Items where Research Group is "Computational Biology

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Boulton, William, Salamov, Asaf, Grigoriev, Igor V., Calhoun, Sara, LaButti, Kurt, Riley, Robert, Barry, Kerrie, Fong, Allison A., Hoppe, Clara J. M., Metfies, Katja, Oetjen, Kersten, Eggers, Sarah Lena, Müller, Oliver, Gardner, Jessie, Granskog, Mats A., Torstensson, Anders, Oggier, Marc, Larsen, Aud, Bratbak, Gunnar, Toseland, Andrew, Leggett, Richard M., Moulton, Vincent and Mock, Thomas (2025) Metagenome-assembled-genomes recovered from the Arctic drift expedition MOSAiC. Scientific Data, 12. ISSN 2052-4463

Bryant, David, Huber, Katharina, Moulton, Vincent and Spillner, Andreas (2025) Subtree distances, tight spans and diversities. Topology and its Applications. ISSN 0166-8641 (In Press)

Bryant, David, Huber, Katharina T., Moulton, Vincent and Spillner, Andreas (2025) Buneman graphs, partial splits and subtree distances. Discrete Applied Mathematics, 369. pp. 28-44. ISSN 0166-218X

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Edwards, Jacob, Laycock, Stephen, Roebuck, Thomas, Ma, YingLiang and Wang, Cheng (2025) From Overview to Immersion: Level-of-Detail Digitization of High Ceilings in Virtual Reality. In: Digital Heritage 2025 - 4th International Congress, 2025-09-08 - 2025-09-13. (In Press)

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Holtgrefe, Niels, Huber, Katharina, van Iersel, Leo, Jones, Mark, Martin, Samuel and Moulton, Vincent (2025) SQUIRREL: Reconstructing semi-directed phylogenetic level-1 networks from four-leaved networks or sequence alignments. Molecular Biology and Evolution, 42 (4). ISSN 0737-4038

Huber, Katharina, Linz, Simone and Moulton, Vincent (2025) Cherry picking in forests: A new characterization for the unrooted hybrid number of two phylogenetic trees. Discrete Mathematics and Theoretical Computer Science, 272 (2). ISSN 1462-7264

Huber, Katharina, van Iersel, Leo, Jones, Mark, Moulton, Vincent and Veenema-Nipius, Leonie (2025) When are quarnets sufficient to reconstruct semi-directed phylogenetic networks? Bulletin of Mathematical Biology. ISSN 0092-8240 (In Press)

Huber, Katharina T. and Overman, Darren (2025) Arboreal networks and their underlying trees.

Huber, Katharina T., van Iersel, Leo, Moulton, Vincent and Scholz, Guillaume E. (2025) Is this network proper forest-based? Information Processing Letters, 187. ISSN 0020-0190

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Iakovou, Georgios, Palmer, Leoni, Ganesan, A., Kitao, Akio, Laycock, Stephen D. and Hayward, Steven (2025) Interactive docking workshop: Docking the anticancer drug Belinostat to its cellular histone deacetylase (HDAC) target. Journal of Chemical Education, 102 (6). 2514–2521. ISSN 0021-9584

Iakovou, Georgios, Palmer, Leoni, Ganesan, A., Kitao, Akio, Laycock, Stephen D. and Hayward, Steven (2025) Protein domain movement involved in binding of belinostat and HPOB as inhibitors of histone deacetylase 6 (HDAC6): a hybrid automated-interactive docking study. Journal of Computer-Aided Molecular Design, 39. ISSN 0920-654X

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Jones, Adam, Ponte, Santiago, Iglesias, Isaac, Tonge, Nicola, Williamson, David, Martos, Vera, Orth, Till, Schoenberger, Torsten, Cobas, Carlos, Huber, Katharina and Kemsley, E. Kate (2025) Message Passing Neural Networks for Predicting 1H and 19F Chemical Shifts. In: Experimental Nuclear Magnetic Resonance Conference 2025, 2025-04-06 - 2025-04-10, Asilomar Conference Center, Pacific Grove, California.

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Lafond, Manuel and Moulton, Vincent (2025) Path partitions of phylogenetic networks. Theoretical Computer Science, 1024. ISSN 0304-3975

Liu, Hexuan, Lu, Bing-Ze, Wu, Taoyang and Yu, Guan-Ru (2025) Asymptotic Enumeration of Subclasses of Level-2 Phylogenetic Networks. In: EUROCOMB'25. UNSPECIFIED.

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Moulton, Vincent and Spillner, Andreas (2025) Spaces of ranked tree-child networks. Journal of Mathematical Biology. ISSN 0303-6812 (In Press)

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Winder, Johanna C., Poulton, Simon, Wu, Taoyang, Mock, Thomas and van Oosterhout, Cock (2025) Environmental adaptations in metagenomes revealed by deep learning. BMC Biology, 23. ISSN 1741-7007