Speak, Samuel A. ORCID: https://orcid.org/0000-0002-4207-7562, Birley, Thomas, Bortoluzzi, Chiara, Clark, Matthew D., Percival-Alwyn, Lawrence, Morales, Hernán E. and van Oosterhout, Cock
ORCID: https://orcid.org/0000-0002-5653-738X
(2024)
Genomics‐informed captive breeding can reduce inbreeding depression and the genetic load in zoo populations.
Molecular Ecology Resources.
ISSN 1755-098X
Clark, M. S., Hoffman, J. I., Peck, L. S., Bargelloni, L., Gande, D., Havermans, C., Meyer, B., Patarnello, T., Phillips, T., Stoof-leichsenring, K. R., Vendrami, D. L. J., Beck, A., Collins, G., Friedrich, M. W., Halanych, K. M., Masello, J. F., Nagel, R., Norén, K., Printzen, C., Ruiz, M. B., Wohlrab, S., Becker, B., Dumack, K., Ghaderiardakani, F., Glaser, K., Heesch, S., Held, C., John, U., Karsten, U., Kempf, S., Lucassen, M., Paijmans, A., Schimani, K., Wallberg, A., Wunder, L. C. and Mock, T. ORCID: https://orcid.org/0000-0001-9604-0362
(2023)
Multi-omics for studying and understanding polar life.
Nature Communications, 14 (1).
ISSN 2041-1723
Walkowiak, Sean, Gao, Liangliang, Monat, Cecile, Haberer, Georg, Kassa, Mulualem T., Brinton, Jemima, Ramirez-Gonzalez, Ricardo H., Kolodziej, Markus C., Delorean, Emily, Thambugala, Dinushika, Klymiuk, Valentyna, Byrns, Brook, Gundlach, Heidrun, Bandi, Venkat, Siri, Jorge Nunez, Nilsen, Kirby, Aquino, Catharine, Himmelbach, Axel, Copetti, Dario, Ban, Tomohiro, Venturini, Luca, Bevan, Michael, Clavijo, Bernardo, Koo, Dal-Hoe, Ens, Jennifer, Wiebe, Krystalee, N’diaye, Amidou, Fritz, Allen K., Gutwin, Carl, Fiebig, Anne, Fosker, Christine, Fu, Bin Xiao, Accinelli, Gonzalo Garcia, Gardner, Keith A., Fradgley, Nick, Gutierrez-Gonzalez, Juan, Halstead-Nussloch, Gwyneth, Hatakeyama, Masaomi, Koh, Chu Shin, Deek, Jasline, Costamagna, Alejandro C., Fobert, Pierre, Heavens, Darren, Kanamori, Hiroyuki, Kawaura, Kanako, Kobayashi, Fuminori, Krasileva, Ksenia, Kuo, Tony, McKenzie, Neil, Murata, Kazuki, Nabeka, Yusuke, Paape, Timothy, Padmarasu, Sudharsan, Percival-Alwyn, Lawrence, Kagale, Sateesh, Scholz, Uwe, Sese, Jun, Juliana, Philomin, Singh, Ravi, Shimizu-Inatsugi, Rie, Swarbreck, David, Cockram, James, Budak, Hikmet, Tameshige, Toshiaki, Tanaka, Tsuyoshi, Tsuji, Hiroyuki, Wright, Jonathan, Wu, Jianzhong, Steuernagel, Burkhard, Small, Ian, Cloutier, Sylvie, Keeble-Gagnère, Gabriel, Muehlbauer, Gary, Tibbets, Josquin, Nasuda, Shuhei, Melonek, Joanna, Hucl, Pierre J., Sharpe, Andrew G., Clark, Matthew, Legg, Erik, Bharti, Arvind, Langridge, Peter, Hall, Anthony ORCID: https://orcid.org/0000-0002-1806-020X, Uauy, Cristobal, Mascher, Martin, Krattinger, Simon G., Handa, Hirokazu, Shimizu, Kentaro K., Distelfeld, Assaf, Chalmers, Ken, Keller, Beat, Mayer, Klaus F. X., Poland, Jesse, Stein, Nils, Mccartney, Curt A., Spannagl, Manuel, Wicker, Thomas and Pozniak, Curtis J.
