Items where Research Group is "Computational Biology

Article

Bescoby, David J., Cawley, Gavin C. ORCID: https://orcid.org/0000-0002-4118-9095 and Chroston, P. Neil (2006) Enhanced interpretation of magnetic survey data from archaeological sites using artificial neural networks. Geophysics, 71 (5). pp. 45-53. ISSN 1942-2156

Bignell, Graham, Smith, Raffaella, Hunter, Chris, Stephens, Philip, Davies, Helen, Greenman, Christopher, Teague, Jon, Butler, Adam, Edkins, Sarah, Stevens, Claire, O'Meara, Sarah, Parker, Adrian, Avis, Tim, Barthorpe, Syd, Brackenbury, Lisa, Buck, Gemma, Clements, Jody, Cole, Jennifer, Dicks, Ed, Edwards, Ken, Forbes, Simon, Gorton, Matthew, Gray, Kristian, Halliday, Kelly, Harrison, Rachel, Hills, Katy, Hinton, Jonathon, Jones, David, Kosmidou, Vivienne, Laman, Ross, Lugg, Richard, Menzies, Andrew, Perry, Janet, Petty, Robert, Raine, Keiran, Shepherd, Rebecca, Small, Alexandra, Solomon, Helen, Stephens, Yvonne, Tofts, Calli, Varian, Jennifer, Webb, Anthony, West, Sofie, Widaa, Sara, Yates, Andy, Gillis, Ad J. M., Stoop, Hans J., Van Gurp, Ruud J. H. L. M., Oosterhuis, J. Wolter, Looijenga, Leendert H. J., Futreal, P. Andrew, Wooster, Richard and Stratton, Michael R. (2006) Sequence analysis of the protein kinase gene family in human testicular germ-cell tumors of adolescents and adults. Genes, Chromosomes & Cancer, 45 (1). pp. 42-46. ISSN 1045-2257

Cawley, G. C. ORCID: https://orcid.org/0000-0002-4118-9095, Talbot, N. L. C., Janacek, G. J. and Peck, M. W. (2006) Sparse Bayesian kernel survival analysis for modeling the growth domain of microbial pathogens. IEEE Transactions on Neural Networks, 17 (2). pp. 471-481. ISSN 1045-9227

Cawley, Gavin C. ORCID: https://orcid.org/0000-0002-4118-9095 and Talbot, Nicola L. C. (2006) Gene selection in cancer classification using sparse logistic regression with Bayesian regularisation. Bioinformatics, 22 (19). pp. 2348-2355. ISSN 1367-4803

Davies, Helen, Dicks, Ed, Stephens, Philip, Cox, Charles, Teague, Jon, Greenman, Christopher, Bignell, Graham, O'meara, Sarah, Edkins, Sarah, Parker, Adrian, Stevens, Claire, Menzies, Andrew, Blow, Matt, Bottomley, Bill, Dronsfield, Mark, Futreal, P. Andrew, Stratton, Michael R. and Wooster, Richard (2006) High throughput DNA sequence variant detection by conformation sensitive capillary electrophoresis and automated peak comparison. Genomics, 87 (3). pp. 427-432. ISSN 0888-7543

Dress, Andreas, Huber, Katharina T., Lesser, Alice and Moulton, Vincent ORCID: https://orcid.org/0000-0001-9371-6435 (2006) Hereditarily optimal realizations of consistent metrics. Annals of Combinatorics, 10 (1). pp. 63-67. ISSN 0218-0006

Edkins, S., O’Meara, S. and Greenman, Christopher (2006) Recurrent KRAS codon 146 mutations in human colorectal cancer. Cancer Biology and Therapy, 5 (8). pp. 928-932. ISSN 1538-4047

Freyhult, Eva, Moulton, Vincent ORCID: https://orcid.org/0000-0001-9371-6435 and Ardell, David H. (2006) Visualizing bacterial tRNA identity determinants and antideterminants using function logos and inverse function logos. Nucleic Acids Research, 34 (3). pp. 905-916. ISSN 0305-1048

