Items where Research Group is "Computational biology of RNA (former - to 2018)

Article

Bang, S., Koolen, J. and Moulton, V. (2007) Two theorems concerning the Bannai-Ito Conjecture. European Journal of Combinatorics, 28 (7). pp. 2026-2052. ISSN 0195-6698

Bryant, David, Moulton, Vincent and Spillner, Andreas (2007) Consistency of the Neighbor-Net algorithm. Algorithms for Molecular Biology, 2. ISSN 1748-7188

Brysting, Anne K., Oxelman, Bengt, Huber, Katharina T., Moulton, Vincent and Brochmann, Christian (2007) Untangling complex histories of genome mergings in high polyploids. Systematic Biology, 56 (3). pp. 467-476. ISSN 1063-5157

Dress, A., Huber, K. T. and Moulton, V. (2007) Some uses of the Farris Transform in mathematics and phylogenetics - A review. Annals of Combinatorics, 11 (1). pp. 1-37. ISSN 0218-0006

Freyhult, Eva, Moulton, Vincent and Clote, Peter (2007) Boltzmann probability of RNA structural neighbors and riboswitch detection. Bioinformatics, 23 (16). pp. 2054-2062. ISSN 1367-4803

Freyhult, Eva, Moulton, Vincent and Clote, Peter (2007) RNAbor: a web server for RNA structural neighbors. Nucleic Acids Research, 35 (suppl 2). W305-W309. ISSN 0305-1048

Grünewald, Stefan, Forslund, Kristoffer, Dress, Andreas and Moulton, Vincent (2007) QNet: An agglomerative method for the construction of phylogenetic networks from weighted quarters. Molecular Biology and Evolution, 24 (2). pp. 532-538. ISSN 0737-4038

Holland, B., Conner, Glenn, Huber, Katharina T. and Moulton, V. (2007) Imputing supertrees and supernetworks from quartets. Systematic Biology, 56 (1). pp. 57-67. ISSN 1063-5157

Koolen, Jack, Lesser, Alice and Moulton, Vincent (2007) Concerning the relationship between realizations and tight spans of finite metrics. Discrete and Computational Geometry, 38 (3). pp. 605-614. ISSN 0179-5376

Kutalik, Z., Tucker, W. and Moulton, V. (2007) S-system parameter estimation for noisy metabolic profiles using Newton-flow analysis. IET Systems Biology, 1 (3). pp. 174-180. ISSN 1751-8849

Moulton, Vincent, Semple, Charles and Steel, Mike (2007) Optimizing phylogenetic diversity under constraints. Journal of Theoretical Biology, 246 (1). pp. 186-194. ISSN 0022-5193

Rusholme Pilcher, Rachel, Moxon, Simon, Pakseresht, Nima, Moulton, Vincent, Manning, Kenneth, Seymour, Graham and Dalmay, Tamas (2007) Identification of novel short RNAs in tomato (Solanum lycopersicum). Planta, 226 (3). pp. 709-717. ISSN 0032-0935

Tucker, Warwick, Kutalik, Zoltán and Moulton, Vincent (2007) Estimating parameters for generalized mass action models using constraint propagation. Mathematical Biosciences, 208 (2). pp. 607-620. ISSN 0025-5564

Book Section

Dress, Andreas W. M., Huber, Katharina T., Koolen, Jack H. and Moulton, Vincent (2007) An algorithm for computing virtual cut points in finite metric spaces. In: Combinatorial Optimization and Applications. Lecture Notes in Computer Sciences . Springer. ISBN 978-3-540-73555-7

Dress, Andreas W. M., Huber, Katharina T., Koolen, Jacobus and Moulton, Vincent (2007) An algorithm for computing virtual cut points in finite metric spaces. In: Combinatorial Optimization and Applications. Lecture Notes in Computing Science, 4616 . Springer Berlin / Heidelberg, pp. 4-10.