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Bailey, A. M., Constantinidou, C., Ivens, A., Garvey, M. I., Webber, M. A., Coldham, N., Hobman, J. L., Wain, J., Woodward, M. J. and Piddock, L. J. V. (2009) Exposure of Escherichia coli and Salmonella enterica serovar Typhimurium to triclosan induces a species-specific response, including drug detoxification. Journal of Antimicrobial Chemotherapy, 64 (5). pp. 973-985. ISSN 0305-7453

Bates, M, O'Grady, J, Mudenda, V, Shibemba, A and Zumla, A (2012) New Global Estimates of Malaria Deaths. The Lancet, 380 (9841). pp. 560-561.

Bates, Matthew, Ahmed, Yusuf, Chilukutu, Lophina, Tembo, John, Cheelo, Busiku, Sinyangwe, Sylvester, Kapata, Nathan, Maeurer, Markus, O'Grady, Justin, Mwaba, Peter and Zumla, Alimuddin (2013) Use of the Xpert MTB/RIF assay for diagnosing pulmonary tuberculosis comorbidity and multidrug-resistant TB in obstetrics and gynaecology inpatient wards at the University Teaching Hospital, Lusaka, Zambia. Tropical Medicine & International Health, 18 (9). pp. 1134-40. ISSN 1365-3156

Bidula, Stefan and Schelenz, Silke (2016) A sweet response to a sour situation: The role of soluble pattern recognition receptors in the innate immune response to invasive Aspergillus fumigatus infections. PLoS Pathogens, 12 (7). ISSN 1553-7374

Bidula, Stefan, Sexton, Darren W. and Schelenz, Silke (2016) Serum opsonin ficolin-A enhances host–fungal interactions and modulates cytokine expression from human monocyte-derived macrophages and neutrophils following Aspergillus fumigatus challenge. Medical Microbiology and Immunology, 205 (2). pp. 133-142. ISSN 0300-8584


Chattaway, Marie Anne, Jenkins, Claire, Ciesielczuk, Holly, Day, Martin, DoNascimento, Vivienne, Day, Michaela, Rodríguez, Irene, van Essen-Zandbergen, Alieda, Schink, Anne-Kathrin, Wu, Guanghui, Threlfall, John, Woodward, Martin J, Coldham, Nick, Kadlec, Kristina, Schwarz, Stefan, Dierikx, Cindy, Guerra, Beatriz, Helmuth, Reiner, Mevius, Dik, Woodford, Neil and Wain, John (2014) Evidence of Evolving Extraintestinal Enteroaggregative Escherichia coli ST38 Clone. Emerging Infectious Diseases, 20 (11). pp. 1935-7. ISSN 1080-6059

Cooke, F. J., Ginwalla, S., Hampton, M. D., Wain, J., Ross-Russell, R., Lever, A. and Farrington, M. (2009) Report of Neonatal Meningitis Due to Salmonella enterica Serotype Agona and Review of Breast Milk-Associated Neonatal Salmonella Infections. Journal of Clinical Microbiology, 47 (9). pp. 3045-3049. ISSN 0095-1137

Crump, John A. and Wain, John (2017) Salmonella. In: International Encyclopedia of Public Health. Elsevier, pp. 425-433. ISBN 9780128037089

Cummings, I, O'Grady, J, Pai, V, Kolvekar, S and Zumla, A (2012) Surgery and Tuberculosis. Current Opinion in Pulmonary Medicine, 18 (3). pp. 241-245. ISSN 1070-5287


Dallman, Timothy J, Byrne, Lisa, Ashton, Philip M., Cowley, Lauren A, Perry, Neil T, Adak, Goutam, Petrovska, Liljana, Ellis, Richard J, Elson, Richard, Underwood, Anthony, Green, Jonathan, Hanage, William P, Jenkins, Claire, Grant, Kathie and Wain, John (2015) Whole-genome sequencing for national surveillance of Shiga toxin–producing Escherichia coli O157. Clinical Infectious Diseases, 61 (3). pp. 305-312. ISSN 1058-4838

