Items where Research Group is "Gastroenterology and Gut Biology

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AbuHassan, Kamal, Bakhori, Noremylia, Kusnin, Norzila, Azmi, Umi, Tania, Marzia, Evans, Benjamin ORCID: https://orcid.org/0000-0001-6849-9758, Yusof, Nor and Hossain, Alamgir (2017) Automatic diagnosis of tuberculosis disease based on Plasmonic ELISA and color-based image classification. In: Engineering in Medicine and Biology Society (EMBC), 2017 39th Annual International Conference of the IEEE. The Institute of Electrical and Electronics Engineers (IEEE). ISBN 978-1-5090-2810-8

Alcon-Giner, Cristina, Caim, Shabhonam, Mitra, Suparna, Ketskemety, Jennifer, Wegmann, Udo, Wain, John, Belteki, Gusztav, Clarke, Paul ORCID: https://orcid.org/0000-0001-6203-7632 and Hall, Lindsay J. ORCID: https://orcid.org/0000-0001-8938-5709 (2017) Optimisation of 16S rRNA gut microbiota profiling of extremely low birth weight infants. BMC Genomics, 18. ISSN 1471-2164

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Beaney, Alec J., Banim, Paul J. R., Luben, Robert, Lentjes, Marleen A. H., Khaw, Kay-Tee and Hart, Andrew R. (2017) Higher meat intakes are positively associated with higher risks of developing pancreatic cancer in an age-dependent manner and are modified by plasma anti-oxidants: A prospective cohort study (EPIC-Norfolk) using data from food diaries. Pancreas, 46 (5). pp. 672-678. ISSN 0885-3177

Bergmann, M. M., Hernandez, V., Bernigau, W., Boeing, H., Chan, S. S. M., Luben, R., Khaw, K-T, van Schaik, F., Oldenburg, B., Overvad, K., Palli, D., Masala, G., Carbonnel, F., Boutron-Ruault, M.-C., Olsen, A., Tjonneland, A., Kaaks, R., Katzke, V., Riboli, E. and Hart, A. (2017) No association of alcohol use and the risk of ulcerative colitis or Crohn’s disease: data from a European Prospective cohort study (EPIC). European Journal of Clinical Nutrition, 71 (4). pp. 512-518. ISSN 0954-3007

Biancheri, Paolo and Watson, Alastair ORCID: https://orcid.org/0000-0003-3326-0426 (2017) The relative contributions of the gut microbiome, host genetics, and environment to cytokine responses to microbial stimulation. Gastroenterology, 152 (8). 2068–2070. ISSN 0016-5085

Biancheri, Paolo and MacDonald, Thomas T. (2017) Matrix Metalloproteinases. In: Crohn's Disease and Ulcerative Colitis. Springer, pp. 135-140. ISBN 978-3-319-33701-2

Brooks, Johanne, Watson, Alastair ORCID: https://orcid.org/0000-0003-3326-0426 and Korcsmaros, Tamas (2017) Omics approaches to identify potential biomarkers of inflammatory diseases in the focal adhesion complex. Genomics, Proteomics & Bioinformatics, 15 (2). 101–109. ISSN 2210-3244

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Carding, S. R., Davis, N. and Hoyles, L. (2017) Review article: the human intestinal virome in health and disease. Alimentary Pharmacology and Therapeutics, 46 (9). 800–815. ISSN 0269-2813

Cepeda-Molero, Massiel, Berger, Cedric N., Walsham, Alistair D. S., Ellis, Samuel J., Wemyss-Holden, Simon, Schüller, Stephanie ORCID: https://orcid.org/0000-0003-3260-9112, Frankel, Gad and Fernández, Luis Ángel (2017) Attaching and effacing (A/E) lesion formation by enteropathogenic E. coli on human intestinal mucosa is dependent on non-LEE effectors. PLoS Pathogens, 13 (10). ISSN 1553-7374

Clements, Sarah J., Maijo, Monica, Ivory, Kamal, Nicoletti, Claudio and Carding, Simon R. (2017) Age-associated decline in dendritic cell function and the impact of Mediterranean diet intervention in elderly subjects. Frontiers in Nutrition, 4. ISSN 2296-861X

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Dong, Haohao, Zhang, Zhengyu, Tang, Xiaodi, Paterson, Neil G and Dong, Changjiang (2017) Structural and functional insights into the lipopolysaccharide ABC transporter LptB2FG. Nature Communications, 8. ISSN 2041-1723

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Filipović, Branka, Forbes, Alastair ORCID: https://orcid.org/0000-0001-7416-9843 and Tepeš, Bojan (2017) Current approaches to the functional gastrointestinal disorders. Gastroenterology Research and Practice, 2017. ISSN 1687-6121

