSN 1553-7374

Balk, Janneke and Schaedler, Theresia A (2014) Iron cofactor assembly in plants. Annual Review of Plant Biology, 65. pp. 125-153. ISSN 1545-2123

Borrill, Philippa, Connorton, James M., Balk, Janneke, Miller, Anthony J., Sanders, Dale and Uauy, Cristobal (2014) Biofortification of wheat grain with iron and zinc:Integrating novel genomic resources and knowledge from model crops. Frontiers in Plant Science, 5. ISSN 1664-462X

Bozkurt, Tolga O., Richardson, Annis, Dagdas, Yasin F., Mongrand, Sébastien, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Raffaele, Sylvain (2014) The plant membrane-associated REMORIN1.3 accumulates in discrete perihaustorial domains and enhances susceptibility to Phytophthora infestans. Plant Physiology, 165 (3). pp. 1005-1018. ISSN 0032-0889

Dong, Suomeng, Stam, Remco, Cano, Liliana M., Song, Jing, Sklenar, Jan, Yoshida, Kentaro, Bozkurt, Tolga O., Oliva, Ricardo, Liu, Zhenyu, Tian, Miaoying, Win, Joe, Banfield, Mark J., Jones, Alexandra M E, Van Der Hoorn, Renier A L and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2014) Effector specialization in a lineage of the Irish potato famine pathogen. Science, 343 (6170). pp. 552-555. ISSN 0036-8075

Etherington, Graham J, Monaghan, Jacqueline, Zipfel, Cyril and MacLean, Dan (2014) Mapping mutations in plant genomes with the user-friendly web application CandiSNP. Plant Methods, 10 (1). p. 41. ISSN 1746-4811

Etzold, Sabrina, Kober, Olivia I., Mackenzie, Donald A., Tailford, Louise E., Gunning, A. Patrick, Walshaw, John, Hemmings, Andrew M. ORCID: https://orcid.org/0000-0003-3053-3134 and Juge, Nathalie (2014) Structural basis for adaptation of lactobacilli to gastrointestinal mucus. Environmental Microbiology, 16 (3). pp. 888-903. ISSN 1462-2912

Etzold, Sabrina, Mackenzie, Donald A., Jeffers, Faye, Walshaw, John, Roos, Stefan, Hemmings, Andrew M. ORCID: https://orcid.org/0000-0003-3053-3134 and Juge, Nathalie (2014) Structural and molecular insights into novel surface-exposed mucus adhesins from Lactobacillus reuteri human strains:A novel mucus adhesin from Lactobacillus reuteri. Molecular Microbiology, 92 (3). pp. 543-556. ISSN 0950-382X

Fricke, Claudia, Green, Darrell ORCID: https://orcid.org/0000-0002-0217-3322, Smith, Damian, Dalmay, Tamas ORCID: https://orcid.org/0000-0003-1492-5429 and Chapman, Tracey (2014) MicroRNAs influence reproductive responses by females to male sex peptide in Drosophila melanogaster. Genetics, 198 (4). pp. 1603-1619. ISSN 1943-2631

Giannakopoulou, Artemis, Schornack, Sebastian, Bozkurt, Tolga O., Haart, Dave, Ro, Dae Kyun, Faraldos, Juan A., Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and O'Maille, Paul E. (2014) Variation in capsidiol sensitivity between phytophthora infestans and phytophthora capsici is consistent with their host range. PLoS One, 9 (9). ISSN 1932-6203

Halter, Thierry, Imkampe, Julia, Mazzotta, Sara, Wierzba, Michael, Postel, Sandra, Bücherl, Christoph, Kiefer, Christian, Stahl, Mark, Chinchilla, Delphine, Wang, Xiaofeng, Nürnberger, Thorsten, Zipfel, Cyril, Clouse, Steven, Borst, Jan Willem, Boeren, Sjef, de Vries, Sacco C, Tax, Frans and Kemmerling, Birgit (2014) The leucine-rich repeat receptor kinase BIR2 is a negative regulator of BAK1 in plant immunity. Current Biology, 24 (2). pp. 134-143. ISSN 0960-9822

Hooks, Mark M, Allwood, J William, Harrison, Joanna K.D., Kopka, Joachim, Erban, Alexander, Goodacre, Royston and Balk, Janneke (2014) Selective induction and subcellular distribution of ACONITASE 3 reveal the importance of cytosolic citrate metabolism during lipid mobilization in Arabidopsis. Biochemical Journal, 463 (2). 309–317. ISSN 0264-6021

