Items where School is "University of East Anglia > Faculty of Science > Research Groups > Molecular Microbiology
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- University of East Anglia (47978)
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Aljabali, Alaa A. A., Barclay, J. Elaine, Butt, Julea, Lomonossoff, George P. and Evans, David J. (2010) Redox-active ferrocene-modified Cowpea mosaic virus nanoparticles. Dalton Transactions, 39 (32). p. 7569.
Anderson, Lee J., Richardson, David and Butt, Julea (2001) Catalytic Protein Film Voltammetry from a Respiratory Nitrate Reductase Provides Evidence for Complex Electrochemical Modulation of Enzyme Activity†. Biochemistry, 40 (38). pp. 11294-11307.
Angove, H. C., Cole, Jeffrey A, Richardson, David and Butt, Julea (2002) Protein Film Voltammetry Reveals Distinctive Fingerprints of Nitrite and Hydroxylamine Reduction by a Cytochrome c Nitrite Reductase. The Journal of Biological Chemistry, 277 (26). pp. 23374-23381. ISSN 1083-351X
Appia‑Ayme, C, Hall, A, Patrick, E, Rajadurai, S, Clarke, TA and Rowley, G (2012) ZraP is a periplasmic molecular chaperone and a repressor of the zinc-responsive two-component regulator ZraSR. Biochemical Journal, 442 (1). pp. 85-93. ISSN 0264-6021
Arkenberg, A, Runkel, S, Richardson, DJ and Rowley, G (2011) The production and detoxification of a potent cytotoxin, nitric oxide, by pathogenic enteric bacteria. Biochemical Society Transactions, 39 (6). pp. 1876-1879. ISSN 0300-5127
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Balbontin, R., Rowley, G., Pucciarelli, M.G., Lopez-Garrido, J., Wormstone, Y., Lucchini, S., Garcia-Del Portillo, F., Hinton, J.C. and Casadesus, J. (2006) DNA adenine methylation regulates virulence gene expression in Salmonella enterica serovar Typhimurium. Journal of Bacteriology, 188 (23). pp. 8160-8168. ISSN 0021-9193
Bamford, V.A., Kolade, O.O., Osbourn, A.E. and Hemmings, A.M. (2004) Purification, crystallization and preliminary X-ray diffraction analysis of a fungal saponin-detoxifying enzyme. Acta Crystallographica D, 60. pp. 1331-1333.
Bamford, Vicki A., Angove, Hayley C., Seward, Harriet E., Thomson, Andrew J., Cole, Jeffrey A., Butt, Julea, Hemmings, Andrew and Richardson, David (2002) Structure and Spectroscopy of the Periplasmic Cytochrome c Nitrite Reductase from Escherichia coli. Biochemistry, 41 (9). pp. 2921-2931.
Beckwith, Chris, Edwards, Marcus, Lawes, Matthew, Shi, Liang, Butt, Julea, Richardson, David and Clarke, Tom (2015) Characterisation of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth. Frontiers in Microbiology, 6. ISSN 1664-302X
Bellini, P. and Hemmings, A.M. (2006) In vitro characterization of a bacterial manganese uptake regulator of the fur superfamily. Biochemistry, 45 (8). pp. 2686-2698. ISSN 0006-2698
Bonete, MJ, Martinez-Espinosa, RM, Pire, C, Zafrilla, B and Richardson, DJ (2008) Nitrogen metabolism in haloarchaea. Saline Systems, 4. p. 9. ISSN 1746-1448
Boutemy, LS, King, SRF, Win, Joe, Hughes, RK, Clarke, TA, Blumenschein, TMA, Kamoun, S and Banfield, MJ (2011) Structures of Phytophthora RXLR Effector Proteins: a CONSERVED BUT ADAPTABLE FOLD UNDERPINS FUNCTIONAL DIVERSITY. Journal of Biological Chemistry, 286 (41). pp. 35834-35842. ISSN 0021-9258
Bowater, R, Wood, I and Luisi, B (2012) From Beads on a String to the Pearls of Regulation: the Structure and Dynamics of Chromatin. Biochemical Society Transactions, 40 (2). pp. 331-334. ISSN 0300-5127
Bowater, Richard, Cobb, Andrew, Pivonkova, Hana, Havran, Ludek and Fojta, Miroslav (2015) Biophysical and electrochemical studies of protein-nucleic acid interactions. Monatshefte für Chemie - Chemical Monthly, 146 (5). pp. 723-739. ISSN 0026-9247
Bowden, S.D., Rowley, G., Hinton, J.C. and Thompson, A. (2009) Glucose and glycolysis are required for the successful infection of macrophages and mice by Salmonella enterica serovar typhimurium. Infection and Immunity, 77 (7). pp. 3117-3126. ISSN 0019-9567
Bradley, JM, Silkstone, G, Wilson, MT, Cheesman, MR and Butt, JN (2011) Probing a Complex of Cytochromecand Cardiolipin by Magnetic Circular Dichroism Spectroscopy: Implications for the Initial Events in Apoptosis. Journal of the American Chemical Society, 133 (49). pp. 19676-19679. ISSN 0002-7863
Bradley, Jenna, Butt, Julea and Cheesman, Myles (2011) Electrochemical titrations and reaction time courses monitored in situ by magnetic circular dichroism spectroscopy. Analytical Biochemistry, 419 (2). pp. 110-116. ISSN 1096-0309
Bradley, Justin M., Svistunenko, Dimitri A., Lawson, Tamara L., Hemmings, Andrew M., Moore, Geoffrey R. and Le Brun, Nick E. (2015) Three aromatic residues are required for electron transfer during iron mineralization in Bacterioferritin. Angewandte Chemie International Edition, 127 (49). 14976–14980. ISSN 1433-7851
Brightwell, G., Hussain, H., Tiburtius, A., Yeoman, K.H. and Johnston, Andy (1995) Pleiotropic effects of regulatory ros mutants of Agrobacterium radiobacter and their interaction with Fe and glucose. Molecular Plant-Microbe Interactions, 8 (5). pp. 747-754. ISSN 0894-0282
Brondijk, T.H.C., Fiegen, D., Richardson, D.J. and Cole, J.A. (2002) Roles of NapF, NapG and NapH, subunits of the Escherichia coli periplasmic nitrate reductase, in ubiquinol oxidation. Molecular Microbiology, 44. pp. 245-255. ISSN 1365-2958
Brondijk, T.H.C., Nilavongse, A., Filenko, N., Richardson, D.J. and Cole, J.A. (2004) NapGH components of the periplasmic nitrate reductase of Escherichia coli K-12: location, topology and physiological roles in quinol oxidation and redox balancing. Biochemical Journal, 379. pp. 47-55.
