Association of gut microbiota and gut metabolites and adverse outcomes in biliary atresia: A longitudinal prospective study

Jain, Vandana, Dalby, Matthew J., Alexander, Emma C., Burford, Charlotte, Acford-Palmer, Holly, Serghiou, Iliana R., Teng, Nancy M. Y., Kiu, Raymond, Gerasimidis, Konstantinos, Zafeiropoulou, Konstantina, Logan, Michael, Verma, Anita, Davenport, Mark, Hall, Lindsay J. ORCID: https://orcid.org/0000-0001-8938-5709 and Dhawan, Anil (2024) Association of gut microbiota and gut metabolites and adverse outcomes in biliary atresia: A longitudinal prospective study. Hepatology Communications, 8 (11). ISSN 2471-254X

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Abstract

Background: The Kasai portoenterostomy (KPE) aims to re-establish bile flow in biliary atresia (BA); however, BA remains the commonest indication for liver transplantation in pediatrics. Gut microbiota-host interplay is increasingly associated with outcomes in chronic liver disease. This study characterized fecal microbiota and fatty acid metabolites in BA. Methods: Fecal samples were prospectively collected in newly diagnosed BA infants (n = 55) before and after KPE. Age-matched healthy control (n = 19) and cholestatic control (n = 21) fecal samples were collected. Fecal 16S rRNA gene amplicon sequencing for gut microbiota and gas chromatography for fecal fatty acids was performed. Results: Increased abundance of Enterococcus in pre-KPE BA and cholestatic control infants, compared to healthy infants, was demonstrated. At the early post-KPE time points, increased alpha diversity was revealed in BA versus healthy cohorts. A lower relative abundance of Bifidobacterium and increased Enterococcus, Clostridium, Fusobacterium, and Pseudomonas was seen in infants with BA. Fecal acetate was reduced, and fecal butyrate and propionate were elevated in early post-KPE BA infants. Higher post-KPE alpha diversity was associated with nonfavorable clinical outcomes (6-month jaundice and liver transplantation). A higher relative abundance of post-KPE Streptococcus and Fusobacterium and a lower relative abundance of Dorea, Blautia, and Oscillospira were associated with nonfavorable clinical outcomes. Blautia inversely correlated to liver disease severity, and Bifidobacterium inversely correlated to fibrosis biomarkers. Bifidobacterium abundance was significantly lower in infants experiencing cholangitis within 6 months after KPE. Conclusions: Increased diversity, enrichment of pathogenic, and depletion of beneficial microbiota early post-KPE are all factors associated with nonfavorable BA outcomes. Manipulation of gut microbiota in the early postsurgical period could provide therapeutic potential.

Item Type: Article
Additional Information: Data availability statement: Data, analytical methods, and study materials are available to other researchers under specific requests. The data collected for the study, including anonymous individual participant data and the data dictionary defining each field in the set, will be made available to others for scientific purposes. The data and related documents, including analytical methods and study materials, will be available after the publication date on specific request to vjain@nhs.net, with a signed data access agreement and restriction of publication without the authors’ consent. Funding information: Joint BSPGHAN/CLDF charity fund.
Uncontrolled Keywords: biliary atresia,liver transplantation,microbiota,short-chain fatty acid,hepatology ,/dk/atira/pure/subjectarea/asjc/2700/2721
Faculty \ School: Faculty of Medicine and Health Sciences > Norwich Medical School
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Depositing User: LivePure Connector
Date Deposited: 07 Dec 2024 01:41
Last Modified: 19 Dec 2024 01:14
URI: https://ueaeprints.uea.ac.uk/id/eprint/97940
DOI: 10.1097/HC9.0000000000000550

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