Day, Michaela J., Rodríguez, Irene, Van Essen-zandbergen, Alieda, Dierikx, Cindy, Kadlec, Kristina, Schink, Anne-kathrin, Wu, Guanghui, Chattaway, Marie A., Donascimento, Vivienne, Wain, John, Helmuth, Reiner, Guerra, Beatriz, Schwarz, Stefan, Threlfall, John, Woodward, Martin J., Coldham, Nick, Mevius, Dik and Woodford, Neil (2016) Diversity of STs, plasmids and ESBL genes among Escherichia coli from humans, animals and food in Germany, the Netherlands and the UK. Journal of Antimicrobial Chemotherapy, 71 (5). pp. 1178-1182. ISSN 0305-7453

Donoghue, Helen D, Michael Taylor, G, Marcsik, Antónia, Molnár, Erika, Pálfi, Gyorgy, Pap, Ildikó, Teschler-Nicola, Maria, Pinhasi, Ron, Erdal, Yilmaz S, Velemínsky, Petr, Likovsky, Jakub, Belcastro, Maria Giovanna, Mariotti, Valentina, Riga, Alessandro, Rubini, Mauro, Zaio, Paola, Besra, Gurdyal S, Lee, Oona Y-C, Wu, Houdini H T, Minnikin, David E, Bull, Ian D, O'Grady, Justin and Spigelman, Mark (2015) A migration-driven model for the historical spread of leprosy in medieval Eastern and Central Europe. Infection, Genetics and Evolution, 31. pp. 250-256. ISSN 1567-7257

Donoghue, Helen D, Spigelman, Mark, O'Grady, Justin, Szikossy, Ildikó, Pap, Ildikó, Lee, Oona Y-C, Wu, Houdini H T, Besra, Gurdyal S and Minnikin, David E (2015) Ancient DNA analysis - An established technique in charting the evolution of tuberculosis and leprosy. Tuberculosis, 95 (1). S140-S144. ISSN 1873-281X

Dorai-Raj, S, O'Grady, Justin and Colleran, E (2009) Specificity and Sensitivity Evaluation of Novel and Existing Bacteroidales and Bifidobacteria-specific PCR Assays on Feces and Sewage Samples and Their Application for Microbial Source-Tracking in Ireland. Water Research, 43 (19). pp. 4980-4988. ISSN 1879-2448

Doyle, M., Fookes, M., Ivens, A., Mangan, M. W., Wain, J. and Dorman, C. J. (2007) An H-NS-like Stealth Protein Aids Horizontal DNA Transmission in Bacteria. Science, 315 (5809). pp. 251-252. ISSN 0036-8075


Han, K. H., Choi, S. Y., Lee, J. H., Lee, H., Shin, E. H., Agtini, M. D., von Seidlein, L., Ochiai, R. L., Clemens, J. D., Wain, J., Hahn, J.-S., Lee, B. K., Song, M., Chun, J. and Kim, D. W. (2006) Isolation of Salmonella enterica subspecies enterica serovar Paratyphi B dT+, or Salmonella Java, from Indonesia and alteration of the d-tartrate fermentation phenotype by disrupting the ORF STM 3356. Journal of Medical Microbiology, 55 (12). pp. 1661-1665. ISSN 0022-2615

Heist, R. S., Marshall, A. L., Liu, G., Zhou, W., Su, L., Neuberg, D., Lynch, T. J., Wain, J and Christiani, D. C. (2006) Matrix Metalloproteinase Polymorphisms and Survival in Stage I Non-Small Cell Lung Cancer. Clinical Cancer Research, 12 (18). pp. 5448-5453. ISSN 1078-0432

Hill-Cawthorne, Grant A, Schelenz, Silke, Lawes, Matthew and Dervisevic, Samir (2010) Oseltamivir-resistant pandemic (H1N1) 2009 in patient with impaired immune system. Emerging Infectious Diseases, 16 (7). pp. 1185-1186. ISSN 1080-6059


Iademarco, MF, O'Grady, J and Lönnroth, K (2012) Chest Radiography for Tuberculosis Screening is Back on the Agenda. International Journal of Tuberculosis and Lung Disease, 16 (11). pp. 1421-1422. ISSN 1815-7920


Jarand, Julie, Shean, Karen, O’Donnell, Max, Loveday, Marian, Kvasnovsky, Charlotte, Van der Walt, Martie, Adams, Shahieda, Willcox, Paul, O'Grady, Justin, Zumla, Alimuddin and Dheda, Keertan (2010) Extensively drug-resistant tuberculosis (XDR-TB) among health care workers in South Africa. Tropical Medicine & International Health, 15 (10). pp. 1179-1184. ISSN 1365-3156