Brummett, Adam E, Schnicker, Nicholas J, Crider, Alexander, Todd, Jonathan and Dey, Mishtu (2015) Biochemical, kinetic, and spectroscopic characterization of Ruegeria pomeroyi DddW - A mononuclear iron-dependent DMSP lyase. PLoS ONE, 10 (5). ISSN 1932-6203
Bueno, E., Richardson, D.J. and Bedmar, E.J. (2009) Expression of Bradyrhizobium japonicum cbb(3) terminal oxidase under denitrifying conditions is subjected to redox conrol. FEMS Microbiology Letters, 298 (1). pp. 20-28. ISSN 1574-6968
Bullard, DR and Bowater, RP (2006) Direct comparison of nick-joining activity of the nucleic acid ligases from bacteriophage T4. Biochemical Journal, 398 (1). pp. 135-144. ISSN 0264-6021
Burlat, B, Gwyer, JD, Poock, S, Clarke, TA, Cole, JA, Hemmings, AM, Cheesman, MR, Butt, JN and Richardson, DJ (2005) Cytochrome c nitrite reductase: from structural to physicochemical analysis. Biochemical Society Transactions, 33 (1). pp. 137-140. ISSN 1470-8752
Butler, C.S. and Richardson, D.J. (2005) The emerging molecular structure of the nitrogen cycle: an introduction to the proceedings of the 10th annual N-cycle meeting. Biochemical Society Transactions, 33. pp. 113-118. ISSN 1470-8752
Butler, Clive S, Cheesman, Myles, Greenwood, Colin, Thomson, Andrew J and Watmough, Nick J (1997) Fast Cytochrome bo from Escherichia coli reacts with azide and nitric oxide to form a complex analogous to that formed by cytochrome c oxidase. Biochemical Society Transactions. 392S. ISSN 0300-5127
Butt, Julea (2014) Explorations of time and electrochemical potential: opportunities for fresh perspectives on signalling proteins. Biochemical Society Transactions, 42. pp. 47-51. ISSN 0300-5127
Butt, Julea, Gates, Andrew, Marritt, Sophie and Richardson, David (2015) Enzyme Film Electrochemistry. In: Electrochemical Processes in Biological Systems. Wiley-Blackwell, New Jersey, pp. 105-120. ISBN 978-0-470-57845-2
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Caly, DL, Coulthurst, S.J., Geoghegan, JA, Malone, J and Ryan, RP (2012) Socializing, networking and development: a report from the second ‘Young Microbiologists Symposium on Microbe Signalling, Organization and Pathogenesis’. Molecular Microbiology, 86 (3). pp. 501-512. ISSN 1365-2958
Carrión, Ornella, Pratscher, Jennifer, Curson, Andrew R.J., Williams, Beth T., Rostant, Wayne G., Murrell, J. Colin and Todd, Jonathan D. (2017) Methanethiol-dependent dimethylsulfide production in soil environments. The ISME Journal, 11 (10). 2379–2390. ISSN 1751-7362
Carter, R.A., Worsley, P.S., Sawers, G., Challis, G.L., Dilworth, M.J., Carson, K.C., Lawrence, J.A., Wexler, M., Johnston, A.W.B. and Yeoman, K.H. (2002) The vbs genes that direct synthesis of the siderophore vicibactin in Rhizobium leguminosarum: their expression in other genera requires ECF s factor Rpol. Molecular Microbiology, 44 (5). pp. 1153-1166. ISSN 0950-382X
Cheesman, Myles, Oganesyan, Vasily, Watmough, Nick, Butler, C.S. and Thomson, Andrew J. (2004) The Nature of the Exchange Coupling between High-Spin Fe(III) Heme o3 and CuB(II) in Escherichia coli Quinol Oxidase, Cytochrome bo3: MCD and EPR Studies. Journal of the American Chemical Society, 126 (13). pp. 4157-4166. ISSN 0002-7863
Cheesman, Myles, Watmough, Nick J, Pires, Charlotte A, Turner, Richard, Brittain (Auckland), T, Gennis (University of Illinois), Robert B, Greenwood, Colin and Thomson, Andrew (1993) Cytochrome bo from Escherichia coli: identification of haem ligands and reaction of the reduced enzyme with carbon monoxide. Biochemical Journal, 289. pp. 709-718. ISSN 0264-6021
Cheesman, Myles R., Watmough, Nicholas J., Gennis, Robert B., Greenwood, Colin and Thomson, Andrew J. (1994) Magnetic-circular-dichroism studies of Escherichia coli cytochrome bo. Identification of high-spin ferric, low-spin ferric and ferryl [Fe(IV)] forms of heme o. European Journal of Biochemistry, 219 (1-2). pp. 595-602. ISSN 0014-2956
Clark, L.C., Seipke, R.F., Prieto, P., Willemse, J., van Wezel, G.P., Hutchings, M.I. and Hoskisson, P.A. (2013) Mammalian cell entry genes in Streptomyces may provide clues to the evolution of bacterial virulence. Scientific Reports, 3. ISSN 2045-2322
Clarke, TA, Cole, JA, Richardson, DJ and Hemmings, AM (2007) The crystal structure of the pentahaem c-type cytochrome NrfB and characterization of its solution-state interaction with the pentahaem nitrite reductase NrfA. Biochemical Journal, 406 (1). pp. 19-30.