Jefferson, Matthew, Donaszi-Ivanov, Andras, Pollen, Sean, Dalmay, Tamas ORCID: https://orcid.org/0000-0003-1492-5429, Saalbach, Gerhard and Powell, Penny P. ORCID: https://orcid.org/0000-0002-5347-0490 (2014) Host factors interacting with the pestivirus N erminal protease, Npro are components of the ribonucleoprotein complex. Journal of Virology, 88 (18). pp. 10340-10353. ISSN 0022-538X

Jones, J. D. G., Witek, K., Verweij, W., Jupe, F., Cooke, David, Dorling, S., Tomlinson, L., Smoker, M., Perkins, S. and Foster, S. (2014) Elevating crop disease resistance with cloned genes. Philosophical Transactions of the Royal Society B: Biological Sciences, 369 (1639). ISSN 0962-8436

Kadota, Yasuhiro, Sklenar, Jan, Derbyshire, Paul, Stransfeld, Lena, Asai, Shuta, Ntoukakis, Vardis, Jones, Jonathan Dg, Shirasu, Ken, Menke, Frank ORCID: https://orcid.org/0000-0003-2490-4824, Jones, Alexandra and Zipfel, Cyril (2014) Direct regulation of the NADPH oxidase RBOHD by the PRR-associated kinase BIK1 during plant immunity. Molecular Cell, 54 (1). pp. 43-55. ISSN 1097-2765

King, Stuart R F, McLellan, Hazel, Boevink, Petra C., Armstrong, Miles R., Bukharov, Tatyana, Sukarta, Octavina, Win, Joe, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Birch, Paul R J and Banfield, Mark J. (2014) Phytophthora infestans RXLR effector PexRD2 interacts with host MAPKKKε to suppress plant immune signaling. The Plant Cell, 26 (3). pp. 1345-1359. ISSN 1040-4651

Krüssel, Lena, Junemann, Johannes, Wirtz, Markus, Birke, Hannah, Thornton, Jeremy D., Browning, Luke W., Poschet, Gernot, Hell, Rüdiger, Balk, Janneke, Braun, Hans-Peter and Hildebrandt, Tatjana (2014) The mitochondrial sulfur dioxygenase ETHE1 is required for amino acid catabolism during carbohydrate starvation and embryo development in Arabidopsis thaliana. Plant Physiology, 165 (1). pp. 92-104. ISSN 0032-0889

Lee, Hyun Ah, Kim, Shin Young, Oh, Sang Keun, Yeom, Seon In, Kim, Saet Byul, Kim, Myung Shin, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Choi, Doil (2014) Multiple recognition of RXLR effectors is associated with nonhost resistance of pepper against Phytophthora infestans. New Phytologist, 203 (3). pp. 926-938. ISSN 0028-646X

Lin, Kui, Limpens, Erik, Zhang, Zhonghua, Ivanov, Sergey, Saunders, Diane G O, Mu, Desheng, Pang, Erli, Cao, Huifen, Cha, Hwangho, Lin, Tao, Zhou, Qian, Shang, Yi, Li, Ying, Sharma, Trupti, van Velzen, Robin, de Ruijter, Norbert, Aanen, Duur K., Win, Joe, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Bisseling, Ton, Geurts, René and Huang, Sanwen (2014) Single nucleus genome sequencing reveals high similarity among nuclei of an endomycorrhizal fungus. PLoS Genetics, 10 (1). ISSN 1553-7390

Lloyd, Simon R, Schoonbeek, Henk-Jan, Trick, Martin, Zipfel, Cyril and Ridout, Christopher J (2014) Methods to study PAMP-triggered immunity in Brassica species. Molecular Plant-Microbe Interactions, 27 (3). pp. 286-295. ISSN 0894-0282

Lopez-Gomollon, Sara, Beckers, Matthew, Rathjen, Tina, Moxon, Simon ORCID: https://orcid.org/0000-0003-4644-1816, Maumus, Florian, Mohorianu, Irina, Moulton, Vincent ORCID: https://orcid.org/0000-0001-9371-6435, Dalmay, Tamas ORCID: https://orcid.org/0000-0003-1492-5429 and Mock, Thomas ORCID: https://orcid.org/0000-0001-9604-0362 (2014) Global discovery and characterization of small non-coding RNAs in marine microalgae. BMC Genomics, 15 (1). ISSN 1471-2164