(2020)
Multiple wheat genomes reveal global variation in modern breeding.
Nature, 588 (7837).
pp. 277-283.
ISSN 0028-0836
Paajanen, Pirita, Kettleborough, George, López-Girona, Elena, Giolai, Michael, Heavens, Darren, Baker, David, Lister, Ashleigh, Cugliandolo, Fiorella, Wilde, Gail, Hein, Ingo, MacAulay, Iain, Bryan, Glenn J. and Clark, Matthew D. (2019) A critical comparison of technologies for a plant genome sequencing project. GigaScience, 8 (3). ISSN 2047-217X
McMullan, Mark, Rafiqi, Maryam, Kaithakottil, Gemy, Clavijo, Bernardo J., Bilham, Lorelei, Orton, Elizabeth, Percival-Alwyn, Lawrence, Ward, Ben J., Edwards, Anne, Saunders, Diane G.O., Garcia Accinelli, Gonzalo, Wright, Jonathan, Verweij, Walter, Koutsovoulos, Georgios, Yoshida, Kentaro, Hosoya, Tsuyoshi, Williamson, Louisa, Jennings, Philip, Ioos, Renaud, Husson, Claude, Hietala, Ari M., Vivian-Smith, Adam, Solheim, Halvor, MaCclean, Dan, Fosker, Christine, Hall, Neil ORCID: https://orcid.org/0000-0003-2808-0009, Brown, James K. M., Swarbreck, David, Blaxter, Mark, Downie, J. Allan and Clark, Matthew D.
(2018)
The ash dieback invasion of Europe was founded by two genetically divergent individuals.
Nature Ecology and Evolution, 2 (6).
pp. 1000-1008.
ISSN 2397-334X
Paajanen, Pirita, Strauss, Jan, van Oosterhout, Cock ORCID: https://orcid.org/0000-0002-5653-738X, McMullan, Mark, Clark, Matthew D. and Mock, Thomas
ORCID: https://orcid.org/0000-0001-9604-0362
(2017)
Building a locally diploid genome and transcriptome of the diatom Fragilariopsis cylindrus.
Scientific Data, 4.
ISSN 2052-4463
Giolai, Michael, Paajanen, Pirita, Verweij, Walter, Witek, Kamil, Jones, Jonathan D. G. and Clark, Matthew D. (2017) Comparative analysis of targeted long read sequencing approaches for characterization of a plant’s immune receptor repertoire. BMC Genomics, 18. ISSN 1471-2164
Clavijo, Bernardo J., Venturini, Luca, Schudoma, Christian, Accinelli, Gonzalo Garcia, Kaithakottil, Gemy, Wright, Jonathan, Borrill, Philippa, Kettleborough, George, Heavens, Darren, Chapman, Helen, Lipscombe, James, Barker, Tom, Lu, Fu-Hao, McKenzie, Neil, Raats, Dina, Ramirez-Gonzalez, Ricardo H., Coince, Aurore, Peel, Ned, Percival-Alwyn, Lawrence, Duncan, Owen, Trösch, Josua, Yu, Guotai, Bolser, Dan M., Namaati, Guy, Kerhornou, Arnaud, Spannagl, Manuel, Gundlach, Heidrun, Haberer, Georg, Davey, Robert P., Fosker, Christine, Palma, Federica Di, Phillips, Andrew L., Millar, A. Harvey, Kersey, Paul J., Uauy, Cristobal, Krasileva, Ksenia V., Swarbreck, David, Bevan, Michael W. and Clark, Matthew D. (2017) An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations. Genome Research, 27 (5). pp. 885-896. ISSN 1088-9051