Clarke, TA, Dennison, V, Seward, HE, Burlat, B, Cole, JA, Hemmings, AM and Richardson, DJ (2004) Purification and spectropotentiometric characterization of Escherichia coli NrfB, a decaheme homodimer that transfers electrons to the decaheme periplasmic nitrite reductase complex. Journal of Biological Chemistry, 279 (40). pp. 41333-41339. ISSN 0021-9258
Clarke, TA, Kemp, GL, Van Wonderen, JH, Doyle, RM, Cole, JA, Tovell, N, Cheesman, MR, Butt, JN, Richardson, DJ and Hemmings, AM (2008) Role of a conserved gluatmine residue in tuning the catalytic activity of Escherichia coli cytochrome c nitrite reductase. Biochemistry, 47 (12). pp. 3789-3799.
Clarke, TA and Waskell, LA (2003) The metabolism of clopidogrel is catalyzed by human cytochrome P450 3A and is inhibited by atorvastatin. Drug Metabolism & Disposition, 31 (1). pp. 53-59. ISSN 1521-009X
Cornea, Christine, Bowater, Laura, James, Helen and Bowater, Richard (2012) Using science fiction to teach science facts. The Biochemist, 34 (6). pp. 15-20. ISSN 0954-982X
Crack, J, Smith, LJ, Stapleton, MR, Peck, J, Watmough, N, Buttner, MJ, Buxton, RS, Green, J, Oganesyan, V, Thomson, AJ and Le Brun, NE (2011) Mechanistic Insight into the Nitrosylation of the [4Fe−4S] Cluster of WhiB-like Proteins. Journal of the American Chemical Society, 133 (4). pp. 1112-1121. ISSN 0002-7863
Crack, JC, Green, J, Hutchings, M, Thomson, AJ and Le Brun, NE (2012) Bacterial iron-sulfur regulatory proteins as biological sensor-switches. Antioxidants & Redox Signaling, 17. pp. 1215-1231. ISSN 1523-0864
Crack, Jason, Hutchings, Matthew, Thomson, Andrew and Le Brun, Nicolas (2016) Biochemical properties of Paracoccus denitrificans FnrP:Reactions with molecular oxygen and nitric oxide. JBIC Journal of Biological Inorganic Chemistry, 21 (1). pp. 71-82. ISSN 0949-8257
Crack, Jason, Svistunenko, Dimitri A., Munnoch, John, Thomson, Andrew, Hutchings, Matthew and Le Brun, Nicolas (2016) Differentiated, promoter-specific response of [4Fe-4S] NsrR DNA-binding to reaction with nitric oxide. Journal of Biological Chemistry, 291. pp. 8663-8672. ISSN 0021-9258
Curson, ARJ, Fowler, EK, Dickens, S, Johnston, AWB and Todd, JD (2012) Multiple DMSP lyases in the γ-proteobacterium Oceanimonas doudoroffii. Biogeochemistry, 110 (1-3). pp. 109-119. ISSN 0168-2563
Curson, ARJ, Rogers, R, Todd, JD, Brearley, CA and Johnston, AWB (2008) Molecular genetic analysis of a dimethylsulfoniopropionate lyase that liberates the climate-changing gas dimethylsulfide in several marine a-proteobacteria and Rhodobacter sphaeroides. Environmental Microbiology, 10 (3). pp. 757-767. ISSN 1462-2920
Curson, ARJ, Sullivan, MJ, Todd, JD and Johnston, AWB (2011) DddY, a periplasmic dimethylsulfoniopropionate lyase found in taxonomically diverse species of Proteobacteria. The ISME Journal, 5 (7). pp. 1191-1200. ISSN 1751-7362
Curson, ARJ, Sullivan, MJ, Todd, JD and Johnston, AWB (2009) Identification of genes for dimethyl sulfide production in bacteria in the gut of Atlantic Herring (Clupea harengus). ISME, 4 (1). pp. 144-146.
Curson, ARJ, Todd, JD, Sullivan, MJ and Johnston, AWB (2011) Catabolism of dimethylsulphoniopropionate: microorganisms, enzymes and genes. Nature Reviews Microbiology, 9 (12). pp. 849-859. ISSN 1740-1526
Curson, Andrew R. J., Burns, Oliver J., Voget, Sonja, Daniel, Rolf, Todd, Jonathan D., McInnis, Kathryn, Wexler, Margaret and Johnston, Andrew W. B. (2014) Screening of Metagenomic and Genomic Libraries Reveals Three Classes of Bacterial Enzymes That Overcome the Toxicity of Acrylate. PLoS ONE, 9 (5). ISSN 1932-6203
Curson, Andrew R. J., Liu, Ji, Bermejo Martinez, Ana, Green, Robert T., Chan, Yohan, Carrión, Ornella, Williams, Beth T., Zhang, Sheng-Hui, Yang, Gui-Peng, Bulman Page, Philip C., Zhang, Xiao-Hua and Todd, Jonathan D. (2017) Dimethylsulfoniopropionate biosynthesis in marine bacteria and identification of the key gene in this process. Nature Microbiology, 2. ISSN 2058-5276
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Dalton, KA, Thibessard, A, Hunter, JI and Kelemen, GH (2007) A novel compartment, the 'subqpical stem' of the aerial hyphae, is the location of a sigN-dependent, developmentally distinct transcription in Streptomyces coelicolor. Molecular Microbiology, 64 (3). pp. 719-737. ISSN 1365-2958
Davies, Jonathan A., Clarke, Thomas A. and Butt, Julea N. (2017) Making Connections: An Amphiphilic Ferrocene Stimulates Bacterial Electricity Production. Chem, 2 (2). pp. 164-167.
