Items where Research Group is "Wolfson Centre for Advanced Environmental Microbiology

Article

Bahram, Mohammad, Espenberg, Mikk, Pärn, Jaan, Lehtovirta-Morley, Laura, Anslan, Sten, Kasak, Kuno, Kõljalg, Urmas, Liira, Jaan, Maddison, Martin, Moora, Mari, Niinemets, Ülo, Öpik, Maarja, Pärtel, Meelis, Soosaar, Kaido, Zobel, Martin, Hildebrand, Falk, Tedersoo, Leho and Mander, Ülo (2022) Structure and function of the soil microbiome underlying N2O emissions from global wetlands. Nature Communications, 13 (1). ISSN 2041-1723

Duncan, Anthony, Barry, Kerrie, Daum, Chris, Eloe-Fadrosh, Emiley, Roux, Simon, Schmidt, Katrin, Tringe, Susannah G., Valentin, Klaus U., Varghese, Neha, Salamov, Asaf, Grigoriev, Igor V., Leggett, Richard M., Moulton, Vincent and Mock, Thomas (2022) Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans. Microbiome, 10. ISSN 2049-2618

Fang, Jie, Adams, Jonathan M., Deng, Yongcui, Zhu, Xinshu, Hernández, Marcela and Liu, Yongqin (2022) Propagule limitation affects the response of soil methane oxidizer community to increased salinity. Geoderma, 426. ISSN 0016-7061

Farhan Ul Haque, Muhammad, Hernández, Marcela, Crombie, Andrew T. and Murrell, J. Colin (2022) Identification of active gaseous-alkane degraders at natural gas seeps. The ISME Journal, 16 (7). 1705–1716. ISSN 1751-7362

Fremin, Brayon J., Bhatt, Ami S. and Kyrpides, Nikos C. and Global Phage Small Open Reading Frame (GP-SmORF) Consortium (2022) Thousands of small, novel genes predicted in global phage genomes. Cell Reports, 39 (12). ISSN 2211-1247

Gilbertson, Reuben, Langan, Emma and Mock, Thomas (2022) Diatoms and their microbiomes in complex and changing polar oceans. Frontiers in Microbiology, 13. ISSN 1664-302X

Jenner, Leon P., Crack, Jason C., Kurth, Julia M., Soldánová, Zuzana, Brandt, Linda, Sokol, Katarzyna P., Reisner, Erwin, Bradley, Justin M., Dahl, Christiane, Cheesman, Myles R. and Butt, Julea N. (2022) Reaction of thiosulfate dehydrogenase with a substrate mimic induces dissociation of the cysteine heme ligand giving insight into the mechanism of oxidative catalysis. Journal of the American Chemical Society, 144 (40). 18296–18304. ISSN 0002-7863

Jung, Man-Young, Sedlacek, Christopher J., Kits, K. Dimitri, Mueller, Anna J., Rhee, Sung-Keun, Hink, Linda, Nicol, Graeme W., Bayer, Barbara, Lehtovirta-Morley, Laura, Wright, Chloe, de la Torre, Jose R., Herbold, Craig W., Pjevac, Petra, Daims, Holger and Wagner, Michael (2022) Ammonia-oxidizing archaea possess a wide range of cellular ammonia affinities. The ISME Journal, 16. 272–283. ISSN 1751-7362

Kamikawa, Ryoma, Mochizuki, Takako, Sakamoto, Mika, Tanizawa, Yasuhiro, Nakayama, Takuro, Onuma, Ryo, Cenci, Ugo, Moog, Daniel, Speak, Samuel, Sarkozi, Krisztina, Toseland, Andrew, van Oosterhout, Cock, Oyama, Kaori, Kato, Misako, Kume, Keitaro, Kayama, Motoki, Azuma, Tomonori, Ishii, Ken-ichiro, Miyashita, Hideaki, Henrissat, Bernard, Lombard, Vincent, Win, Joe, Kamoun, Sophien, Kashiyama, Yuichiro, Mayama, Shigeki, Miyagishima, Shin-ya, Tanifuji, Goro, Mock, Thomas and Nakamura, Yasukazu (2022) Genome evolution of a nonparasitic secondary heterotroph, the diatom Nitzschia putrida. Science Advances, 8 (17). ISSN 2375-2548

Kleiner, Friedrich H., Helliwell, Katherine E., Chrachri, Abdul, Hopes, Amanda, Parry-Wilson, Hannah, Gaikwad, Trupti, Mieszkowska, Nova, Mock, Thomas, Wheeler, Glen L. and Brownlee, Colin (2022) Cold-induced [Ca2+]cyt elevations function to support osmoregulation in marine diatoms. Plant Physiology, 190 (2). pp. 1384-1399. ISSN 0032-0889

Kuek, Felicity W. I., Motti, Cherie A., Zhang, Jia, Cooke, Ira R., Todd, Jonathan D., Miller, David J., Bourne, David G. and Raina, Jean-Baptiste (2022) DMSP production by coral-associated bacteria. Frontiers in Marine Science, 9. ISSN 2296-7745