Macho, Alberto P, Schwessinger, Benjamin, Ntoukakis, Vardis, Brutus, Alexandre, Segonzac, Cécile, Roy, Sonali, Kadota, Yasuhiro, Oh, Man-Ho, Sklenar, Jan, Derbyshire, Paul, Lozano-Durán, Rosa, Malinovsky, Frederikke Gro, Monaghan, Jacqueline, Menke, Frank L ORCID: https://orcid.org/0000-0003-2490-4824, Huber, Steven C, He, Sheng Yang and Zipfel, Cyril (2014) A bacterial tyrosine phosphatase inhibits plant pattern recognition receptor activation. Science, 343 (6178). pp. 1509-1512. ISSN 0036-8075

Macho, Alberto P and Zipfel, Cyril (2014) Plant PRRs and the activation of innate immune signaling. Molecular Cell, 54 (2). pp. 263-272. ISSN 1097-2765

Malinovsky, Frederikke Gro, Batoux, Martine, Schwessinger, Benjamin, Youn, Ji Hyun, Stransfeld, Lena, Win, Joe, Kim, Seong-Ki and Zipfel, Cyril (2014) Antagonistic regulation of growth and immunity by the Arabidopsis basic helix-loop-helix transcription factor homolog of brassinosteroid enhanced expression2 interacting with increased leaf inclination1 binding bHLH1. Plant Physiology, 164 (3). pp. 1443-1455. ISSN 0032-0889

Monaghan, Jacqueline, Matschi, Susanne, Shorinola, Oluwaseyi, Rovenich, Hanna, Matei, Alexandra, Segonzac, Cécile, Malinovsky, Frederikke Gro, Rathjen, John P, MacLean, Dan, Romeis, Tina and Zipfel, Cyril (2014) The calcium-dependent protein kinase CPK28 buffers plant immunity and regulates BIK1 turnover. Cell Host & Microbe, 16 (5). pp. 605-15. ISSN 1931-3128

Nemri, Adnane, Saunders, Diane G O, Anderson, Claire, Upadhyaya, Narayana M., Win, Joe, Lawrence, Gregory J., Jones, David A., Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315, Ellis, Jeffrey G. and Dodds, Peter N. (2014) The genome sequence and effector complement of the flax rust pathogen Melampsora lini. Frontiers in Plant Science, 5 (MAR). ISSN 1664-462X

Petre, Benjamin and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2014) How do filamentous pathogens deliver effector proteins into plant cells? PLoS Biology, 12 (2). ISSN 1544-9173

Prince, David C., Drurey, Claire, Zipfel, Cyril and Hogenhout, Saskia A. (2014) The leucine-rich repeat receptor-like kinase BRASSINOSTEROID INSENSITIVE1-ASSOCIATED KINASE1 and the cytochrome P450 PHYTOALEXIN DEFICIENT3 contribute to innate immunity to aphids in Arabidopsis. Plant Physiology, 164 (4). pp. 2207-2219. ISSN 0032-0889

Rallapalli, Ghanasyam, Kemen, Eric M, Robert-Seilaniantz, Alexandre, Segonzac, Cécile, Etherington, Graham J, Sohn, Kee Hoon, MacLean, Daniel and Jones, Jonathan D G (2014) EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics. BMC Genomics, 15. ISSN 1471-2164

Saunders, Diane G O, Win, Joe, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Raffaele, Sylvain (2014) Two-dimensional data binning for the analysis of genome architecture in filamentous plant pathogens and other eukaryotes. Methods in Molecular Biology, 1127. pp. 29-51. ISSN 1064-3745

Schaedler, Theresia A, Thornton, Jeremy D, Kruse, Inga, Schwarzländer, Markus, Meyer, Andreas J, van Veen, Hendrik W and Balk, Janneke (2014) A conserved mitochondrial ATP-binding cassette transporter exports glutathione polysulfide for cytosolic metal cofactor assembly. Journal of Biological Chemistry, 289. pp. 23264-23274. ISSN 0021-9258

Segonzac, Cécile, Macho, Alberto P, Sanmartín, Maite, Ntoukakis, Vardis, Sánchez-Serrano, José Juan and Zipfel, Cyril (2014) Negative control of BAK1 by protein phosphatase 2A during plant innate immunity. The EMBO Journal, 33 (18). pp. 2069-79. ISSN 0261-4189

Segretin, María Eugenia, Pais, Marina, Franceschetti, Marina, Chaparro-Garcia, Angela, Bos, Jorunn I B, Banfield, Mark J. and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2014) Single amino acid mutations in the potato immune receptor R3a expand response to Phytophthora effectors. Molecular Plant-Microbe Interactions, 27 (7). pp. 624-637. ISSN 0894-0282