Forbes, Alastair ORCID: https://orcid.org/0000-0001-7416-9843, Escher, Johanna, Hébuterne, Xavier, Kłęk, Stanisław, Krznaric, Zeljko, Schneider, Stéphane, Shamir, Raanan, Stardelova, Kalina, Wierdsma, Nicolette, Wiskin, Anthony E and Bischoff, Stephan C (2017) ESPEN Guideline: Clinical Nutrition in inflammatory bowel disease. Clinical Nutrition, 36 (2). 321–347. ISSN 0261-5614

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Goldspink, Deborah, Rookyard, Chris, Tyrrell, Benjamin, Gadsby, Jonathan, Perkins, James, Lund, Elizabeth ORCID: https://orcid.org/0000-0002-3269-3222, Galjart, Niels, Thomas, Paul, Wileman, Thomas and Mogensen, Mette (2017) Ninein is essential for apico-basal microtubule formation and CLIP-170 facilitates its redeployment to non-centrosomal microtubule organizing centres. Open Biology, 7 (160274).

Goldspink, Deborah A., Matthews, Zoe J., Lund, Elizabeth K. ORCID: https://orcid.org/0000-0002-3269-3222, Wileman, Tom and Mogensen, Mette M. (2017) Immuno-fluorescent labeling of microtubules and centrosomal proteins in ex vivo intestinal tissue and 3D in vitro intestinal organoids. Journal of Visualized Experiments, 130.

Gu, Yinghong, Zeng, Yi, Wang, Zhongshan and Dong, Changjiang (2017) BamA β16C strand and periplasmic turns are critical for outer membrane protein insertion and assembly. Biochemical Journal, 474 (23). pp. 3951-3961. ISSN 0264-6021

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Hews, Claire L., Tran, Seav-Ly, Wegmann, Udo, Brett, Bernard, Walsham, Alistair D. S., Kavanaugh, Devon, Ward, Nicole J., Juge, Nathalie and Schüller, Stephanie ORCID: https://orcid.org/0000-0003-3260-9112 (2017) The StcE metalloprotease of enterohaemorrhagic Escherichia coli reduces the inner mucus layer and promotes adherence to human colonic epithelium ex vivo. Cellular Microbiology, 19 (6). ISSN 1462-5814

Hughes, Kevin R., Harnisch, Lukas C., Alcon-Giner, Cristina, Mitra, Suparna, Wright, Chris J., Ketskemety, Jennifer, van Sinderen, Douwe, Watson, Alastair J. M. ORCID: https://orcid.org/0000-0003-3326-0426 and Hall, Lindsay J. ORCID: https://orcid.org/0000-0001-8938-5709 (2017) Bifidobacterium breve reduces apoptotic epithelial cell shedding in an exopolysaccharide and MyD88-dependent manner. Inflammatory Bowel Diseases, 7 (1). ISSN 1078-0998

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Jablonski, Artur, Matczak, Karolina, Koceva-Chyła, Aneta, Durka, Kamil, Steverding, Dietmar, Jakubiec-Krześniak, Katarzyna, Solecka, Jolanta, Trzybiński, Damian, Woźniak, Krzysztof, Andreu, Vanesa, Mendoza, Gracia, Arruebo, Manuel, Kochel, Krzysztof, Krawczyk, Barbara, Szczukocki, Dominik and Kowalski, Konrad (2017) Cymantrenyl-nucleobases: synthesis, anticancer, antitrypanosomal and antimicrobial activity studies. Molecules, 22 (12). ISSN 1420-3049

Jones, Emily J., Korcsmaros, Tamas and Carding, Simon R. (2017) Mechanisms and pathways of Toxoplasma gondii transepithelial migration. Tissue Barriers, 5 (1). ISSN 2168-8370

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Kelly, Steven, Ivens, Alasdair, Mott, G. Adam, O'Neill, Ellis, Emms, David, Macleod, Olivia, Voorheis, Paul, Tyler, Kevin ORCID: https://orcid.org/0000-0002-0647-8158, Clark, Matthew, Matthews, Jacqueline, Matthews, Keith and Carrington, Mark (2017) An alternative strategy for trypanosome survival in the mammalian bloodstream revealed through genome and transcriptome analysis of the ubiquitous bovine parasite Trypanosoma (Megatrypanum) theileri. Genome Biology and Evolution, 9 (8). 2093–2109. ISSN 1759-6653

