Rapid loss of MHC class II variation in a bottlenecked population is explained by drift and loss of copy number variation

Eimes, J. A., Bollmer, J. L., Whittingham, L. A., Johnson, J. A., Van Oosterhout, C. ORCID: https://orcid.org/0000-0002-5653-738X and Dunn, P. O. (2011) Rapid loss of MHC class II variation in a bottlenecked population is explained by drift and loss of copy number variation. Journal of Evolutionary Biology, 24 (9). pp. 1847-1856. ISSN 1010-061X

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Abstract

Population bottlenecks may reduce genetic variation and potentially increase the risk of extinction. Here, we present the first study to use historic samples to analyse loss of variation at the major histocompatibility complex (MHC), which plays a central role in vertebrate disease resistance. Balancing selection acts on the MHC and could moderate the loss of variation expected from drift; however, in a Wisconsin population of greater prairie-chickens (Tympanuchus cupido), the number of MHC class II B alleles per individual declined by 44% following a population bottleneck, compared to a loss of only 8% at microsatellites. Simulations indicate that drift likely reduced MHC variation at the population level, as well as within individuals by reducing the number of gene copies per individual or by fixing the same alleles across multiple loci. These multiple effects of genetic drift on MHC variation could have important implications for immunity and fitness.

Item Type: Article
Uncontrolled Keywords: bottleneck,copy number variation,genetic drift,major histocompatibility complex,selection,tympanuchus cupido,ecology, evolution, behavior and systematics ,/dk/atira/pure/subjectarea/asjc/1100/1105
Faculty \ School: Faculty of Science > School of Environmental Sciences
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Depositing User: LivePure Connector
Date Deposited: 04 Aug 2026 16:47
Last Modified: 04 Aug 2026 16:47
URI: https://ueaeprints.uea.ac.uk/id/eprint/103985
DOI: 10.1111/j.1420-9101.2011.02311.x

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