De Luca, N.G., Wexler, M., Pereira, M.J., Yeoman, K.H. and Johnston, Andy (1998) Is the fur gene of Rhizobium leguminosarum essential? FEMS Microbiology Letters, 168 (2). pp. 289-295. ISSN 0378-1097
Debieux, CM, Dridge, EJ, Mueller, CM, Splatt, P, Paszkiewicz, K, Knight, I, Florance, H, Love, J, Titball, RW, Lewis, RJ, Richardson, DJ and Butler, CS (2011) A bacterial process for selenium nanosphere assembly. Proceedings of the National Academy of Sciences, 108 (33). pp. 13480-13485. ISSN 0027-8424
Diaz-Mireles, E., Wexler, M., Sawers, G., Bellini, D., Todd, J.D. and Johnston, A.W.B. (2004) The Fur-like protein Mur of Rhizobium leguminosarum is a Mn2+ responsive transcriptional regulator. Microbiology, 150. pp. 1447-1456. ISSN 1465-2080
Diaz-Mireles, E., Wexler, M., Todd, J.D., Bellini, D., Johnston, A.W.B. and Sawers, R.G. (2005) The manganese-responsie repressor Mur of Rhizobium leguminosarum is a member of the Fur-superfamily that recognizes and unusual operator sequence. Microbiology, 151. pp. 4071-4078. ISSN 1465-2080
Ditkowski, B, Holmes, Neil, Rydzak, J, Donczew, M, Bezulska, M, Ginda, K, Kedzierski, P, Zakrzewska-Czerwinska, J, Kelemen, Gabriella and Jakimowicz, D (2013) Dynamic interplay of ParA with the polarity protein, Scy, coordinates growth with chromosome segregation in Streptomyces coelicolor. Open Biology, 3 (3). ISSN 2046-2441
Doyle, Rose-Marie A.S., Richardson, David J., Clarke, Thomas A. and Butt, Julea N. (2013) Freely diffusing versus adsorbed protein: Which better mimics the cellular state of a redox protein? Electrochimica Acta, 110. pp. 73-78. ISSN 0013-4686
Dridge, E.J., Richardson, D.J., Lewis, R.J. and Butler, C.S. (2006) Developing structure-based models to predict substrate specificity of D-group (Type II) molybdenum enzymes: Application to a molybdo-enzyme of unknown function from Archaeoglobus fulgidus. Biochemical Society Transactions, 34. pp. 118-121. ISSN 1470-8752
Dridge, E.J., Watts, C.A., Jepson, B.J., Line, K., Santini, J.M., Richardson, D.J. and Butler, C.S. (2007) Investigation of the redox centres of periplasmic selenate reductase from Thauera selenatis by EPR spectroscopy. Biochemical Journal, 408(1). pp. 19-28.
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Echalier, A, Brittain, T, Wright, T, Boycheva, S, Mortuza, GB, Fulop, V and Watmough, NJ (2008) Redox-linked structural changes associated with the formation of a catalytically competent form of the dihaem cytochrome c peroxidase from Pseudomonas aeruginosa. Biochemistry, 47 (7). pp. 1947-1956.
Etzold, Sabrina, Kober, Olivia I., Mackenzie, Donald A., Tailford, Louise E., Gunning, A. Patrick, Walshaw, John, Hemmings, Andrew M. and Juge, Nathalie (2014) Structural basis for adaptation of lactobacilli to gastrointestinal mucus. Environmental Microbiology, 16 (3). pp. 888-903. ISSN 1462-2912
Etzold, Sabrina, Mackenzie, Donald A., Jeffers, Faye, Walshaw, John, Roos, Stefan, Hemmings, Andrew M. and Juge, Nathalie (2014) Structural and molecular insights into novel surface-exposed mucus adhesins from Lactobacillus reuteri human strains:A novel mucus adhesin from Lactobacillus reuteri. Molecular Microbiology, 92 (3). pp. 543-556. ISSN 0950-382X
Eyice, Özge, Myronova, Nataliia, Pol, Arjan, Carrión, Ornella, Todd, Jonathan, Smith, Tom J., Gurman, Stephen J., Cuthbertson, Adam, Mazard, Sophie, Mennink-Kersten, Monique A.S.H., Bugg, Timothy D.H., Andersson, K. Kristoffer, Johnston, Andrew W.B., Op den Camp, Huub J. M. and Schäfer, Hendrik (2017) Bacterial SBP56 identified as a Cu-dependent methanethiol oxidase widely distributed in the biosphere. The ISME Journal, 12. 145–160. ISSN 1751-7362
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Ferretti, S, Paynter, S, Russell, DA, Sapsford, KE and Richardson, DJ (2000) Self-assembled monolayers: a versatile tool for the formulation of bio-surfaces. TrAC Trends in Analytical Chemistry, 19 (9). pp. 530-540.
Ferretti, S, Russell, DA, Sapsford, KE, Lee, S-K, MacCraith, BD, Oliva, AG, Vidal, M and Richardson, DJ (2000) Optical biosensing of nitrite ions using cytochrome cd1 nitrite reductase encapsulated in a sol–gel matrix. The Analyst, 125 (11). pp. 1993-1999.
Field, S, Roldan, MD, Marritt, SJ, Butt, J, Richardson, D and Watmough, N (2011) Electron transfer to the active site of the bacterial nitric oxide reductase is controlled by ligand binding to heme b3. Biochimica et Biophysica Acta (BBA) - Bioenergetics, 1807 (4). pp. 451-457.
Field, S. J., Prior, Louise, Dolores Roldan, M, Cheesman, Myles, Thomson, Andrew J., Spiro, Stephen, Butt, Julea, Watmough, Nick and Richardson, David (2002) Spectral Properties of Bacterial Nitric-oxide Reductase. RESOLUTION OF pH-DEPENDENT FORMS OF THE ACTIVE SITE HEME b3. The Journal of Biological Chemistry, 277 (23). pp. 20146-20150. ISSN 1083-351X
Field, SJ, Thorndycroft, FH, Matorin, AD, Richardson, DJ and Watmough, NJ (2008) The Paracoccus denitrificans respiratory NO reductase (NorBC). Methods in Enzymology, 437. pp. 79-101. ISSN 1557-7988
Field, Sarah, Ryden, Peter, Wilson, David C, James, Stephen A., Roberts, Ian, Richardson, David, Waldron, Keith and Clarke, Tom (2015) Identification of furfural resistant strains of Saccharomyces cerevisiae and Saccharomyces paradoxus from a collection of environmental and industrial isolates. Biotechnology for Biofuels, 8. ISSN 1754-6834
Flock, U., Lachmann, P., Reimann, J., Watmough, N.J. and Adelroth, P. (2009) Exploring the terminal region of the proton pathway in the bacterial nitric oxide reductase. Journal of Inorganic Biochemistry, 103. pp. 845-850.
