DEER and RIDME measurements of the nitroxide-spin labelled copper-bound amine oxidase homodimer from Arthrobacter Globiformis

Russell, Hannah, Stewart, Rachel, Prior, Christopher, Oganesyan, Vasily S. ORCID: https://orcid.org/0000-0002-8738-1146, Gaule, Thembaninkosi G. and Lovett, Janet E. (2021) DEER and RIDME measurements of the nitroxide-spin labelled copper-bound amine oxidase homodimer from Arthrobacter Globiformis. Applied Magnetic Resonance, 52 (8). 995–1015. ISSN 0937-9347

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Abstract

In the study of biological structures, pulse dipolar spectroscopy (PDS) is used to elucidate spin–spin distances at nanometre-scale by measuring dipole–dipole interactions between paramagnetic centres. The PDS methods of Double Electron Electron Resonance (DEER) and Relaxation Induced Dipolar Modulation Enhancement (RIDME) are employed, and their results compared, for the measurement of the dipolar coupling between nitroxide spin labels and copper-II (Cu(II)) paramagnetic centres within the copper amine oxidase from Arthrobacter globiformis (AGAO). The distance distribution results obtained indicate that two distinct distances can be measured, with the longer of these at c.a. 5 nm. Conditions for optimising the RIDME experiment such that it may outperform DEER for these long distances are discussed. Modelling methods are used to show that the distances obtained after data analysis are consistent with the structure of AGAO.

Item Type: Article
Uncontrolled Keywords: atomic and molecular physics, and optics ,/dk/atira/pure/subjectarea/asjc/3100/3107
Faculty \ School: Faculty of Science > School of Chemistry (former - to 2024)
UEA Research Groups: Faculty of Science > Research Groups > Chemistry of Light and Energy
Faculty of Science > Research Groups > Chemistry of Life Processes
Faculty of Science > Research Centres > Centre for Molecular and Structural Biochemistry
Faculty of Science > Research Groups > Centre for Photonics and Quantum Science
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Depositing User: LivePure Connector
Date Deposited: 09 Apr 2021 23:50
Last Modified: 25 Oct 2024 23:54
URI: https://ueaeprints.uea.ac.uk/id/eprint/79665
DOI: 10.1007/s00723-021-01321-6

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