Bailey, Andrew M., Constantinidou, Chrystala, Ivens, Al, Garvey, Mark I., Webber, Mark A., Coldham, Nick, Hobman, Jon L., Wain, John, Woodward, Martin J. and Piddock, Laura J. V. (2009) Exposure of Escherichia coli and Salmonella enterica serovar Typhimurium to triclosan induces a species-specific response, including drug detoxification. Journal of Antimicrobial Chemotherapy, 64 (5). pp. 973-985. ISSN 0305-7453
Cooke, Fiona J., Ginwalla, Sara, Hampton, Michael D., Wain, John, Ross-Russell, Robert, Lever, Andrew and Farrington, Mark (2009) Report of neonatal meningitis due to Salmonella enterica serotype Agona and review of breast milk-associated neonatal Salmonella infections. Journal of Clinical Microbiology, 47 (9). pp. 3045-3049. ISSN 0095-1137
Dorai-Raj, Siobhan, O'Grady, Justin and Colleran, Emer (2009) Specificity and sensitivity evaluation of novel and existing Bacteroidales and Bifidobacteria-specific PCR assays on feces and sewage samples and their application for microbial source tracking in Ireland. Water Research, 43 (19). pp. 4980-4988. ISSN 1879-2448
Holt, Kathryn E., Teo, Yik Y., Li, Heng, Nair, Satheesh, Dougan, Gordon, Wain, John and Parkhill, Julian (2009) Detecting SNPs and estimating allele frequencies in clonal bacterial populations by sequencing pooled DNA. Bioinformatics, 25 (16). pp. 2074-2075. ISSN 1367-4803
Holt, Kathryn E., Thomson, Nicholas R., Wain, John, Langridge, Gemma C., Hasan, Rumina, Bhutta, Zulfiqar A., Quail, Michael A., Norbertczak, Halina, Walker, Danielle, Simmonds, Mark, White, Brian, Bason, Nathalie, Mungall, Karen, Dougan, Gordon and Parkhill, Julian (2009) Pseudogene accumulation in the evolutionary histories of Salmonella enterica serovars Paratyphi A and Typhi. BMC Genomics, 10. ISSN 1471-2164
Langridge, Gemma C., Phan, Minh-Duy, Turner, Daniel J., Perkins, Timothy T., Parts, Leopold, Haase, Jana, Charles, Ian, Maskell, Duncan J., Peters, Sarah E., Dougan, Gordon, Wain, John, Parkhill, Julian and Turner, A. Keith (2009) Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants. Genome Research, 19 (12). pp. 2308-2316. ISSN 1088-9051
McGuinness, Sheila, McCabe, Evonne, O’Regan, Edel, Dolan, Anthony, Duffy, Geraldine, Burgess, Catherine, Fanning, Seamus, Barry, Thomas and O'Grady, Justin (2009) Development and validation of a rapid real-time PCR based method for the specific detection of Salmonella on fresh meat. Meat Science, 83 (3). pp. 555-562. ISSN 1873-4138
O'Grady, Justin, Ruttledge, Margaret, Sedano-Balbás, Sara, Smith, Terry J., Barry, Thomas and Maher, Majella (2009) Rapid detection of Listeria monocytogenes in food using culture enrichment combined with real-time PCR. Food Microbiology, 26 (1). pp. 4-7. ISSN 0740-0020
Phan, Minh-Duy, Kidgell, Claire, Nair, Satheesh, Holt, Kathryn E., Turner, Arthur K., Hinds, Jason, Butcher, Philip, Cooke, Fiona J., Thomson, Nicholas R., Titball, Richard, Bhutta, Zulfiqar A., Hasan, Rumina, Dougan, Gordon and Wain, John (2009) Variation in Salmonella enterica serovar Typhi IncHI1 plasmids during the global spread of resistant typhoid fever. Antimicrobial Agents and Chemotherapy, 53 (2). pp. 716-727. ISSN 0066-4804
Schelenz, S, Barnes, RA, Kibbler, CC, Jones, BL and Denning, DW (2009) Standards of care for patients with invasive fungal infections within the United Kingdom: a national audit. Journal of Infection, 58 (2). pp. 145-153. ISSN 1532-2742
Webber, Mark A., Bailey, Andrew M., Blair, Jessica M. A., Morgan, Eirwen, Stevens, Mark P., Hinton, Jay C. D., Ivens, Al, Wain, John and Piddock, Laura J. V. (2009) The global consequence of disruption of the AcrAB-TolC efflux pump in Salmonella enterica includes reduced expression of SPI-1 and other attributes required to infect the host. Journal of Bacteriology, 191 (13). pp. 4276-4285. ISSN 0021-9193
Garcia-Cordero, J.L., Dimov, I.K., O'Grady, Justin, Ducree, J., Barry, T. and Ricco, A.J. (2009) Monolithic centrifugal microfluidic platform for bacteria capture and concentration, lysis, nucleic-acid amplification, and real-time detection. In: IEEE 22nd International Conference on Micro Electro Mechanical Systems (MEMS)., 2009-01-01.