Flock, U., Watmough, N.J. and Adelroth, P. (2005) Electron/proton coupling in bacterial nitric oxide reductase during reduction of oxygen. Biochemistry, 44. pp. 10711-10719.
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Gaimster, Hannah, Chalklen, Lisa, Alston, Mark, Munnoch, John T., Richardson, David J., Gates, Andrew J. and Rowley, Gary (2016) Genome-Wide Discovery of Putative sRNAs in Paracoccus denitrificans Expressed under Nitrous Oxide Emitting Conditions. Frontiers in Microbiology, 7. ISSN 1664-302X
Gao, Hong, Grüschow, Sabine, Barke, Jörg, Seipke, Ryan F., Hill, Lionel M., Orivel, Jérôme, Yu, Douglas W., Hutchings, Matthew and Goss, Rebecca J. M. (2014) Filipins: the first antifungal “weed killers” identified from bacteria isolated from the trap-ant. RSC Advances, 4 (100). pp. 57267-57270. ISSN 2046-2069
Gao, Shu-Hong, Yuan Ho, Jun, Fan, Lu, Richardson, David J., Yuan, Zhiguo and Bond, Philip L. (2016) Antimicrobial effects of free nitrous acid on Desulfovibrio vulgaris: Implications for sulfide-induced corrosion of concrete. Applied and Environmental Microbiology, 82 (18). pp. 5563-5575. ISSN 0099-2240
Gates, AJ, Butler, CS, Richardson, DJ and Butt, JN (2011) Electrocatalytic reduction of nitrate and selenate by NapAB. Biochemical Society Transactions, 39 (1). pp. 236-242. ISSN 0300-5127
Gates, AJ, Kemp, GL, To, CY, Mann, J, Marritt, SJ, Mayes, AG, Richardson, DJ and Butt, JN (2011) The relationship between redox enzyme activity and electrochemical potential—cellular and mechanistic implications from protein film electrochemistry. Physical Chemistry Chemical Physics, 13 (17). pp. 7720-7731. ISSN 1463-9076
Gates, AJ, Richardson, DJ and Butt, JN (2008) Voltammetric characterization of the aerobic energy-dissipating nitrate reductase of Paracoccus pantotrophus: exploring the activity of a redox-balancing enzyme as a function of electrochemical potential. Biochemical Journal, 409 (1). pp. 159-168. ISSN 0264-6021
Gates, Andrew J, Marritt, Sophie J, Bradley, Justin M, Shi, Liang, McMillan, Duncan G G, Jeuken, Lars J C, Richardson, David J and Butt, Julea N (2013) Electrode assemblies composed of redox cascades from microbial respiratory electron transfer chains. Biochemical Society Transactions, 41 (5). pp. 1249-1253. ISSN 1470-8752
Gonzalez, G., Dioum, E. M., Bertolucci, C. M., Tomita, T., Ikeda-Saito, M., Cheesman, M. R., Watmough, Nick and Gilles-Gonzalez, M. A. (2002) Nature of the displaceable heme-axial residue in the EcDos protein, a heme-based sensor from Escherichia coli. Biochemistry, 41 (26). pp. 8414-8421. ISSN 0006-2960
Gorna, AE, Bowater, RP and Dziadek, J (2010) DNA repair systems and the pathogenesis of Mycobacterium tuberculosis: varying activities at different stages of infection. Clinical Science, 119 (5). pp. 187-202. ISSN 0143-5221
Green, RT, Todd, JD and Johnston, AWB (2013) Manganese uptake in marine bacteria; the novel MntX transporter is widespread in Roseobacters, Vibrios, Alteromonadales and the SAR11 and SAR116 clades. The ISME Journal, 7 (3). pp. 581-591. ISSN 1751-7362
Grenga, Lucia, Chandra, Govind, Saalbach, Gerhard, Galmozzi, Carla V., Kramer, Günter and Malone, Jacob G. (2017) Analyzing the Complex Regulatory Landscape of Hfq – an Integrative, Multi-Omics Approach. Frontiers in Microbiology, 8. ISSN 1664-302X
Grönberg, Karin L. C., Roldán, M. Dolores, Prior, Louise, Butland, Gareth, Cheesman, Myles R., Richardson, David J., Spiro, Stephen, Thomson, Andrew J. and Watmough, Nicholas J. (1999) A low-redox potential heme in the dinuclear center of bacterial nitric oxide reductase: Implications for the evolution of energy-conserving heme−copper oxidases. Biochemistry, 38 (42). pp. 13780-13786. ISSN 0006-2960
Gwyer, J, Angove, H, Richardson, D.J. and Butt, Julea (2004) Redox-triggered events in cytochrome c nitrite reductase. Bioelectrochemistry, 63 (1-2). pp. 43-47. ISSN 1878-562X
Gwyer, J, Zhang, J, Butt, Julea and Ulstrupy, J (2006) Voltammetry and In Situ Scanning Tunneling Microscopy of Cytochrome c Nitrite Reductase on Au(111) Electrodes. Biophysical Journal, 91 (10). pp. 3897-3906. ISSN 0006-3495
Gwyer, J.D., Richardson, D.J. and Butt, J.N. (2006) Inhibiting Escherichia coli cytochrome c nitrite reductase: voltammetry reveals an enzyme equipped for action despite the chemical challenges it may face in vivo. Biochemical Society Transactions, 34. pp. 133-135. ISSN 1470-8752
Gwyer, J.D., Richardson, D.J. and Butt, J.N. (2005) Resolving complexity in the interactions of redox enzymes and their inhibitors: contrasting mechanisms for the inhibition of a cytochrome c nitrite reductase revealed by protein pilm voltammetry. Biochemistry, 43 (47). pp. 15086-15094.
