The Metaproteomics Initiative: five years of community-driven progress

Van Den Bossche, Tim, Grenga, Lucia, Alves, Gelio, Arntzen, Magnus, Benndorf, Dirk, Brauer, Madita, Figeys, Daniel ORCID: https://orcid.org/0000-0002-5373-7546, Henry, Celine, Hettich, Robert L., Heyer, Robert, Jagtap, Pratik D., Jehmlich, Nico, Kleiner, Manuel, Li, Leyuan, Mesuere, Bart, Pabst, Martin, Pandhal, Jagroop, Pope, Phillip B., Seifert, Jana, Trautwein-Schult, Anke, Verschaffelt, Pieter, Wilmes, Paul, Armengaud, Jean and Kunath, Benoit J. (2026) The Metaproteomics Initiative: five years of community-driven progress. Microbiome, 14 (1). ISSN 2049-2618

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Abstract

The Metaproteomics Initiative was officially launched in 2021 to strengthen collaboration, promote knowledge exchange, and support and lead standardization efforts within the growing metaproteomics community. Over the past 5 years, the Initiative has developed into a structured, global network of researchers. It has launched community-driven benchmark studies, helped shape emerging metadata and reporting standards, developed practical guidance and training materials, organized international symposia, and fostered connections across the microbiome research landscape (https://metaproteomics.org/). We outline the Initiative’s organization, activities, achievements, and ongoing efforts, and reflect on how sustained, community-led coordination has shaped the development of metaproteomics as a field. We further position the Grand Metaproteome Challenges as a next step toward coordinated, community-scale biological research, aimed at advancing functional microbiome studies across clinical, industrial, and environmental application domains, and invite engagement from the wider microbiome and omics communities.

Item Type: Article
Additional Information: Publisher Copyright: © The Author(s) 2026.
Uncontrolled Keywords: microbiology,microbiology (medical) ,/dk/atira/pure/subjectarea/asjc/2400/2404
Faculty \ School: Faculty of Medicine and Health Sciences > Norwich Medical School
UEA Research Groups: Faculty of Medicine and Health Sciences > Research Centres > Metabolic Health
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Depositing User: LivePure Connector
Date Deposited: 07 Aug 2026 08:26
Last Modified: 09 Aug 2026 05:38
URI: https://ueaeprints.uea.ac.uk/id/eprint/104030
DOI: 10.1186/s40168-026-02463-0

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