Laundon, Davis, Chrismas, Nathan, Bird, Kimberley, Thomas, Seth, Mock, Thomas and Cunliffe, Michael (2022) A cellular and molecular atlas reveals the basis of chytrid development. eLife, 11. ISSN 2050-084X

Li, Chun-Yang, Crack, Jason C., Newton-Payne, Simone, Murphy, Andrew R. J., Chen, Xiu-Lan, Pinchbeck, Benjamin J., Zhou, Shun, Williams, Beth T., Peng, Ming, Zhang, Xiao-Hua, Chen, Yin, Le Brun, Nick E., Todd, Jonathan D. and Zhang, Yu-Zhong (2022) Mechanistic insights into the key marine dimethylsulfoniopropionate synthesis enzyme DsyB/DSYB. mLife, 1 (2). pp. 114-130. ISSN 2770-100X

Liu, Jingli, Xue, Chun-Xu, Wang, Jinyan, Crombie, Andrew T., Carrión, Ornella, Johnston, Andrew W. B., Murrell, J. Colin, Liu, Ji, Zheng, Yanfen, Zhang, Xiao-Hua and Todd, Jonathan D. (2022) Oceanospirillales containing the DMSP lyase DddD are key utilisers of carbon from DMSP in coastal seawater. Microbiome, 10. ISSN 2049-2618

Mao, Xuewei, Chen, Jianwei, van Oosterhout, Cock, Zhang, Huan, Liu, Guangxing, Zhuang, Yunyun and Mock, Thomas (2022) Diversity, prevalence, and expression of cyanase genes (cynS) in planktonic marine microorganisms. The ISME Journal, 16 (2). 602–605. ISSN 1751-7362

Mock, Thomas, Boulton, William, Balmonte, John Paul, Barry, Kevin, Bertilsson, Stefan, Bowman, Jeff, Buck, Moritz, Bratbak, Gunnar, Chamberlain, Emelia J., Cunliffe, Michael, Creamean, Jessie, Ebenhöh, Oliver, Eggers, Sarah Lena, Fong, Allison A., Gardner, Jessie, Gradinger, Rolf, Granskog, Mats A., Havermans, Charlotte, Hill, Thomas, Hoppe, Clara J. M., Korte, Kerstin, Larsen, Aud, Müller, Oliver, Nicolaus, Anja, Oldenburg, Ellen, Popa, Ovidiu, Rogge, Swantje, Schäfer, Hendrik, Shoemaker, Katyanne, Snoeijs-Leijonmalm, Pauline, Torstensson, Anders, Valentin, Klaus, Vader, Anna, Barry, Kerrie, Chen, I.-M. A., Clum, Alicia, Copeland, Alex, Daum, Chris, Eloe-Fadrosh, Emiley, Foster, Brian, Foster, Bryce, Grigoriev, Igor V., Huntemann, Marcel, Ivanova, Natalia, Kuo, Alan, Kyrpides, Nikos C., Mukherjee, Supratim, Palaniappan, Krishnaveni, Reddy, T. B. K., Salamov, Asaf, Roux, Simon, Varghese, Neha, Woyke, Tanja, Wu, Dongying, Leggett, Richard M., Moulton, Vincent and Metfies, Katja (2022) Multiomics in the central Arctic Ocean for benchmarking biodiversity change. PLoS Biology, 20 (10). ISSN 1544-9173