Gwyer, James D., Richardson, David J. and Butt, Julea (2005) Diode or Tunnel-Diode Characteristics? Resolving the Catalytic Consequences of Proton Coupled Electron Transfer in a Multi-Centered Oxidoreductase. Journal of the American Chemical Society, 127 (43). pp. 14964-14965. ISSN 0002-7863
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Hartshorne, S., Richardson, D.J. and Simon, J. (2006) Multiple haem lyase genes indicate substrate specificity in cytochrome c biogenesis. Biochemical Society Transactions, 34. pp. 146-149. ISSN 1470-8752
Heath, George R., Li, Mengqiu, Polignano, Isabelle L., Richens, Joanna, Catucci, Gianluca, O'Shea, Paul, Sadeghi, Sheila J., Gilardi, Gianfranco, Butt, Julea and Jeuken, Lars J. C. (2016) Layer-by-Layer Assembly of Supported Lipid Bilayer Poly-l-Lysine Multilayers. Biomacromolecules, 17 (1). pp. 324-335. ISSN 1525-7797
Hedges, D.H.P., Richardson, D.J. and Russell, David (2004) Electrochemical control of protein monolayers at indium tin oxide surfaces for the reagentless optical biosensing of nitric oxide. Langmuir, 20. pp. 1901-1908.
Hemmings, AM, Clarke, TA, Burlat, B, Butt, JN, Cole, JA and Richardson, DJ (2006) Comparison of the structural and kinetic properties of the cytochrome c nitrite reductases from Escherichia coli, Wolinella succinogenes, Sulfurospirillum deleyianum and Desulfovibrio desulfuricans. Biochemical Society Transactions, 34 (1). pp. 143-145. ISSN 1470-8752
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Hutton, Georgina A. M., Reuillard, Bertrand, Martindale, Benjamin C. M., Caputo, Christine A., Lockwood, Colin W. J., Butt, Julea N. and Reisner, Erwin (2016) Carbon dots as versatile photosensitizers for solar-driven catalysis with redox enzymes. Journal of the American Chemical Society, 138 (51). 16722–16730. ISSN 0002-7863
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Jenner, Leon P. and Butt, Julea N. (2018) Electrochemistry of surface-confined enzymes: Inspiration, insight and opportunity for sustainable biotechnology. Current Opinion in Electrochemistry, 8. pp. 81-88. ISSN 2451-9103
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Keeble, A.H., Hemmings, A.M., James, R., Moore, G.R. and Kleanthous, C. (2002) Multistep binding of transition metals to the H-N-H endonuclease toxin colicin E9. Biochemistry, 41. pp. 10234-10244.
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Lam, CKSCC, Jickells, TD, Richardson, DJ and Russell, DA (2006) Fluorescence-based siderophore biosensor for the determination of bioavailable iron in oceanic waters. Analytical Chemistry, 78. pp. 5040-5045. ISSN 0003-2700
Leaver, J.T., Richardson, D.J. and Butler, C.S. (2008) Enterobacter cloacae SLD1a-1 gains a selective advantage from selenate reduction when growing in nitrate-depleted anaerobic environments. Journal of Industrial Microbiology and Biotechnology, 35 (8). pp. 867-873. ISSN 1476-5535
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Lockwood, Colin, Burlat, Benedicte, Cheesman, Myles, Kern, Melanie, Simon, Jorg, Clarke, Tom, Richardson, David and Butt, Julea (2015) Resolution of Key Roles for the Distal Pocket Histidine in Cytochrome c Nitrite Reductases. Journal of the American Chemical Society, 137 (8). 3059–3068. ISSN 0002-7863
Lowe, E.C., Bydder, S., Hartshorne, R.S., Tape, H.L.U., Dridge, E.J., Debieux, C.M., Paszkiewicz, K., Singleton, I., Lewis, R.J., Santini, J.M., Richardson, David and Butler, C.S. (2010) Quinol-cytochrome c Oxidoreductase and Cytochrome c4 Mediate Electron Transfer during Selenate Respiration in Thauera selenatis. Journal of Biological Chemistry, 285 (24). pp. 18433-18442. ISSN 0021-9258
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Maillard, J., Spronk, C.A., Buchanan, G., Lyall, V., Richardson, D.J., Palmer, T., Vuister, G.W. and Sargent, F. (2007) Structural diversity in twin-arginine signal peptide-binding proteins. Proceedings of the National Academy of Sciences USA, 104 (40). pp. 15641-15646.
Majchrzak, M, Bowater, RP, Staczek, P and Parniewski, P (2006) SOS repair and DNA supercoiling influence the genetic stability of DNA triplet repeats in Escherichia coli. Journal of Molecular Biology, 364 (4). pp. 612-624. ISSN 1089-8638
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Marietou, A., Richardson, D.J., Cole, J. and Mohan, S. (2005) Nitrate reduction by Desulfovibrio desulfuricans: a periplasmic nitrate reductase system that lacks NapB, but includes a unique tetraheme c-type cytochrome, NapM. FEMS Microbiology Letters, 248. pp. 217-225. ISSN 1574-6968
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Marritt, Sophie, Van Wonderen, Jessica, Cheesman, Myles and Butt, Julea (2006) Magnetic circular dichroism of hemoproteins with in situ control of electrochemical potential: “MOTTLE”. Analytical Biochemistry, 359 (1). pp. 79-83. ISSN 1096-0309
Martinez-Espinosa, R.M., Dridge, E.J., Bonete, M.J., Butt, J.N., Butler, C.S., Sargent, F. and Richardson, D.J. (2007) Look on the positive side! The orientation, identification and bioenergetics of 'Archaeal' membrane-bound nitrate reductases. FEMS Microbiology Letters, 276 (2). pp. 129-139. ISSN 1574-6968
Martinez-Espinosa, R.M., Richardson, D.J., Butt, J.N. and Bonete, M.J. (2006) Respiratory nitrate and nitrite pathway in the denitrifier haloarchaeon Haloferax mediterranei. Biochemical Society Transactions, 34. pp. 115-117. ISSN 1470-8752
Martinez-Espinosa, R.M., Richardson, D.J., Butt, J.N. and Bonete, M.J. (2007) Spectopotentiometric properties and salt-dependent thermotolerance of a [2Fe-2S] ferredoxin-involved nitrate assimilation in Haloferax mediterranei. FEMS Microbiology Letters, 277 (1). pp. 50-55. ISSN 1574-6968
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Nguyen, Don, Melnik, Alexey, Koyama, Nobuhiro, Lu, Xiaowen, Schorn, Michelle, Fang, Jinshu, Aguinaldo, Kristen, Lincecum Jr, Tommie, Ghequire, Maarten, Carrion, Victor, Cheng, Tina, Duggan, Brendan, Malone, Jacob, Mauchline, Tim, Sanchez, Laura, Kilpatrick, A. Marm, Raaijmakers, Jos, De Mot, Rene, Moore, Bradley, Medema, Marnix and Dorrestein, Pieter (2016) Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides. Nature Microbiology, 2. ISSN 2058-5276
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Ogilvie, LA, Hirsch, PR and Johnston, AWB (2008) Bacterial diversity of the broadwalk 'classical' winter wheat experiment in relation to long-term fertilizer inputs. Microbial Ecology, 56 (3). pp. 525-537.