Beier, Sebastian, Himmelbach, Axel, Colmsee, Christian, Zhang, Xiao-Qi, Barrero, Roberto A., Zhang, Qisen, Li, Lin, Bayer, Micha, Bolser, Daniel, Taudien, Stefan, Groth, Marco, Felder, Marius, Hastie, Alex, Šimková, Hana, Staňková, Helena, Vrána, Jan, Chan, Saki, Muñoz-Amatriaín, María, Ounit, Rachid, Wanamaker, Steve, Schmutzer, Thomas, Aliyeva-Schnorr, Lala, Grasso, Stefano, Tanskanen, Jaakko, Sampath, Dharanya, Heavens, Darren, Cao, Sujie, Chapman, Brett, Dai, Fei, Han, Yong, Li, Hua, Li, Xuan, Lin, Chongyun, McCooke, John K., Tan, Cong, Wang, Songbo, Yin, Shuya, Zhou, Gaofeng, Poland, Jesse A., Bellgard, Matthew I., Houben, Andreas, Doležel, Jaroslav, Ayling, Sarah, Lonardi, Stefano, Langridge, Peter, Muehlbauer, Gary J., Kersey, Paul, Clark, Matthew D., Caccamo, Mario, Schulman, Alan H., Platzer, Matthias, Close, Timothy J., Hansson, Mats, Zhang, Guoping, Braumann, Ilka, Li, Chengdao, Waugh, Robbie, Scholz, Uwe, Stein, Nils and Mascher, Martin (2017) Construction of a map-based reference genome sequence for barley, Hordeum vulgare L. Scientific Data, 4. ISSN 2052-4463
Bevan, Michael W., Uauy, Cristobal, Wulff, Brande B H, Zhou, Ji, Krasileva, Ksenia and Clark, Matthew D (2017) Genomic innovation for crop improvement. Nature, 543 (7645). pp. 346-354. ISSN 0028-0836
Mock, Thomas ORCID: https://orcid.org/0000-0001-9604-0362, Otillar, Robert P., Strauss, Jan, McMullan, Mark, Paajanen, Pirita, Schmutz, Jeremy, Salamov, Asaf, Sanges, Remo, Toseland, Andrew, Ward, Ben J., Allen, Andrew E., Dupont, Christopher L., Frickenhaus, Stephan, Maumus, Florian, Veluchamy, Alaguraj, Wu, Taoyang
ORCID: https://orcid.org/0000-0002-2663-2001, Barry, Kerrie W., Falciatore, Angela, Ferrante, Maria I., Fortunato, Antonio E., Glöckner, Gernot, Gruber, Ansgar, Hipkin, Rachel, Janech, Michael G., Kroth, Peter G., Leese, Florian, Lindquist, Erika A., Lyon, Barbara R., Martin, Joel, Mayer, Christoph, Parker, Micaela, Quesneville, Hadi, Raymond, James A., Uhlig, Christiane, Valas, Ruben E., Valentin, Klaus U., Worden, Alexandra Z., Armbrust, E. Virginia, Clark, Matthew D., Bowler, Chris, Green, Beverley R., Moulton, Vincent
ORCID: https://orcid.org/0000-0001-9371-6435, van Oosterhout, Cock
ORCID: https://orcid.org/0000-0002-5653-738X and Grigoriev, Igor V.
(2017)
Evolutionary genomics of a cold-adapted diatom: Fragilariopsis cylindrus.
Nature, 541.
536–540.
ISSN 0028-0836
Rallapalli, Ghanasyam, Players, Fraxinus, Saunders, Diane Go, Yoshida, Kentaro, Edwards, Anne, Lugo, Carlos A., Collin, Steve, Clavijo, Bernardo, Corpas, Manuel, Swarbreck, David, Clark, Matthew, Downie, J. Allan, Kamoun, Sophien ORCID: https://orcid.org/0000-0002-0290-0315 and MacLean, Dan
and
Team Cooper
(2015)
Lessons from fraxinus, a crowd-sourced citizen science game in genomics.
eLife, 4.
ISSN 2050-084X