Neri, Uri, Wolf, Yuri I., Roux, Simon, Camargo, Antonio Pedro, Lee, Benjamin, Kazlauskas, Darius, Chen, I. Min, Ivanova, Natalia, Zeigler Allen, Lisa, Paez-Espino, David, Bryant, Donald A., Bhaya, Devaki, Krupovic, Mart, Dolja, Valerian V., Kyrpides, Nikos C., Koonin, Eugene V., Gophna, Uri, Narrowe, Adrienne B., Probst, Alexander J., Sczyrba, Alexander, Kohler, Annegret, Séguin, Armand, Shade, Ashley, Campbell, Barbara J., Lindahl, Björn D., Reese, Brandi Kiel, Roque, Breanna M., Derito, Chris, Averill, Colin, Cullen, Daniel, Beck, David A. C., Walsh, David A., Ward, David M., Wu, Dongying, Eloe-Fadrosh, Emiley, Brodie, Eoin L., Young, Erica B., Lilleskov, Erik A., Castillo, Federico J., Martin, Francis M., Lecleir, Gary R., Attwood, Graeme T., Cadillo-Quiroz, Hinsby, Simon, Holly M., Hewson, Ian, Grigoriev, Igor V., Tiedje, James M., Jansson, Janet K., Lee, Janey, Vandergheynst, Jean S., Dangl, Jeff, Bowman, Jeff S., Blanchard, Jeffrey L., Bowen, Jennifer L., Xu, Jiangbing, Banfield, Jillian F., Deming, Jody W., Kostka, Joel E., Gladden, John M., Rapp, Josephine Z., Sharpe, Joshua, McMahon, Katherine D., Treseder, Kathleen K., Bidle, Kay D., Wrighton, Kelly C., Thamatrakoln, Kimberlee, Nusslein, Klaus, Meredith, Laura K., Ramirez, Lucia, Buee, Marc, Huntemann, Marcel, Kalyuzhnaya, Marina G., Waldrop, Mark P., Sullivan, Matthew B., Schrenk, Matthew O., Hess, Matthias, Vega, Michael A., O'Malley, Michelle A., Medina, Monica, Gilbert, Naomi E., Delherbe, Nathalie, Mason, Olivia U., Dijkstra, Paul, Chuckran, Peter F., Baldrian, Petr, Constant, Philippe, Stepanauskas, Ramunas, Daly, Rebecca A., Lamendella, Regina, Gruninger, Robert J., Mckay, Robert M., Hylander, Samuel, Lebeis, Sarah L., Esser, Sarah P., Acinas, Silvia G., Wilhelm, Steven S., Singer, Steven W., Tringe, Susannah S., Woyke, Tanja, Reddy, T. B. K., Bell, Terrence H., Mock, Thomas, McAllister, Tim, Thiel, Vera, Denef, Vincent J., Liu, Wen-Tso, Martens-Habbena, Willm, Allen Liu, Xiao-Jun, Cooper, Zachary S. and Wang, Zhong (2022) Expansion of the global RNA virome reveals diverse clades of bacteriophages. Cell, 185 (21). 4023-4037.e18. ISSN 0092-8674

Parejo Trevino, Sergio, Cabrera Rodriguez, Juan J., Jimenez-Levia, Andrea, Tomas-Gallardo, Laura, Bedmar, Eulogio J., Gates, Andrew J. and Mesa, Socorro (2022) Fine‐tuning modulation of oxidation-mediated posttranslational control of Bradyrhizobium diazoefficiens FixK2 transcription factor. International Journal of Molecular Sciences, 23 (9). ISSN 1661-6596

Peng, Ming, Li, Chun-Yang, Chen, Xiu-Lan, Williams, Beth, Kang, Li, Gao, Ya-Nan, Wang, Peng, Wang, Ning, Gao, Chao, Zhang, Shan, Schoelmerich, Marie C., Banfield, Jillian F., Miller, J. Benjamin, Le Brun, Nick E., Todd, Jonathan D. and Zhang, Yu-Zhong (2022) Insights into methionine S-methylation in diverse organisms. Nature Communications, 13. ISSN 2041-1723

Piper, Samuel E. H., Casadevall, Carla, Reisner, Erwin, Clarke, Thomas A., Jeuken, Lars J. C., Gates, Andrew J. and Butt, Julea N. (2022) Photocatalytic removal of the greenhouse gas nitrous oxide by liposomal microreactors. Angewandte Chemie-International Edition, 61 (41). ISSN 1433-7851

Rix, Gregory D., Sprigg, Colleen, Whitfield, Hayley, Hemmings, Andrew M., Todd, Jonathan D. and Brearley, Charles A. (2022) Characterisation of a soil MINPP phytase with remarkable long-term stability and activity from Acinetobacter sp. PLoS One, 17 (8). ISSN 1932-6203

Schatteman, Arne, Wright, Chloë L., Crombie, Andrew T., Murrell, J. Colin and Lehtovirta-Morley, Laura E. (2022) Hydrazines as substrates and inhibitors of the archaeal ammonia oxidation pathway. Applied and Environmental Microbiology, 88 (8). ISSN 0099-2240

Ye, Naihao, Han, Wentao, Toseland, Andrew, Wang, Yitao, Fan, Xiao, Xu, Dong, van Oosterhout, Cock, Grigoriev, Igor V., Tagliabue, Alessandro, Zhang, Jian, Zhang, Yan, Ma, Jian, Qiu, Huan, Li, Youxun, Zhang, Xiaowen and Mock, Thomas and Sea of Change Consortium (2022) The role of zinc in the adaptive evolution of polar phytoplankton. Nature Ecology & Evolution, 6 (7). pp. 965-978. ISSN 2397-334X

Book Section

Armbrust, E. Virginia, van Creveld, Shiri Graff, Falciatore, Angela and Mock, Thomas (2022) Preface. In: The Molecular Life of Diatoms. Springer, v-viii. ISBN 9783030924980

Mock, Thomas, Hodgkinson, Kat, Wu, Taoyang, Moulton, Vincent, Duncan, Anthony, Oosterhout, Cock van and Pichler, Monica (2022) Structure and Evolution of Diatom Nuclear Genes and Genomes. In: The Molecular Life of Diatoms. Springer, pp. 111-145. ISBN 9783030924980

Book

Falciatore, Angela and Mock, Thomas, eds. (2022) The Molecular Life of Diatoms. Springer. ISBN 978-3-030-92498-0