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Palmer, T and Hutchings, MI (2011) Protein secretion in Streptomyces. In: Streptomyces Molecular Biology and Biotechnology. Academic Press, Caister.
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Pergolizzi, G, Butt, JN, Bowater, RP and Wagner, GK (2011) A novel fluorescent probe for NAD-consuming enzymes. Chemical Communications, 47 (47). pp. 12655-12657. ISSN 1359-7345
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Pitcher, R.S. and Watmough, N.J. (2004) The bacterial cytochrome cbb3 oxidases. Biochimica et Biophysica Acta - Bioenergetics, 1655. pp. 388-399.
Pitts, K., Dobbin, P.S.D., Reyes-Ramirez, F., Thomson, A.J., Richardson, D.J. and Seward, H. (2003) Characterization of the Shewanella oneidensis MR-1 decaheme cytochrome MtrA: expression in Escherichia coli confers the ability to reduce soluble Fe(III) chelates. Journal of Biological Chemistry, 278. pp. 27758-27765. ISSN 1083-351X
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Poock, S.R., Leach, E.R., Moir, J.W.B., Cole, J.A. and Richardson, D.J. (2002) Respiratory detoxification of nitric oxide by the cytochrome c nitrite reductase of Escherichia coli. Journal of Biological Chemistry, 277 (26). pp. 23664-23669. ISSN 0021-9258
Potter, L., Angrove, H., Richardson, D.J. and Cole, J. (2001) Nitrate reduction in the periplasm of gram-negative bacteria. Advances in Microbial Physiology, 45. pp. 51-112.
Prior, K., Hautefort, I., Hinton, J.C.D., Richardson, D.J. and Rowley, G. (2009) All Stressed Out. Salmonella Pathogenesis and Reactive Nitrogen Species. Advances in Microbial Physiology, 56. pp. 1-28.
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Rajagopal, Badri S., Edzuma, Ann N., Hough, Michael A., Blundell, Katie L. I. M., Kagan, Valerian E., Kapralov, Alexandr A., Fraser, Lewis A., Butt, Julea, Silkstone, Gary G., Wilson, Michael T., Svistunenko, Dimitri A. and Worrall, Jonathan A. R. (2013) The hydrogen-peroxide-induced radical behaviour in human cytochrome c–phospholipid complexes: implications for the enhanced pro-apoptotic activity of the G41S mutant. Biochemical Journal, 456 (3). pp. 441-452. ISSN 0264-6021
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Reddy, K, Tam, M, Bowater, RP, Barber, M, Tomlinson, M, Nichol Edamura, K, Wang, Y-H and Pearson, CE (2011) Determinants of R-loop formation at convergent bidirectionally transcribed trinucleotide repeats. Nucleic Acids Research, 39 (5). pp. 1749-1762. ISSN 0305-1048
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Ridley, H., Watts, C.A., Richardson, D.J. and Butler, C.S. (2006) Development of a viologen-based microtiter plate assay for the analysis of oxyanion reductase activity: Application to the membrane-bound selenate reductase from Enterobacter cloacae SLD1a-1. Analytical Biochemistry, 358. pp. 289-294. ISSN 1096-0309
Ridley, H., Watts, C.A., Richardson, D.J. and Butler, C.S. (2006) Resolution of distinct membrane-bound enzymes from Enterobacter cloacae SLD1a-1 that are responsible for selective reduction of nitrate and selenate oxyanions. Applied and Environmental Microbiology, 72. pp. 5173-5180.