King, Philippa, Robinson, Guy, Elwin, Kristin, Tyler, Kevin M. ORCID: https://orcid.org/0000-0002-0647-8158, Hunter, Paul R. and Chalmers, Rachel M. (2017) Prevalence and epidemiology of human Cryptosporidium parvum IIc infections in England and Wales. The Lancet, 389 (Supplement 1). S56. ISSN 0140-6736

Kiu, Raymond, Caim, Shabhonam, Alcon-Giner, Cristina, Belteki, Gustav, Clarke, Paul ORCID: https://orcid.org/0000-0001-6203-7632, Pickard, Derek, Dougan, Gordon and Hall, Lindsay J ORCID: https://orcid.org/0000-0001-8938-5709 (2017) Preterm infant-associated Clostridium tertium, Clostridium cadaveris and Clostridium paraputrificum strains: genomic and evolutionary insights. Genome Biology and Evolution, 9 (10). 2707–2714. ISSN 1759-6653

Kiu, Raymond, Caim, Shabhonam, Alexander, Sarah, Pachori, Purnima and Hall, Lindsay J. ORCID: https://orcid.org/0000-0001-8938-5709 (2017) Probing genomic aspects of the multi-host pathogen Clostridium perfringens reveals significant pangenome diversity, and a diverse array of virulence factors. Frontiers in Microbiology, 8. ISSN 1664-302X

Klek, Stanislaw, Chourdakis, Michael, Bischoff, Stephan, Dubrov, Sergiej, Forbes, Alastair ORCID: https://orcid.org/0000-0001-7416-9843, Galas, Aleksander, Genton, Laurence, Gundogdu, Haldun R., Irtun, Oivind, Jagmane, Ilze, Jakobson-Forbes, Triin, Jirka, Adam, Kennedy, Nicholas, Klimasauskas, Andrius, Khoroshilov, Igor, Leon-Sanz, Miguel, Muscaritoli, Maurizio, Panisic-Sekeljic, Marina, Poulia, Kalliopi Anna, Schneider, Stephane, Siljamäki-Ojansuu, Ulla, Uyar, Mehmet, Wanten, Geert and Krznaric, Zeljko (2017) Economy matters to fight against malnutrition: results from a multicenter survey. Clinical Nutrition, 36 (1). 162–169. ISSN 0261-5614

Koulouris, Andreas I., Banim, Paul and Hart, Andrew (2017) Pain in patients with pancreatic cancer: prevalence, mechanisms, management and future developments. Digestive Diseases and Sciences, 62 (4). 861–870. ISSN 0163-2116

Kowalski, Konrad, Szczupk, Lukasz, Saloman, Sebastian, Steverding, Dietmar, Jablonski, Artur, Vrcek, Valerije, Hildebrandt, Alexander, Lang, Heinrich and Rybarczyk-Pirek, Agnieszka (2017) Cymantrene, cyrhetrene and ferrocene nucleobase conjugates: Synthesis, structure, computational study, electrochemistry and antitrypanosomal activity. ChemPlusChem, 82 (2). pp. 303-314. ISSN 2192-6506

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Lam, Stephen ORCID: https://orcid.org/0000-0003-1040-938X and Hart, Andrew (2017) Does physical activity protect against the development of gastroesophageal reflux disease, Barrett’s oesophagus and oesophageal adenocarcinoma? A review of the literature with a meta-analysis. Diseases of the Esophagus, 30 (11). pp. 1-10. ISSN 1120-8694

Lamprinaki, Dimitra, Beasy, Gemma, Zhekova, Aleksandra, Wittmann, Alexandra, James, Steve, Dicks, Jo, Iwakura, Yoichiro, Saijo, Shinobu, Wang, Xiaomin, Chow, Chung-Wai, Roberts, Ian, Korcsmaros, Tamas, Mayer, Ulrike ORCID: https://orcid.org/0000-0003-2328-0052, Wileman, Thomas and Kawasaki, Norihito (2017) LC3-associated phagocytosis is required for dendritic cell inflammatory cytokine response to gut commensal yeast Saccharomyces cerevisiae. Frontiers in Immunology, 8. ISSN 1664-3224

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Maclaren, Oliver J., Parker, Aimée, Pin, Carmen, Carding, Simon R., Watson, Alastair J. M. ORCID: https://orcid.org/0000-0003-3326-0426, Fletcher, Alexander G., Byrne, Helen M. and Maini, Phillip K. (2017) A hierarchical Bayesian model for understanding the spatiotemporal dynamics of the intestinal epithelium. PLoS Computational Biology, 13 (7). ISSN 1553-734X

