Items where Author is "Maclean, Daniel"

Yan, Xia, Tang, Bozeng, Ryder, Lauren S., MacLean, Dan, Were, Vincent M., Eseola, Alice Bisola, Cruz-Mireles, Neftaly, Ma, Weibin, Foster, Andrew J., Osés-Ruiz, Miriam and Talbot, Nicholas J. ORCID: https://orcid.org/0000-0001-6434-7757 (2023) The transcriptional landscape of plant infection by the rice blast fungus Magnaporthe oryzae reveals distinct families of temporally co-regulated and structurally conserved effectors. Plant Cell, 35 (5). pp. 1360-1385. ISSN 1040-4651

Kristianingsih, Ruth and MacLean, Dan (2021) Accurate plant pathogen effector protein classification ab initio with deepredeff: An ensemble of convolutional neural networks. BMC Bioinformatics, 22. ISSN 1471-2105

Thor, Kathrin, Jiang, Shushu, Michard, Erwan, George, Jeoffrey, Scherzer, Sönke, Huang, Shouguang, Dindas, Julian, Derbyshire, Paul, Leitão, Nuno, Defalco, Thomas A., Köster, Philipp, Hunter, Kerri, Kimura, Sachie, Gronnier, Julien, Stransfeld, Lena, Kadota, Yasuhiro, Bücherl, Christoph A., Charpentier, Myriam, Wrzaczek, Michael, Maclean, Daniel, Oldroyd, Giles E. D., Menke, Frank L. H. ORCID: https://orcid.org/0000-0003-2490-4824, Roelfsema, M. Rob G., Hedrich, Rainer, Feijó, José and Zipfel, Cyril (2020) The calcium-permeable channel OSCA1.3 regulates plant stomatal immunity. Nature, 585 (7826). 569–573. ISSN 0028-0836

De la Concepcion, Juan Carlos, Franceschetti, Marina, MacLean, Dan, Terauchi, Ryohei, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Banfield, Mark J (2019) Protein engineering expands the effector recognition profile of a rice NLR immune receptor. eLife, 8. ISSN 2050-084X

Bourdais, Gildas, McLachlan, Deirdre H, Rickett, Lydia M, Zhou, Ji, Siwoszek, Agnieszka, Häweker, Heidrun, Hartley, Matthew, Kuhn, Hannah, Morris, Richard J, MacLean, Dan and Robatzek, Silke (2019) The use of quantitative imaging to investigate regulators of membrane trafficking in Arabidopsis stomatal closure. Traffic, 20 (2). pp. 168-180. ISSN 1398-9219

Rallapalli, Ghanasyam, Corredor-Moreno, Pilar, Chalstrey, Edward, Page, Martin and Maclean, Daniel (2019) Rapid fine mapping of causative mutations from sets of unordered, contig-sized fragments of genome sequence. BMC Bioinformatics, 20. ISSN 1471-2105

Tomlinson, Laurence, Yang, Ying, Emenecker, Ryan, Smoker, Matthew, Taylor, Jodie, Perkins, Sara, Smith, Justine, MacLean, Dan, Olszewski, Neil E. and Jones, Jonathan D. G. (2019) Using CRISPR/Cas9 genome editing in tomato to create a gibberellin-responsive dominant dwarf DELLA allele. Plant Biotechnology Journal, 17 (1). pp. 132-140. ISSN 1467-7644

McMullan, Mark, Rafiqi, Maryam, Kaithakottil, Gemy, Clavijo, Bernardo J., Bilham, Lorelei, Orton, Elizabeth, Percival-Alwyn, Lawrence, Ward, Ben J., Edwards, Anne, Saunders, Diane G.O., Garcia Accinelli, Gonzalo, Wright, Jonathan, Verweij, Walter, Koutsovoulos, Georgios, Yoshida, Kentaro, Hosoya, Tsuyoshi, Williamson, Louisa, Jennings, Philip, Ioos, Renaud, Husson, Claude, Hietala, Ari M., Vivian-Smith, Adam, Solheim, Halvor, MaCclean, Dan, Fosker, Christine, Hall, Neil ORCID: https://orcid.org/0000-0003-2808-0009, Brown, James K. M., Swarbreck, David, Blaxter, Mark, Downie, J. Allan and Clark, Matthew D. (2018) The ash dieback invasion of Europe was founded by two genetically divergent individuals. Nature Ecology and Evolution, 2 (6). pp. 1000-1008. ISSN 2397-334X

