Mathematical modeling of genome replication

Retkute, Renata, Nieduszynski, Conrad A. ORCID: https://orcid.org/0000-0003-2001-076X and De Moura, Alessandro (2012) Mathematical modeling of genome replication. Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, 86 (3). ISSN 1539-3755

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Abstract

Eukaryotic DNA replication is initiated from multiple sites on the chromosome, but little is known about the global and local regulation of replication. We present a mathematical model for the spatial dynamics of DNA replication, which offers insight into the kinetics of replication in different types of organisms. Most biological experiments involve average quantities over large cell populations (typically >107 cells) and therefore can mask the cell-to-cell variability present in the system. Although the model is formulated in terms of a population of cells, using mathematical analysis we show that one can obtain signatures of stochasticity in individual cells from averaged quantities. This work generalizes the result by Retkute et al. to a broader set of parameter regimes.

Item Type: Article
Uncontrolled Keywords: statistical and nonlinear physics,statistics and probability,condensed matter physics ,/dk/atira/pure/subjectarea/asjc/3100/3109
Faculty \ School: Faculty of Science > School of Biological Sciences
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Depositing User: LivePure Connector
Date Deposited: 08 Sep 2022 08:30
Last Modified: 23 Sep 2022 02:47
URI: https://ueaeprints.uea.ac.uk/id/eprint/87889
DOI: 10.1103/PhysRevE.86.031916

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