McNerney, Ruth, Ferrara, Giovanni, O'Grady, Justin, Maeurer, Markus and Zumla, Alimuddin (2011) Screening of immigrants in the UK for latent tuberculosis. Expert Review of Respiratory Medicine, 5 (4). pp. 483-486. ISSN 1747-6348

Migliori, Giovanni Battista, Dheda, Keertan, Centis, Rosella, Mwaba, Peter, Bates, Matthew, O'Grady, Justin, Hoelscher, Michael and Zumla, Alimuddin (2010) Review of multidrug-resistant and extensively drug-resistant TB: global perspectives with a focus on sub-Saharan Africa. Tropical Medicine & International Health, 15 (9). pp. 1052-1066. ISSN 1365-3156

Molloy, A., Nair, S., Cooke, F. J., Wain, J., Farrington, M., Lehner, P. J. and Torok, M. E. (2010) First Report of Salmonella enterica Serotype Paratyphi A Azithromycin Resistance Leading to Treatment Failure. Journal of Clinical Microbiology, 48 (12). pp. 4655-4657. ISSN 0095-1137

Mwaba, Peter, McNerney, Ruth, Grobusch, Martin Peter, O'Grady, Justin, Bates, Matthew, Kapata, Nathan, Maeurer, Markus and Zumla, Alimuddin (2011) Achieving STOP TB Partnership Goals: Perspectives on Development of New Diagnostics, Drugs and Vaccines for Tuberculosis. Tropical Medicine & International Health, 16 (7). pp. 819-827. ISSN 1365-3156

Mwaigwisya, Solomon, Assiri, Rasha Assad M and O'Grady, Justin (2015) Emerging commercial molecular tests for the diagnosis of bloodstream infection. Expert Review of Molecular Diagnostics, 15 (5). pp. 681-692. ISSN 1744-8352


Nadon, C A, Trees, E, Ng, L K, Møller Nielsen, E, Reimer, A, Maxwell, N, Kubota, K A, Gerner-Smidt, P, , MLVA Harmonization Working Group and Wain, John (2013) Development and application of MLVA methods as a tool for inter-laboratory surveillance. Eurosurveillance, 18 (35). ISSN 1560-7917

Nair, Satheesh, Wain, John, Connell, Steve, de Pinna, Elizabeth and Peters, Tansy (2014) Salmonella enterica subspecies II infections in England and Wales--the use of multilocus sequence typing to assist serovar identification. Journal of Medical Microbiology, 63 (Pt 6). pp. 831-4. ISSN 0022-2615


O'Grady, Justin, Kik, Sandra V and Ferrara, Giovanni (2015) Extra-pulmonary tuberculosis and Xpert® MTB/RIF:all about meta-analyses? International Journal of Tuberculosis and Lung Disease, 19 (3). p. 254. ISSN 1027-3719

O'Grady, Justin, Maeurer, Markus, Mwaba, Peter, Kapata, Nathan, Bates, Matthew, Hoelscher, Michael and Zumla, Alimuddin (2011) New and Improved Diagnostics for Detection of Drug-Resistant Pulmonary Tuberculosis. Current Opinion in Pulmonary Medicine, 17 (3). pp. 134-141. ISSN 1070-5287

O'Grady, Justin, Mwaba, Peter, Bates, Matthew, Kapata, Nathan and Zumla, Alimuddin (2011) Tuberculosis in prisons in sub-Saharan Africa--a potential time bomb. South African Medical Journal, 101 (2). pp. 107-108. ISSN 0256-9574

O'Grady, Justin, Mwaba, Peter and Zumla, Alimuddin (2011) The health of prisoners. The Lancet, 377 (9782). p. 2001.