Bücherl, Christoph A, Jarsch, Iris Katharina, Schudoma, Christian, Segonzac, Cécile, Mbengue, Malick, Robatzek, Silke, MacLean, Daniel, Ott, Thomas and Zipfel, Cyril (2017) Plant immune and growth receptors share common signalling components but localise to distinct plasma membrane nanodomains. eLife, 6. ISSN 2050-084X

Kawashima, Cintia G., Augusto Guimaraes, Gustavo, Regina Nogueira, Sonia, Maclean, Dan, Cook, Doug R., Steuernagel, Burkhard, Baek, Jongmin, Bouyioukos, Costas, do V A Melo, Bernardo, Tristao, Gustavo, Camargos de Oliveira, Jamile, Rauscher, Gilda, Mittal, Shipra, Panichelli, Lisa, Bacot, Karen, Johnson, Ebony, Iyer, Geeta, Tabor, Girma, Wulff, Brande B. H., Ward, Eric, Rairdan, Gregory J., Broglie, Karen E., Wu, Gusui, Van Esse, H. Peter, Jones, Jonathan D. G. and Brommonschenkel, Sergio H. (2016) A pigeonpea gene confers resistance to Asian soybean rust in soybean. Nature Biotechnology, 34 (6). 661–665. ISSN 1087-0156

Younsi, Reda and Maclean, Dan (2015) Using 2k + 2 bubble searches to find single nucleotide polymorphisms in k-mer graphs. Bioinformatics, 31 (5). pp. 642-646. ISSN 1367-4803

Rallapalli, Ghanasyam, Kemen, Eric M, Robert-Seilaniantz, Alexandre, Segonzac, Cécile, Etherington, Graham J, Sohn, Kee Hoon, MacLean, Daniel and Jones, Jonathan D G (2014) EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics. BMC Genomics, 15. ISSN 1471-2164

MacLean, Dan, Yoshida, Kentaro, Edwards, Anne, Crossman, Lisa, Clavijo, Bernardo, Clark, Matt, Swarbreck, David, Bashton, Matthew, Chapman, Patrick, Gijzen, Mark, Caccamo, Mario, Downie, Allan, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and Saunders, Diane G. O. (2013) Crowdsourcing genomic analyses of ash and ash dieback - power to the people. GigaScience, 2 (1). ISSN 2047-217X

Leggett, Richard M., Ramirez-Gonzalez, Ricardo H., Verweij, Walter, Kawashima, Cintia G., Iqbal, Zamin, Jones, Jonathan D. G., Caccamo, Mario and MacLean, Daniel (2013) Identifying and classifying trait linked polymorphisms in non-reference species by walking coloured de Bruijn graphs. PLoS One, 8 (3). ISSN 1932-6203

Beck, Martina, Zhou, Ji, Faulkner, Christine, MacLean, Daniel and Robatzek, Silke (2012) Spatio-temporal cellular dynamics of the Arabidopsis flagellin receptor reveal activation status-dependent endosomal sorting. The Plant Cell, 24 (10). pp. 4205-4219. ISSN 1040-4651

van den Burg, Harrold A., Tsitsigiannis, Dimitrios I., Rowland, Owen, Lo, Jane, Rallapalli, Ghanasyam, Maclean, Daniel, Takken, Frank L. W. and Jones, Jonathan D. G. (2008) The F-Box protein ACRE189/ACIF1 regulates cell death and defense responses activated during pathogen recognition in tobacco and tomato. The Plant Cell, 20 (3). pp. 697-719. ISSN 1040-4651