Rodionov, D.A., Gelfand, M.S., Todd, J.D., Curson, A.R.J. and Johnston, A.W.B. (2006) Computational reconstruction of iron- and manganese-responsive transcriptional networks in alpha-proteobacteria. PLoS Computational Biology, 2 (12). ISSN 1553-7358
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Rowley, G, Hensen, D, Felgate, H, Arkenberg, A, Appia‑Ayme, C, Prior, K, Harrington, C, Field, SJ, Butt, JN, Baggs, E and Richardson, DJ (2012) Resolving the contributions of the membrane-bound and periplasmic nitrate reductase systems to nitric oxide and nitrous oxide production in Salmonella enterica serovar Typhimurium. Biochemical Journal, 441 (2). pp. 755-762. ISSN 0264-6021
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Sakowicz, T, Bowater, R and Parniewski, P (2004) Isolation, cloning and characterisation of motifs containing (GA/TC)n rpeeats from vetch, Vicia bithynica. Cellular and Molecular Biology Letters, 9. pp. 557-566. ISSN 1689-1392
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Shi, Liang, Richardson, David, Wang, Zheming, Kerisit, Sebastien N., Rosso, Kevin M., Zachara, John M. and Fredrickson, James K. (2009) The roles of outer membrane cytochromes of Shewanella and Geobacterin extracellular electron transfer. Environmental Microbiology Reports, 1 (4). pp. 220-227. ISSN 1758-2229
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Simpson, P. J. L., Richardson, David and Codd, R. (2010) The periplasmic nitrate reductase in Shewanella: the resolution, distribution and functional implications of two NAP isoforms, NapEDABC and NapDAGHB. Microbiology, 156 (2). pp. 302-312. ISSN 1350-0872
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Singleton, Chloe, Hearnshaw, Stephen, Zhou, Liang, Le Brun, Nick and Hemmings, Andrew (2009) Mechanistic insights into Cu(I) cluster transfer between the chaperone CopZ and its cognate Cu(I)-transporting P-type ATPase, CopA. Biochemical Journal, 424 (3). pp. 347-356. ISSN 0264-6021
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Southall, S.M., Doel, J.J., Richardson, D.J. and Oubrie, A. (2006) Soluble aldose sugar dehydrogenase from Escherichia coli - A highly exposed active site conferring broad substrate specificity. Journal of Biological Chemistry, 281. pp. 30650-30659. ISSN 1083-351X
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Stejskalová, Eva, Horáková, Petra, Vacek, Jan, Bowater, Richard P. and Fojta, Miroslav (2014) Enzyme-linked electrochemical DNA ligation assay using magnetic beads. Analytical and Bioanalytical Chemistry, 406 (17). pp. 4129-4136. ISSN 1618-2642
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Stremińska, MA, Felgate, H, Rowley, G, Richardson, DJ and Baggs, EM (2012) Nitrous oxide production in soil isolates of nitrate-ammonifying bacteria. Environmental Microbiology Reports, 4 (1). pp. 66-71. ISSN 1758-2229
Sullivan, MJ, Curson, ARJ, Shearer, N, Todd, JD, Green, RT and Johnston, AWB (2011) Unusual regulation of a leaderless operon involved in the catabolism of dimethylsulfoniopropionate in Rhodobacter sphaeroides. PLoS ONE, 6 (1). ISSN 1932-6203
Sullivan, Matthew J, Gates, Andrew J, Appia-Ayme, Corinne, Rowley, Gary and Richardson, David J (2013) Copper control of bacterial nitrous oxide emission and its impact on vitamin B12-dependent metabolism. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 110 (49). pp. 19926-31. ISSN 1091-6490
Sun, L, Curson, ARJ, Todd, JD and Johnston, AWB (2012) Diversity of DMSP transport in marine bacteria, revealed by genetic analyses. Biogeochemistry, 110 (1-3). pp. 121-130. ISSN 0168-2563
Sutcliffe, I.C. and Hutchings, M.I. (2007) Putative lipoproteins identified by bioinformatic genome analysis of Leifsonia xyli spp xyli, the causative agent of sugarcane ratoon stunting disease. Molecular Plant Pathology, 8. pp. 121-128. ISSN 1364-3703
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Tani, Akiko, Thomson, Andrew J. and Butt, Julea (2001) Methylene blue as an electrochemical discriminator of single- and double-stranded oligonucleotides immobilised on gold substrates. The Analyst, 126 (10). pp. 1756-1759.
Tawfiq Alkafaf, N.K., Yeoman, K.H., Wexler, M., Hussain, H. and Johnston, Andy (1997) Analysis of a Rhizobium leguminosarum gene encoding a protein homologous to glutathione S-transferases. Microbiology, 143 (3). pp. 813-822. ISSN 1350-0872
Taylor, C, Russell, David, Bain, Lindsey A, Richardson, David J and Spiro, Stephen (2004) Construction of a whole-cell gene reporter for the fluorescent bioassay of nitrate. Analytical Biochemistry, 328 (1). pp. 60-66. ISSN 1096-0309
Terpolilli, Jason J., Masakapalli, Shyam K., Karunakaran, Ramakrishnan, Webb, Isabel U. C., Green, Rob, Watmough, Nicholas J., Kruger, Nicholas J., Ratcliffe, R. George and Poole, Philip S. (2016) Lipogenesis and redox balance in nitrogen-fixing pea bacteroids. Journal of Bacteriology, 198 (20). pp. 2864-2875. ISSN 0021-9193
Thorndycroft, F.H., Butland, G., Richardson, D.J. and Watmough, N.J. (2007) A new assay for nitric oxide reductase reveals two conserved glutamate residues form the entrance to a proton-conducting channel in the bacterial enzyme. Biochemical Journal, 401 (1). pp. 111-119. ISSN 0264-6021
Todd, J, Curson, A, Nikolaidou-Katsaraidou, N, Brearley, C, Watmough, N, Chan, Y, Bulman Page, P, Sun, L and Johnston, AWB (2010) Molecular dissection of bacterial acrylate catabolism - unexpected links with dimethylsulfoniopropionate catabolism and dimethyl sulfide production. Environmental Microbiology, 12 (2). pp. 327-343. ISSN 1462-2920
Todd, J.D., Sawers, G. and Johnston, A.W.B. (2005) Proteomic analysis reveals the wide-ranging effects of the novel, iron-responsive regulator RirA in Rhizobium leguminosarum bv. Viciae. Molecular Genetics and Genomics, 273 (2). pp. 197-206. ISSN 1617-4615
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Usselman, R.J., Fielding, A.J., Frerman, F.E., Watmough, N.J., Eaton, G.R. and Eaton, S.S. (2008) Impact of Mutations on the Midpoint Potential of the [4Fe-4S]+1,+2 Cluster and on Catalytic Activity in Electron Transfer Flavoprotein-ubiquinone Oxidoreductase (ETF-QO). Biochemistry, 47. pp. 92-100.
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Van Wonderen, J, Burlat, B, Richardson, DJ, Cheesman, M and Butt, JN (2008) The nitric oxide reductase activity of cytochrome c nitrite reductase from Escherichia coli. Journal of Biological Chemistry, 283 (15). pp. 9587-9594. ISSN 1083-351X
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Yeoman, K.H., Curson, A.R.J., Todd, J.D., Sawers, G. and Johnston, A.W.B. (2004) Evidence that the Rhizobium regulatory protein rirA binds to cis-acting iron-responsive operators (IROs) at promoters of some Fe-regulated genes. Microbiology, 150 (12). pp. 4065-4074. ISSN 1350-0872
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Zafrilla, B, Martínez‑Espinosa, RM, Bonete, MJ, Butt, JN, Richardson, DJ and Gates, AJ (2011) A haloarchaeal ferredoxin electron donor that plays an essential role in nitrate assimilation. Biochemical Society Transactions, 39 (6). pp. 1844-1848. ISSN 0300-5127
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