Mamusa, Marianna, Sitia, Leopoldo, Barbero, Francesco, Ruyra, Angels, Díaz Calvo, Teresa, Montis, Costanza, Gonzalez-Paredes, Ana, Wheeler, Grant N. ORCID: https://orcid.org/0000-0002-4335-8577, Morris, Christopher J. ORCID: https://orcid.org/0000-0002-7703-4474, McArthur, Michael and Berti, Debora (2017) Cationic liposomal vectors incorporating a bolaamphiphile for oligonucleotide antimicrobials. Biochimica et Biophysica Acta-Biomembranes, 1859 (10). 1767–1777. ISSN 0005-2736

Marín-Menéndez, Alejandro, Montis, Costanza, Díaz-Calvo, Teresa, Carta, Davide, Hatzixanthis, Kostas, Morris, Christopher J. ORCID: https://orcid.org/0000-0002-7703-4474, McArthur, Michael and Berti, Debora (2017) Antimicrobial nanoplexes meet model bacterial membranes: the key role of Cardiolipin. Scientific Reports, 7. ISSN 2045-2322

Miguel, Jennifer, Maxwell, Adrienne, Hsieh, Jonathon, Harnisch, Lukas, Alam, Denise Al, Polk, Brent, Lien, Ching-Ling, Watson, Alastair ORCID: https://orcid.org/0000-0003-3326-0426 and Frey, Mark R. (2017) Epidermal growth factor suppresses intestinal epithelial cell shedding both in vitro and in vivo via a MAPK dependent pathway. Journal of Cell Science, 130 (1). pp. 90-96. ISSN 0021-9533

Miller, Eric, Evans, Benjamin A ORCID: https://orcid.org/0000-0001-6849-9758, Cornejo, Omar E, Roberts, Ian S and Rozen, Daniel E (2017) Pherotype polymorphism in Streptococcus pneumoniae has no obvious effects on population structure and recombination. Genome Biology and Evolution, 9 (10). 2546–2559. ISSN 1759-6653

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Panišić-Šekeljić, Marina, Bezmarević, Mihailo and Forbes, Alastair ORCID: https://orcid.org/0000-0001-7416-9843 (2017) Total parenteral nutrition in twin pregnancy after suicide attempt with corrosive. Srpski arhiv za celokupno lekarstvo, 145 (7-8). pp. 411-414. ISSN 0370-8179

Parker, Aimee, Maclaren, Oliver J., Fletcher, Alexander G., Muraro, Daniele, Kreuzaler, Peter A., Byrne, Helen M., Maini, Philip K., Watson, Alastair J. M. ORCID: https://orcid.org/0000-0003-3326-0426 and Pin, Carmen (2017) Cell proliferation within small intestinal crypts is the principal driving force for cell migration on villi. The FASEB Journal, 31 (2). pp. 636-649. ISSN 0892-6638

Patterson, Angela and Watson, Alastair ORCID: https://orcid.org/0000-0003-3326-0426 (2017) Deciphering the complex signalling systems that regulate intestinal epithelial cell death processes and shedding. Frontiers in Immunology, 8. ISSN 1664-3224

Pournaras, Dimitri J., Photi, Evangelos S., Barnett, Nicholas, Challand, Christopher P., Chatzizacharias, Nikolaos A., Dlamini, Nokwanda P., Doulias, Triantafyllos, Foley, Aoibhinn, Hernon, James, Kumar, Bhaskar, Martin, Jack, Nunney, Ian, Panagiotopoulou, Ioanna, Sengupta, Neel, Shivakumar, Oshini, Sinclair, Piriyah, Stather, Phil, Than, Miriam M., Wells, Antonia C., Xanthis, Athanasios and Dhatariya, Ketan (2017) Assessing the quality of primary care referrals to surgery of patients with diabetes in the East of England: A multi-centre cross-sectional cohort study. International Journal of Clinical Practice, 71 (7). ISSN 1368-5031

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Qi, Xiaoxuan, Wang, Wenjian, Dong, Haohao, Liang, Yuying, Dong, Changjiang and Ly, Hinh (2017) Expression and X-Ray Structural Determination of the Nucleoprotein of Lassa Fever Virus. In: Hemorrhagic Fever Viruses. Hemorrhagic Fever Viruses . Humana Press, pp. 179-188. ISBN 978-1-4939-6980-7

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Ratcliffe, Sarah, Jugdaohsingh, Ravin, Vivancos, Julien, Marron, Alan, Deshmukh, Rupesh, Feng Ma, Jian, Mitani-Ueno, Namiki, Robertson, Jack, Wills, John, Boekschoten, Mark V, Muller, Michael ORCID: https://orcid.org/0000-0002-5930-9905, Mawhinney, Robert C, Kinrade, Stephen D, Isenring, Paul, Bélanger, Richard R and Powell, Jonathan (2017) Identification of a mammalian silicon transporter. American Journal of Physiology, 312 (5). C550-C561. ISSN 0002-9513