Greenman, Chris, Wooster, Richard, Futreal, P. Andrew, Stratton, Michael R. and Easton, Douglas F. (2006) Statistical analysis of pathogenicity of somatic mutations in cancer. Genetics, 173 (4). pp. 2187-2198. ISSN 0016-6731

Grünewald, S. and Huber, K. T. (2006) A novel insight into the perfect phylogeny problem. Annals of Combinatorics, 10 (1). pp. 97-109. ISSN 0218-0006

Haylock, Malcolm R., Cawley, Gavin C. ORCID: https://orcid.org/0000-0002-4118-9095, Harpham, Colin, Wilby, Rob L. and Goodess, Clare M. ORCID: https://orcid.org/0000-0002-7462-4479 (2006) Downscaling heavy precipitation over the United Kingdom: A comparison of dynamical and statistical methods and their future scenarios. International Journal of Climatology, 26 (10). pp. 1397-1415. ISSN 1097-0088

Hayward, Steven ORCID: https://orcid.org/0000-0001-6959-2604 and Kitao, Akio (2006) Molecular dynamics simulations of NAD(+)-induced domain closure in horse liver alcohol dehydrogenase. Biophysical Journal, 91 (5). pp. 1823-1831.

Holland, Barbara R., Jermiin, Lars S. and Moulton, Vincent ORCID: https://orcid.org/0000-0001-9371-6435 (2006) Improved consensus network techniques for genome-scale phylogeny. Molecular Biology and Evolution, 23 (5). pp. 848-855. ISSN 0737-4038

Huber, K. T. and Moulton, V. ORCID: https://orcid.org/0000-0001-9371-6435 (2006) Phylogenetic networks from multi-labelled trees. Journal of Mathematical Biology, 52 (5). pp. 613-632. ISSN 0303-6812

Huber, K.T., Koolen, J. and Moulton, V. ORCID: https://orcid.org/0000-0001-9371-6435 (2006) On the structure of the tight-span of a totally split-decomposable metric. European Journal of Combinatorics, 27 (3). pp. 461-479. ISSN 0195-6698

Huber, Katharina T., Oxelman, Bengt, Lott, Martin and Moulton, Vincent ORCID: https://orcid.org/0000-0001-9371-6435 (2006) Reconstructing the evolutionary history of polyploids from multilabeled trees. Molecular Biology and Evolution, 23 (9). pp. 1784-1791. ISSN 0737-4038

Li, Yunhai, Lee, Kee Khoon, Walsh, Sean, Smith, Caroline, Hadingham, Sophie, Sorefan, Karim, Cawley, Gavin C. ORCID: https://orcid.org/0000-0002-4118-9095 and Bevan, Michael W. (2006) Establishing glucose- and ABA-regulated transcription networks in Arabidopsis by microarray analysis and promoter classification using a Relevance Vector Machine. Genome Research, 16 (3). pp. 414-427. ISSN 1088-9051

Milner-White, James E., Watson, James D., Qi, Guoying and Hayward, Steven ORCID: https://orcid.org/0000-0001-6959-2604 (2006) Amyloid formation may involve α- to β sheet interconversion via peptide plane flipping. Structure, 14 (9). pp. 1369-1376. ISSN 0969-2126

Schlink, Uwe, Herbarth, Olf, Richter, Matthias, Dorling, Stephen, Nunnari, Giuseppe, Cawley, Gavin ORCID: https://orcid.org/0000-0002-4118-9095 and Pelikan, Emil (2006) Statistical models to assess the health effects and to forecast ground-level ozone. Environmental Modelling and Software, 21 (4). pp. 547-558. ISSN 1873-6726

Conference or Workshop Item

Cawley, G. C. ORCID: https://orcid.org/0000-0002-4118-9095 (2006) Leave-One-Out Cross-Validation Based Model Selection Criteria for Weighted LS-SVMs. In: 2006 International Joint Conference on Neural Networks, 2007-07-16 - 2007-07-21.

Polani, D., Nehaniv, C. L., Martnitz, T. and Kim, J. T. (2006) Relevant Information in Optimized Persistence vs. Progeny Strategies. In: 10th International Conference on the Simulation and Synthesis of Living Systems, 2006-01-01.