Items where Research Group is "Computational Biology

Article

Asque, Christopher, Day, Andy and Laycock, Stephen (2014) Augmenting graphical user interfaces with haptic assistance for motion-impaired operators. International Journal of Human-Computer Studies, 72 (10-11). pp. 689-703. ISSN 1071-5819

Balvočiūtė, Monika, Spillner, Andreas and Moulton, Vincent (2014) FlatNJ: A novel network-based approach to visualize evolutionary and biogeographical relationships. Systematic Biology, 63 (3). pp. 383-396. ISSN 1076-836X

Bastkowski, Sarah, Spillner, Andreas and Moulton, Vincent (2014) Fishing for minimum evolution trees with Neighbor-Nets. Information Processing Letters, 114 (1-2). pp. 13-18. ISSN 0020-0190

Cawley, G.C. and Talbot, N.L.C. (2014) Kernel learning at the first level of inference. Neural Networks, 53. pp. 69-80. ISSN 0893-6080

Dress, Andreas, Huber, Katharina T. and Steel, Mike (2014) A matroid associated with a phylogenetic tree. Discrete Mathematics and Theoretical Computer Science, 16 (2). pp. 41-56. ISSN 1365-8050

Fisher, Mark, Applegate, Christopher, Ryalat, Mohammad, Laycock, Stephen, Hulse, Mark, Emmens, Daniel and Bell, Duncan (2014) Evaluation of 3D printed immobilisation shells for head and neck IMRT. Open Journal of Radiology, 04 (04). pp. 322-328. ISSN 2164-3024

Greco, Mark, Bell, Duncan, Woolnough, Lewis, Laycock, Stephen, Corps, Nick, Mortimore, David and Hudson, Diana (2014) 3-D visualisation, printing, and volume determination of the tracheal respiratory system in the adult desert locust, Schistocerca gregaria. Entomologia Experimentalis et Applicata, 152 (1). pp. 42-51. ISSN 0013-8703

Hayward, Steven, Leader, David P., Al-Shubailly, Fawzia and Milner-White, E. James (2014) Rings and ribbons in protein structures: Characterization using helical parameters and Ramachandran plots for repeating dipeptides. Proteins: Structure Function and Bioinformatics, 82 (2). pp. 230-239. ISSN 0887-3585

Herrmann, Sven and Moulton, Vincent (2014) Computing the blocks of a quasi-median graph. Discrete Applied Mathematics, 179. pp. 129-138. ISSN 0166-218X

Huber, K. T., Moulton, V., Semple, C. and Wu, T. (2014) Representing partitions on trees. SIAM Journal on Discrete Mathematics, 28 (3). pp. 1152-1172. ISSN 0895-4801

Huber, Katharina T. and Steel, Mike (2014) Reconstructing fully-resolved trees from triplet cover distances. Electronic Journal of Combinatorics, 21 (2). ISSN 1077-8926

Iakovou, Georgios, Hayward, Steven and Laycock, Stephen (2014) A real-time proximity querying algorithm for haptic-based molecular docking. Faraday Discussions, 169. pp. 359-377. ISSN 1359-6640

Lopez-Gomollon, Sara, Beckers, Matthew, Rathjen, Tina, Moxon, Simon, Maumus, Florian, Mohorianu, Irina, Moulton, Vincent, Dalmay, Tamas and Mock, Thomas (2014) Global discovery and characterization of small non-coding RNAs in marine microalgae. BMC Genomics, 15 (1). ISSN 1471-2164

Popescu, Andrei-Alin, Harper, Andrea, Trick, Martin, Bancroft, Ian and Huber, Katharina T. (2014) A novel and fast approach for population structure inference using kernel-PCA and optimization (PSIKO). Genetics, 198 (4). pp. 1421-31. ISSN 1943-2631

Rallapalli, Ghanasyam, Kemen, Eric M, Robert-Seilaniantz, Alexandre, Segonzac, Cécile, Etherington, Graham J, Sohn, Kee Hoon, MacLean, Daniel and Jones, Jonathan D G (2014) EXPRSS: an Illumina based high-throughput expression-profiling method to reveal transcriptional dynamics. BMC Genomics, 15. ISSN 1471-2164

Reynolds, D. T., Laycock, S. D. and Day, A. M. (2014) Real-time accumulation of occlusion-based snow. The Visual Computer, 31. pp. 689-700. ISSN 0178-2789

Roshan, A., Jones, P. H. and Greenman, C. D. (2014) Exact, time-independent estimation of clone size distributions in normal and mutated cells. Journal of The Royal Society Interface, 11 (99). ISSN 1742-5689

Taylor, D., Cawley, G. and Hayward, S. (2014) Quantitative method for the assignment of hinge and shear mechanism in protein domain movements. Bioinformatics, 30 (22). pp. 3189-3196. ISSN 1367-4803

Toseland, Andrew, Moxon, Simon, Mock, Thomas and Moulton, Vincent (2014) Metatranscriptomes from diverse microbial communities: assessment of data reduction techniques for rigorous annotation. BMC Genomics, 15. ISSN 1471-2164

Van Iersel, Leo and Moulton, Vincent (2014) Trinets encode tree-child and level-2 phylogenetic networks. Journal of Mathematical Biology, 68 (7). pp. 1707-1729. ISSN 0303-6812

Volkmann, Logan, Martyn, Iain, Moulton, Vincent, Spillner, Andreas and Mooers, Arne O. (2014) Prioritizing populations for conservation using phylogenetic networks. PLoS One, 9 (2). ISSN 1932-6203

Wade, Amy S. I., Barov, Boris, Burfield, Ian J., Gregory, Richard D., Norris, Ken, Vorisek, Petr, Wu, Taoyang and Butler, Simon (2014) A niche-based framework to assess current monitoring of European forest birds and guide indicator species' selection. PLoS One, 9 (5). ISSN 1932-6203

West, Claire, James, Stephen A, Davey, Robert P, Dicks, Jo and Roberts, Ian N (2014) Ribosomal DNA sequence heterogeneity reflects intraspecies phylogenies and predicts genome structure in two contrasting yeast species. Systematic Biology, 63 (4). pp. 543-554. ISSN 1063-5157

Zhu, Sha, Than, Cuong and Wu, Taoyang (2014) Clades and clans: a comparison study of two evolutionary models. Journal of Mathematical Biology, 71 (1). pp. 99-124. ISSN 0303-6812