O'Grady, Justin, Ruttledge, Margaret, Sedano-Balbás, Sara, Smith, Terry J, Barry, Thomas and Maher, Majella (2009) Rapid detection of Listeria monocytogenes in food using culture enrichment combined with real-time PCR. Food Microbiology, 26 (1). pp. 4-7. ISSN 0740-0020

O'Grady, Justin, Sedano-Balbás, Sara, Maher, Majella, Smith, Terry and Barry, Thomas (2008) Rapid real-time PCR detection of Listeria monocytogenes in enriched food samples based on the ssrA gene, a novel diagnostic target. Food Microbiology, 25 (1). pp. 75-84. ISSN 0740-0020

Okeke, IN and Wain, J (2008) Post-genomic challenges for collaborative research in infectious diseases. Nature Reviews Microbiology, 6 (11). pp. 854-864. ISSN 1740-1526

Ozongwu, C., Personne, Y., Platt, G., Jeanes, C., Aydin, S., Kozato, N., Gant, V., O'Grady, J. and Enne, V.I. (2017) The Unyvero P55 ‘sample-in, answer-out’ pneumonia assay: A performance evaluation. Biomolecular Detection and Quantification, 13. pp. 1-6. ISSN 2214-7535


Paglietti, Bianca, Falchi, Giovanni, Mason, Peter, Chitsatso, Owen, Nair, Satheesh, Gwanzura, Lovemore, Uzzau, Sergio, Cappuccinelli, Piero, Wain, John and Rubino, Salvatore (2013) Diversity among human non-typhoidal salmonellae isolates from Zimbabwe. Transactions of the Royal Society of Tropical Medicine and Hygiene, 107 (8). pp. 487-92. ISSN 0035-9203

Parry, Christopher M, Thompson, Corinne, Vinh, Ha, Chinh, Nguyen Tran, Phuong, Le Thi, Ho, Vo Anh, Hien, Tran Tinh, Wain, John, Farrar, Jeremy J and Baker, Stephen (2014) Risk factors for the development of severe typhoid fever in Vietnam. BMC Infectious Diseases, 14. ISSN 1471-2334

Pearson, Bruce M, Rokney, Assaf, Crossman, Lisa C, Miller, William G, Wain, John and van Vliet, Arnoud H M (2013) Complete Genome Sequence of the Campylobacter coli Clinical Isolate 15-537360. Genome Announcements, 1 (6). ISSN 2169-8287

Polepole, Pascal, Kabwe, Mwila, Kasonde, Mpanga, Tembo, John, Shibemba, Aaron, O'Grady, Justin, Kapata, Nathan, Zumla, Alimuddin and Bates, Matthew (2017) Performance of the Xpert MTB/RIF assay in the diagnosis of tuberculosis in formalin-fixed, paraffin-embedded tissues. International Journal of Mycobacteriology, 6 (1). pp. 87-93. ISSN 2212-5531


Ricci, V, Loman, N, Pallen, M, Ivens, A, Fookes, M, Langridge, GC, Wain, J and Piddock, LJV (2012) The TCA cycle is not required for selection or survival of multidrug-resistant Salmonella. Journal of Antimicrobial Chemotherapy, 67 (3). pp. 589-599. ISSN 0305-7453


Schelenz, S (2015) Immunity to fungi. In: Infection and Immunity. 2nd Edition. Oxford University Press.

Schelenz, S (2008) Management of candidiasis in the intensive care unit. Journal of Antimicrobial Chemotherapy, 61 (supplement 1). pp. 31-4. ISSN 1460-2091

Schelenz, S, Bramham, K and Goldsmith, D (2007) Septic arthritis due to extended spectrum beta lactamase producing Klebsiella pneumoniae. Joint Bone Spine, 74 (3). pp. 275-278. ISSN 1778-7254

Schelenz, S, Giles, D and Abdallah, S (2012) Epidemiology, management and economic impact of febrile neutropenia in oncology patients receiving routine care at a regional UK cancer centre. Annals of Oncology, 23 (7). pp. 1889-1893. ISSN 0923-7534

Schelenz, S and Goldsmith, DJA (2003) Aspergillus endophthalmitis: an unusual complication of disseminated infection in renal transplant patients. Journal of Infection, 47. pp. 336-343. ISSN 1532-2742

Schelenz, S and Grandsen, W R (2003) Candidaemia in a London teaching hospital: analysis of 128 cases over a 7 year period. Mycoses, 46 (9-10). pp. 390-396. ISSN 1439-0507

Schelenz, S, Kirchhof, N, Bidula, S, Wallis, R and Sexton, DW (2013) Opsonizing properties of rat ficolin-A in the defence against Cryptococcus neoformans. Immunobiology, 218 (4). pp. 477-83. ISSN 1878-3279