Sohn, Kee Hoon, Segonzac, Cécile, Rallapalli, Ghanasyam, Sarris, Panagiotis F., Woo, Joo Yong, Williams, Simon J., Newman, Toby E., Paek, Kyung Hee, Kobe, Bostjan and Jones, Jonathan D. G. (2014) The nuclear immune receptor RPS4 is required for RRS1SLH1-dependent constitutive defense activation in Arabidopsis thaliana. PLoS Genetics, 10 (10). ISSN 1553-7404

Stentz, Régis, Osborne, Samantha, Horn, Nikki, Li, Arthur, Hautefort, Isabelle, Bongaerts, Roy, Rouyer, Marine, Bailey, Paul, Shears, Stephen B., Hemmings, Andrew ORCID: https://orcid.org/0000-0003-3053-3134, Brearley, Charles A. ORCID: https://orcid.org/0000-0001-6179-9109 and Carding, Simon (2014) A bacterial homolog of a eukaryotic inositol phosphate signaling enzyme mediates cross-kingdom dialog in the mammalian gut. Cell Reports, 6 (4). pp. 646-656. ISSN 2211-1247

Trdá, Lucie, Fernandez, Olivier, Boutrot, Freddy, Héloir, Marie-Claire, Kelloniemi, Jani, Daire, Xavier, Adrian, Marielle, Clément, Christophe, Zipfel, Cyril, Dorey, Stéphan and Poinssot, Benoit (2014) The grapevine flagellin receptor VvFLS2 differentially recognizes flagellin-derived epitopes from the endophytic growth-promoting bacterium Burkholderia phytofirmans and plant pathogenic bacteria. New Phytologist, 201 (4). pp. 1371-1384. ISSN 0028-646X

Trost, Gerda, Vi, Son Lang, Czesnick, Hjördis, Lange, Peggy, Holton, Nick, Giavalisco, Patrick, Zipfel, Cyril, Kappel, Christian and Lenhard, Michael (2014) Arabidopsis poly(A) polymerase PAPS1 limits founder-cell recruitment to organ primordia and suppresses the salicylic acid-independent immune response downstream of EDS1/PAD4. The Plant Journal, 77 (5). pp. 688-699. ISSN 1365-313X

Williams, Simon J., Sohn, Kee Hoon, Wan, Li, Bernoux, Maud, Sarris, Panagiotis F., Segonzac, Cecile, Ve, Thomas, Ma, Yan, Saucet, Simon B., Ericsson, Daniel J., Casey, Lachlan W., Lonhienne, Thierry, Winzor, Donald J., Zhang, Xiaoxiao, Coerdt, Anne, Parker, Jane E., Dodds, Peter N., Kobe, Bostjan and Jones, Jonathan D. G. (2014) Structural basis for assembly and function of a heterodimeric plant immune receptor. Science, 344 (6181). pp. 299-303. ISSN 0036-8075

Wolf, Sebastian, van der Does, Dieuwertje, Ladwig, Friederike, Sticht, Carsten, Kolbeck, Andreas, Schürholz, Ann-Kathrin, Augustin, Sebastian, Keinath, Nana, Rausch, Thomas, Greiner, Steffen, Schumacher, Karin, Harter, Klaus, Zipfel, Cyril and Höfte, Herman (2014) A receptor-like protein mediates the response to pectin modification by activating brassinosteroid signaling. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 111 (42). pp. 15261-6. ISSN 1091-6490

Xu, Ping, Mohorianu, Irina, Yang, Li, Zhao, Hansheng, Gao, Zhimin and Dalmay, Tamas ORCID: https://orcid.org/0000-0003-1492-5429 (2014) Small RNA profile in Moso bamboo root and leaf obtained by high definition adapters. PLoS One, 9 (7). ISSN 1932-6203

Yoshida, Kentaro, Burbano, Hernán A., Krause, Johannes, Thines, Marco, Weigel, Detlef and Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 (2014) Mining herbaria for plant pathogen genomes:Back to the future. PLoS Pathogens, 10 (4). ISSN 1553-7366

Zhao, X, Moates, G K, Wellner, N, Collins, S R A, Coleman, M J and Waldron, K W (2014) Chemical characterisation and analysis of the cell wall polysaccharides of duckweed (Lemna minor). Carbohydrate Polymers, 111. pp. 410-418. ISSN 1879-1344

Zipfel, Cyril (2014) Plant pattern-recognition receptors. Trends in Immunology, 35 (7). pp. 345-351. ISSN 1471-4906

Book Section

Beck, Martina, Zhou, Ji, Faulkner, Christine and Robatzek, Silke (2014) High-Throughput Imaging of Plant Immune Responses. In: Plant-Pathogen Interactions. Methods in Molecular Biology . Springer, pp. 67-80. ISBN 978-1-62703-985-7