Rusli, Fenni, Lute, Carolien, Boekschoten, Mark V, van Dijk, Miriam, van Norren, Klaske, Menke, Aswin L, Müller, Michael ORCID: https://orcid.org/0000-0002-5930-9905 and Steegenga, Wilma T (2017) Intermittent calorie restriction largely counteracts the adverse health effects of a moderate-fat diet in aging C57BL/6J mice. Molecular Nutrition & Food Research, 61 (5). ISSN 1613-4125

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Soeters, P., Bozzetti, F., Cynober, L., Forbes, A. ORCID: https://orcid.org/0000-0001-7416-9843, Shenkin, A. and Sobotka, L. (2017) Defining malnutrition: a plea to rethink. Clinical Nutrition, 36 (3). 896–901. ISSN 0261-5614

Steegenga, Wilma T., Mischke, Mona, Lute, Carolien, Boekschoten, Mark V., Lendvai, Agnes, Pruis, Maurien G. M., Verkade, Henkjan J., van de Heijning, Bert J. M., Boekhorst, Jos, Timmerman, Harro M., Plösch, Torsten, Muller, Michael ORCID: https://orcid.org/0000-0002-5930-9905 and Hooiveld, Guido JEJ (2017) Maternal exposure to a Western-style diet causes differences in intestinal microbiota composition and gene expression of suckling mouse pups. Molecular Nutrition & Food Research, 61 (1). ISSN 1613-4125

Steverding, Dietmar (2017) The history of leishmaniasis. Parasites & Vectors, 10. ISSN 1756-3305

Steverding, Dietmar and Huczyński, Adam (2017) Trypanosoma brucei: trypanocidal and cell swelling activities of lasalocid acid. Parasitology Research, 116 (11). 3229–3233. ISSN 0932-0113

Steverding, Dietmar and Rushworth, Stuart A. (2017) Front-line glioblastoma chemotherapeutic temozolomide is toxic to Trypanosoma brucei and potently enhances melarsoprol and eflornithine. Experimental Parasitology, 178. 45–50. ISSN 0014-4894

Steverding, Dietmar (2017) Neue Methode zur Malariaimpfung erfolgreich getestet. Naturwissenschaftliche Rundschau, 70. pp. 205-206.

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Tomlinson, Matthew L., Butelli, Eugenio, Martin, Cathie and Carding, Simon R. (2017) Flavonoids from engineered tomatoes inhibit gut barrier pro-inflammatory cytokines and chemokines, via SAPK/JNK and p38 MAPK pathways. Frontiers in Nutrition, 4. ISSN 2296-861X

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van Bussel, I. P. G., Backx, E. M. P., De Groot, C. P. G. M., Tieland, M., Muller, M. ORCID: https://orcid.org/0000-0002-5930-9905 and Afman, L. A. (2017) The impact of protein quantity during energy restriction on genome-wide gene expression analysis in adipose tissue of obese humans. International Journal of Obesity, 41 (7). 1114–1120. ISSN 0307-0565

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Wegmann, Udo, Carvalho, Ana Lucia, Stocks, Martin and Carding, Simon R. (2017) Use of genetically modified bacteria for drug delivery in humans: Revisiting the safety aspect. Scientific Reports, 7. ISSN 2045-2322

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Zundler, Sebastian, Fischer, Anika, Schillinger, Daniella, Binder, Marie-Theres, Atreya, Raja, Rath, Timo, Lopez-Posadas, Rocio, Voskens, Caroline, Watson, Alastair ORCID: https://orcid.org/0000-0003-3326-0426, Atreya, Imke, Neufert, Clemens and Neurath, Markus (2017) The α4β1 homing pathway is essential for ileal homing of Crohn's disease effector T cells in vivo. Inflammatory Bowel Diseases, 23 (3). pp. 379-391. ISSN 1078-0998

Zundler, Sebastian, Schillinger, Daniella, Fischer, Anika, Atreya, Raja, Lopez-Posadas, Rocio, Watson, Alastair ORCID: https://orcid.org/0000-0003-3326-0426, Neufert, Clemens, Atreya, Imke and Neurath, Markus F. (2017) Blockade of αEβ7 integrin suppresses accumulation of CD8+ and Th9 lymphocytes from patients with IBD in the inflamed gut in vivo. Gut, 66 (11). pp. 1936-1948. ISSN 0017-5749