Schelenz, S and Watson, N (2005) Diagnosis and treatment of fungal endophthalmitis: a reassessment. Clinical Infectious Diseases, 41 (2). pp. 274-275. ISSN 1537-6591


Tamayo, Eduardo, Almansa, Raquel, Carrasco, Elena, Avila-Alonso, Ana, Rodríguez-Fernández, Ana, Wain, John, Heredia, María, Gomez-Sanchez, Esther, Soria, Susana, Rico, Lucia, Iglesias, Verónica, Martínez-Martínez, Angel, Andaluz-Ojeda, David, Herreras, Jose Ignacio Gómez, Eiros, Jose Maria and Bermejo-Martin, Jesús F (2014) Quantification of IgM molecular response by droplet digital PCR as a potential tool for the early diagnosis of sepsis. Critical Care, 18 (3). p. 433. ISSN 1466-609X

Turner, A. K., Nair, S and Wain, J (2006) The acquisition of full fluoroquinolone resistance in Salmonella Typhi by accumulation of point mutations in the topoisomerase targets. Journal of Antimicrobial Chemotherapy, 58 (4). pp. 733-740. ISSN 0305-7453


Vinh, Ha, Duong, Nguyen Minh, Phuong, Le Thi, Truong, Nguyen Thanh, Bay, Phan Van Be, Wain, J, Diep, To Song, Ho, Vo Anh, White, Nicholas J., Day, Nicholas P.J. and Parry, Christopher M. (2005) Comparative trial of short-course ofloxacin for uncomplicated typhoid fever in Vietnamese children. Annals of Tropical Paediatrics: International Child Health, 25 (1). pp. 17-22.


Wain, John, Keddy, Karen H, Hendriksen, Rene S and Rubino, Salvatore (2013) Using next generation sequencing to tackle non-typhoidal Salmonella infections. Journal of Infection in Developing Countries, 7 (01). pp. 1-5. ISSN 1972-2680

Wain, John and Mavrogiorgou, Eleni (2013) Next-generation sequencing in clinical microbiology. Expert Review of Molecular Diagnostics, 13 (3). pp. 225-227. ISSN 1744-8352

Wallace-Gadsden, F, Johnson, JR, Wain, J and Okeke, IN (2007) Enteroaggregative Escherichia coli related to uropathogenic clonal group A. Emerging Infectious Diseases, 13 (5). pp. 757-760. ISSN 1080-6040

Webber, M. A., Bailey, A. M., Blair, J. M. A., Morgan, E., Stevens, M. P., Hinton, J. C. D., Ivens, A., Wain, J. and Piddock, L. J. V. (2009) The Global Consequence of Disruption of the AcrAB-TolC Efflux Pump in Salmonella enterica Includes Reduced Expression of SPI-1 and Other Attributes Required To Infect the Host. Journal of Bacteriology, 191 (13). pp. 4276-4285. ISSN 0021-9193


Zhou, Zhemin, McCann, Angela, Weill, François-Xavier, Blin, Camille, Nair, Satheesh, Wain, John, Dougan, Gordon and Achtman, Mark (2014) Transient Darwinian selection in Salmonella enterica serovar Paratyphi A during 450 years of global spread of enteric fever. Proceedings of the National Academy of Sciences of the United States of America (PNAS), 111 (33). pp. 12199-204. ISSN 1091-6490

Zumla, Alimuddin, Atun, Rifat, Maeurer, Markus, Mwaba, Peter, Ma, Zhenkun, O'Grady, Justin, Bates, Matthew, Dheda, Keertan, Hoelscher, Michael and Grange, John (2011) Viewpoint: Scientific dogmas, paradoxes and mysteries of latent Mycobacterium tuberculosis infection. Tropical Medicine & International Health, 16 (1). pp. 79-83. ISSN 1365-3156


Évinger, S, Bernert, Z, Fóthi, E, Wolff, K, Kővári, I, Marcsik, A, Donoghue, HD, O'Grady, J, Kiss, KK and Hajdu, T (2011) New skeletal tuberculosis cases in past populations from Western Hungary (Transdanubia). HOMO - Journal of Comparative Human Biology, 62 (3). pp. 165-183.

This list was generated on Wed May 22 04:36:00 2019 BST.